data_OM1
# 
_chem_comp.id                                    OM1 
_chem_comp.name                                  "(4-CARBOXY-1,3-BENZODIOXOL-5-YL)METHYL-[[2-[(4-METHOXYPHENYL)METHYLCARBAMOYL]PHENYL]METHYL]AZANIUM" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H25 N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2011-07-01 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        449.476 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OM1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ZT1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OM1 C15  C15  C 0 1 Y N N -11.422 5.628  -19.358 1.428  -4.140 -1.671 C15  OM1 1  
OM1 C16  C16  C 0 1 Y N N -12.500 6.037  -18.599 0.194  -4.681 -1.359 C16  OM1 2  
OM1 C14  C14  C 0 1 Y N N -10.347 4.992  -18.754 1.863  -2.994 -1.039 C14  OM1 3  
OM1 C17  C17  C 0 1 Y N N -12.490 5.807  -17.234 -0.613 -4.077 -0.412 C17  OM1 4  
OM1 C23  C23  C 0 1 Y N N -9.333  7.597  -12.097 -2.877 1.960  1.238  C23  OM1 5  
OM1 C6   C6   C 0 1 Y N N -5.868  6.326  -15.274 4.652  1.815  -0.631 C6   OM1 6  
OM1 C10  C10  C 0 1 Y N N -6.844  4.561  -14.018 5.668  0.484  1.083  C10  OM1 7  
OM1 C24  C24  C 0 1 Y N N -9.293  8.526  -11.066 -3.529 3.042  0.668  C24  OM1 8  
OM1 C7   C7   C 0 1 Y N N -5.671  7.056  -14.113 5.902  2.165  -1.104 C7   OM1 9  
OM1 C9   C9   C 0 1 Y N N -6.652  5.273  -12.856 6.920  0.831  0.614  C9   OM1 10 
OM1 C13  C13  C 0 1 Y N N -10.337 4.762  -17.384 1.053  -2.379 -0.082 C13  OM1 11 
OM1 C30  C30  C 0 1 Y N N -10.580 9.121  -13.514 -4.481 0.468  0.249  C30  OM1 12 
OM1 C5   C5   C 0 1 Y N N -6.455  5.075  -15.236 4.535  0.975  0.461  C5   OM1 13 
OM1 C18  C18  C 0 1 Y N N -11.424 5.175  -16.625 -0.191 -2.930 0.228  C18  OM1 14 
OM1 C22  C22  C 0 1 Y N N -9.962  7.884  -13.308 -3.343 0.680  1.035  C22  OM1 15 
OM1 C25  C25  C 0 1 Y N N -9.915  9.736  -11.285 -4.656 2.849  -0.112 C25  OM1 16 
OM1 C29  C29  C 0 1 Y N N -10.530 10.032 -12.468 -5.139 1.560  -0.327 C29  OM1 17 
OM1 C8   C8   C 0 1 Y N N -6.066  6.520  -12.901 7.040  1.673  -0.482 C8   OM1 18 
OM1 C2   C2   C 0 1 N N N -9.156  4.083  -16.786 1.513  -1.151 0.601  C2   OM1 19 
OM1 C31  C31  C 0 1 N N N -11.258 9.493  -14.796 -4.983 -0.901 0.028  C31  OM1 20 
OM1 C27  C27  C 0 1 N N N -10.565 11.805 -11.183 -6.199 2.941  -1.722 C27  OM1 21 
OM1 C12  C12  C 0 1 N N N -5.610  8.556  -11.821 9.398  1.471  -0.257 C12  OM1 22 
OM1 C4   C4   C 0 1 N N N -6.678  4.286  -16.500 3.170  0.596  0.975  C4   OM1 23 
OM1 C19  C19  C 0 1 N N N -11.500 4.974  -15.149 -1.072 -2.273 1.260  C19  OM1 24 
OM1 C21  C21  C 0 1 N N N -9.951  6.804  -14.343 -2.628 -0.491 1.658  C21  OM1 25 
OM1 N3   N3   N 0 1 N N N -7.948  4.663  -17.094 2.715  -0.622 0.299  N3   OM1 26 
OM1 N20  N20  N 1 1 N N N -11.326 6.230  -14.363 -1.769 -1.131 0.652  N20  OM1 27 
OM1 O33  O33  O 0 1 N N N -11.217 10.722 -15.121 -4.540 -1.620 -1.022 O33  OM1 28 
OM1 O1   O1   O 0 1 N N N -9.276  3.090  -16.072 0.806  -0.618 1.434  O1   OM1 29 
