data_Q61
#

_chem_comp.id                                   Q61
_chem_comp.name                                 "guanosine-5'-monophosphate-2',3'-vanadate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H12 N5 O10 P V"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-24
_chem_comp.pdbx_modified_date                   2019-12-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       444.145
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q61
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       6UEY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q61  "C1'"  C1   C  0  1  N  N  R  215.562  140.779  139.206  ?  ?  ?  "C1'"  Q61   1  
Q61  C2     C2   C  0  1  N  N  N  212.897  143.264  141.586  ?  ?  ?  C2     Q61   2  
Q61  "C2'"  C3   C  0  1  N  N  R  215.130  140.300  137.811  ?  ?  ?  "C2'"  Q61   3  
Q61  "C3'"  C4   C  0  1  N  N  R  216.232  139.349  137.355  ?  ?  ?  "C3'"  Q61   4  
Q61  C4     C5   C  0  1  Y  N  N  214.700  142.944  140.137  ?  ?  ?  C4     Q61   5  
Q61  "C4'"  C6   C  0  1  N  N  R  217.328  139.442  138.410  ?  ?  ?  "C4'"  Q61   6  
Q61  C5     C7   C  0  1  Y  N  N  215.016  144.349  140.021  ?  ?  ?  C5     Q61   7  
Q61  "C5'"  C8   C  0  1  N  N  N  218.602  140.122  137.957  ?  ?  ?  "C5'"  Q61   8  
Q61  C6     C9   C  0  1  N  N  N  214.193  145.335  140.766  ?  ?  ?  C6     Q61   9  
Q61  C8     C10  C  0  1  Y  N  N  216.500  143.273  138.749  ?  ?  ?  C8     Q61  10  
Q61  N1     N1   N  0  1  N  N  N  213.123  144.686  141.543  ?  ?  ?  N1     Q61  11  
Q61  N2     N2   N  0  1  N  N  N  211.843  142.774  142.344  ?  ?  ?  N2     Q61  12  
Q61  N3     N3   N  0  1  N  N  N  213.653  142.338  140.903  ?  ?  ?  N3     Q61  13  
Q61  N7     N4   N  0  1  Y  N  N  216.162  144.549  139.148  ?  ?  ?  N7     Q61  14  
Q61  N9     N5   N  0  1  Y  N  N  215.676  142.233  139.322  ?  ?  ?  N9     Q61  15  
Q61  O1V    O1   O  0  1  N  N  N  212.826  137.811  135.997  ?  ?  ?  O1V    Q61  16  
Q61  "O2'"  O2   O  0  1  N  N  N  213.822  139.762  137.815  ?  ?  ?  "O2'"  Q61  17  
Q61  O2V    O3   O  0  1  N  N  N  212.636  137.398  138.476  ?  ?  ?  O2V    Q61  18  
Q61  "O3'"  O4   O  0  1  N  N  N  215.703  138.031  137.280  ?  ?  ?  "O3'"  Q61  19  
Q61  "O4'"  O5   O  0  1  N  N  N  216.780  140.154  139.541  ?  ?  ?  "O4'"  Q61  20  
Q61  "O5'"  O6   O  0  1  N  N  N  218.393  141.505  137.678  ?  ?  ?  "O5'"  Q61  21  
Q61  O6     O7   O  0  1  N  N  N  214.349  146.630  140.766  ?  ?  ?  O6     Q61  22  
Q61  OP1    O8   O  0  1  N  N  N  220.428  141.671  136.126  ?  ?  ?  OP1    Q61  23  
Q61  OP2    O9   O  0  1  N  N  N  218.960  143.848  136.765  ?  ?  ?  OP2    Q61  24  
Q61  P      P1   P  0  1  N  N  N  219.568  142.455  137.161  ?  ?  ?  P      Q61  25  
Q61  V      V1   V  0  1  N  N  N  213.720  137.818  137.357  ?  ?  ?  V      Q61  26  
Q61  H1     H1   H  0  1  N  N  N  214.790  140.444  139.914  ?  ?  ?  H1     Q61  27  
Q61  H2     H2   H  0  1  N  N  N  215.152  141.174  137.144  ?  ?  ?  H2     Q61  28  
Q61  H3     H3   H  0  1  N  N  N  216.625  139.676  136.381  ?  ?  ?  H3     Q61  29  
Q61  H4     H4   H  0  1  N  N  N  217.582  138.419  138.723  ?  ?  ?  H4     Q61  30  
Q61  H5     H5   H  0  1  N  N  N  218.966  139.626  137.045  ?  ?  ?  H5     Q61  31  
Q61  H6     H6   H  0  1  N  N  N  219.357  140.029  138.751  ?  ?  ?  H6     Q61  32  
Q61  H7     H7   H  0  1  N  N  N  217.311  143.068  138.066  ?  ?  ?  H7     Q61  33  
Q61  H8     H8   H  0  1  N  N  N  212.513  145.272  142.076  ?  ?  ?  H8     Q61  34  