OM1 O32  O32  O 0 1 N N N -11.799 8.580  -15.481 -5.797 -1.380 0.793  O32  OM1 30 
OM1 O26  O26  O 0 1 N N N -9.988  10.764 -10.378 -5.462 3.732  -0.771 O26  OM1 31 
OM1 O28  O28  O 0 1 N N N -11.076 11.301 -12.440 -6.245 1.635  -1.118 O28  OM1 32 
OM1 O11  O11  O 0 1 N N N -5.925  7.167  -11.681 8.271  2.015  -0.946 O11  OM1 33 
OM1 H15  H15  H 0 1 N N N -11.415 5.803  -20.424 2.056  -4.619 -2.409 H15  OM1 34 
OM1 H16  H16  H 0 1 N N N -13.341 6.530  -19.064 -0.142 -5.579 -1.857 H16  OM1 35 
OM1 H14  H14  H 0 1 N N N -9.509  4.672  -19.355 2.827  -2.573 -1.283 H14  OM1 36 
OM1 H17  H17  H 0 1 N N N -13.330 6.127  -16.635 -1.576 -4.504 -0.173 H17  OM1 37 
OM1 H23  H23  H 0 1 N N N -8.867  6.632  -11.958 -1.995 2.121  1.841  H23  OM1 38 
OM1 H24  H24  H 0 1 N N N -8.796  8.310  -10.132 -3.155 4.042  0.834  H24  OM1 39 
OM1 H6   H6   H 0 1 N N N -5.559  6.740  -16.222 3.766  2.201  -1.112 H6   OM1 40 
OM1 H7   H7   H 0 1 N N N -5.214  8.034  -14.154 5.993  2.820  -1.957 H7   OM1 41 
OM1 H10  H10  H 0 1 N N N -7.306  3.586  -13.975 5.574  -0.172 1.936  H10  OM1 42 
OM1 H9   H9   H 0 1 N N N -6.960  4.855  -11.909 7.805  0.447  1.100  H9   OM1 43 
OM1 H41C H41C H 0 0 N N N -5.865  4.496  -17.211 3.223  0.417  2.049  H41C OM1 44 
OM1 H42C H42C H 0 0 N N N -6.689  3.212  -16.263 2.468  1.406  0.776  H42C OM1 45 
OM1 H191 H191 H 0 0 N N N -12.484 4.546  -14.907 -1.804 -2.993 1.625  H191 OM1 46 
OM1 H192 H192 H 0 0 N N N -10.710 4.267  -14.854 -0.459 -1.924 2.091  H192 OM1 47 
OM1 H211 H211 H 0 0 N N N -9.699  7.223  -15.328 -2.015 -0.142 2.489  H211 OM1 48 
OM1 H212 H212 H 0 0 N N N -9.218  6.028  -14.076 -3.359 -1.211 2.023  H212 OM1 49 
OM1 H3   H3   H 0 1 N N N -7.944  5.396  -17.775 3.279  -1.047 -0.366 H3   OM1 50 
OM1 H33  H33  H 0 1 N N N -11.655 10.844 -15.955 -4.898 -2.512 -1.125 H33  OM1 51 
OM1 H271 H271 H 0 0 N N N -11.391 12.269 -10.624 -7.206 3.339  -1.852 H271 OM1 52 
OM1 H272 H272 H 0 0 N N N -9.794  12.561 -11.391 -5.675 2.903  -2.677 H272 OM1 53 
OM1 H121 H121 H 0 0 N N N -5.511  9.012  -10.825 9.378  1.793  0.785  H121 OM1 54 
OM1 H122 H122 H 0 0 N N N -4.662  8.664  -12.369 9.361  0.382  -0.301 H122 OM1 55 
OM1 H123 H123 H 0 0 N N N -6.414  9.060  -12.377 10.316 1.822  -0.728 H123 OM1 56 
OM1 H20  H20  H 0 1 N N N -11.940 6.919  -14.748 -1.092 -0.464 0.314  H20  OM1 57 
OM1 H220 H220 H 0 0 N N N -11.591 6.039  -13.418 -2.336 -1.454 -0.117 H220 OM1 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OM1 C15 C16  SING Y N 1  
OM1 C15 C14  DOUB Y N 2  
OM1 C16 C17  DOUB Y N 3  
OM1 C14 C13  SING Y N 4  
OM1 C17 C18  SING Y N 5  
OM1 C23 C24  SING Y N 6  
OM1 C23 C22  DOUB Y N 7  
OM1 C6  C7   SING Y N 8  
OM1 C6  C5   DOUB Y N 9  
OM1 C10 C9   DOUB Y N 10 
OM1 C10 C5   SING Y N 11 
OM1 C24 C25  DOUB Y N 12 
OM1 C7  C8   DOUB Y N 13 
OM1 C9  C8   SING Y N 14 
OM1 C13 C18  DOUB Y N 15 
OM1 C13 C2   SING N N 16 
OM1 C30 C22  SING Y N 17 
OM1 C30 C29  DOUB Y N 18 
OM1 C30 C31  SING N N 19 
OM1 C5  C4   SING N N 20 
OM1 C18 C19  SING N N 21 
OM1 C22 C21  SING N N 22 
OM1 C25 C29  SING Y N 23 
OM1 C25 O26  SING N N 24 
OM1 C29 O28  SING N N 25 
OM1 C8  O11  SING N N 26 
OM1 C2  N3   SING N N 27 
OM1 C2  O1   DOUB N N 28 
OM1 C31 O33  SING N N 29 
OM1 C31 O32  DOUB N N 30 
OM1 C27 O26  SING N N 31 
OM1 C27 O28  SING N N 32 
OM1 C12 O11  SING N N 33 
OM1 C4  N3   SING N N 34 
OM1 C19 N20  SING N N 35 
OM1 C21 N20  SING N N 36 
OM1 C15 H15  SING N N 37 
OM1 C16 H16  SING N N 38 
OM1 C14 H14  SING N N 39 
OM1 C17 H17  SING N N 40 
OM1 C23 H23  SING N N 41 
OM1 C24 H24  SING N N 42 
OM1 C6  H6   SING N N 43 
OM1 C7  H7   SING N N 44 
OM1 C10 H10  SING N N 45 
OM1 C9  H9   SING N N 46 
OM1 C4  H41C SING N N 47 
OM1 C4  H42C SING N N 48 
OM1 C19 H191 SING N N 49 
OM1 C19 H192 SING N N 50 
OM1 C21 H211 SING N N 51 
OM1 C21 H212 SING N N 52 
OM1 N3  H3   SING N N 53 
OM1 O33 H33  SING N N 54 
OM1 C27 H271 SING N N 55 
OM1 C27 H272 SING N N 56 
OM1 C12 H121 SING N N 57 
OM1 C12 H122 SING N N 58 
OM1 C12 H123 SING N N 59 
OM1 N20 H20  SING N N 60 
OM1 N20 H220 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OM1 SMILES           ACDLabs              12.01 "O=C(NCc1ccc(OC)cc1)c2ccccc2C[NH2+]Cc3ccc4OCOc4c3C(=O)O"                                                                                                                  
OM1 InChI            InChI                1.03  "InChI=1S/C25H24N2O6/c1-31-19-9-6-16(7-10-19)12-27-24(28)20-5-3-2-4-17(20)13-26-14-18-8-11-21-23(33-15-32-21)22(18)25(29)30/h2-11,26H,12-15H2,1H3,(H,27,28)(H,29,30)/p+1" 
OM1 InChIKey         InChI                1.03  KFDRXOMFDTWNBI-UHFFFAOYSA-O                                                                                                                                               
OM1 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(CNC(=O)c2ccccc2C[NH2+]Cc3ccc4OCOc4c3C(O)=O)cc1"                                                                                                                  
OM1 SMILES           CACTVS               3.385 "COc1ccc(CNC(=O)c2ccccc2C[NH2+]Cc3ccc4OCOc4c3C(O)=O)cc1"                                                                                                                  
OM1 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)CNC(=O)c2ccccc2C[NH2+]Cc3ccc4c(c3C(=O)O)OCO4"                                                                                                                
OM1 SMILES           "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)CNC(=O)c2ccccc2C[NH2+]Cc3ccc4c(c3C(=O)O)OCO4"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OM1 "SYSTEMATIC NAME" ACDLabs              12.01 "(4-carboxy-1,3-benzodioxol-5-yl)-N-{2-[(4-methoxybenzyl)carbamoyl]benzyl}methanaminium"             
OM1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(4-carboxy-1,3-benzodioxol-5-yl)methyl-[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OM1 "Create component"  2011-07-01 EBI  
OM1 "Modify descriptor" 2014-09-05 RCSB 
# 