Q61  H9     H9   H  0  1  N  N  N  211.664  141.791  142.375  ?  ?  ?  H9     Q61  35  
Q61  H10    H10  H  0  1  N  N  N  211.263  143.404  142.860  ?  ?  ?  H10    Q61  36  
Q61  H14    H14  H  0  1  N  N  N  219.209  144.061  135.873  ?  ?  ?  H14    Q61  37  
Q61  OP3    OP3  O  0  1  N  Y  N  220.517  142.663  138.439  ?  ?  ?  OP3    Q61  38  
Q61  H11    H11  H  0  1  N  N  N  221.365  142.268  138.272  ?  ?  ?  H11    Q61  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q61  O1V    V      DOUB  N  N   1  
Q61  OP1    P      DOUB  N  N   2  
Q61  OP2    P      SING  N  N   3  
Q61  P      "O5'"  SING  N  N   4  
Q61  "O3'"  "C3'"  SING  N  N   5  
Q61  "O3'"  V      SING  N  N   6  
Q61  "C3'"  "C2'"  SING  N  N   7  
Q61  "C3'"  "C4'"  SING  N  N   8  
Q61  V      "O2'"  SING  N  N   9  
Q61  V      O2V    SING  N  N  10  
Q61  "O5'"  "C5'"  SING  N  N  11  
Q61  "C2'"  "O2'"  SING  N  N  12  
Q61  "C2'"  "C1'"  SING  N  N  13  
Q61  "C5'"  "C4'"  SING  N  N  14  
Q61  "C4'"  "O4'"  SING  N  N  15  
Q61  C8     N7     DOUB  Y  N  16  
Q61  C8     N9     SING  Y  N  17  
Q61  N7     C5     SING  Y  N  18  
Q61  "C1'"  N9     SING  N  N  19  
Q61  "C1'"  "O4'"  SING  N  N  20  
Q61  N9     C4     SING  Y  N  21  
Q61  C5     C4     DOUB  Y  N  22  
Q61  C5     C6     SING  N  N  23  
Q61  C4     N3     SING  N  N  24  
Q61  O6     C6     DOUB  N  N  25  
Q61  C6     N1     SING  N  N  26  
Q61  N3     C2     DOUB  N  N  27  
Q61  N1     C2     SING  N  N  28  
Q61  C2     N2     SING  N  N  29  
Q61  "C1'"  H1     SING  N  N  30  
Q61  "C2'"  H2     SING  N  N  31  
Q61  "C3'"  H3     SING  N  N  32  
Q61  "C4'"  H4     SING  N  N  33  
Q61  "C5'"  H5     SING  N  N  34  
Q61  "C5'"  H6     SING  N  N  35  
Q61  C8     H7     SING  N  N  36  
Q61  N1     H8     SING  N  N  37  
Q61  N2     H9     SING  N  N  38  
Q61  N2     H10    SING  N  N  39  
Q61  OP2    H14    SING  N  N  40  
Q61  P      OP3    SING  N  N  41  
Q61  OP3    H11    SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q61  SMILES            ACDLabs               12.01  "C3(n2c1N=C(N)NC(c1nc2)=O)OC(C4C3O[V](=O)(O)O4)COP(=O)(O)O"  
Q61  InChI             InChI                 1.03   "InChI=1S/C10H12N5O8P.H2O.O.V/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21;;;/h2-3,5-6,9H,1H2,(H2,19,20,21)(H3,11,13,14,18);1H2;;/q-2;;;+3/p-1/t3-,5-,6-,9-;;;/m1.../s1"  
Q61  InChIKey          InChI                 1.03   HLNGULJSADVEQG-CYCLDIHTSA-M  
Q61  SMILES_CANONICAL  CACTVS                3.385  "O.NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@H]4O[V](=O)O[C@@H]34"  
Q61  SMILES            CACTVS                3.385  "O.NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[V](=O)O[CH]34"  
Q61  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc2c(n1[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(O)O)O[V](=O)(O4)[O])N=C(NC2=O)N"  
Q61  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc2c(n1C3C4C(C(O3)COP(=O)(O)O)O[V](=O)(O4)[O])N=C(NC2=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q61  "SYSTEMATIC NAME"  ACDLabs               12.01  "[5'-guanylato(2-)-kappa~2~O~2'~,O~3'~](hydroxy)oxovanadium"  
Q61  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(1~{R},5~{R},6~{R},8~{R})-8-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3-$l^{1}-oxidanyl-3-oxidanylidene-2,4,7-trioxa-3$l^{5}-vanadabicyclo[3.3.0]octan-6-yl]methyl dihydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q61  "Create component"  2019-09-24  RCSB  
Q61  "Initial release"   2019-12-18  RCSB  
##
