data_NA1
#

_chem_comp.id                                   NA1
_chem_comp.name                                 2-acetamido-2-deoxy-6-O-methyl-alpha-D-allopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H17 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;METHYL N-ACETYL ALLOSAMINE; 2-(ACETYLAMINO)-2-DEOXY-6-O-METHYL-ALPHA-D-ALLOPYRANOSE;
2-acetamido-2-deoxy-6-O-methyl-alpha-D-allose; 2-acetamido-2-deoxy-6-O-methyl-D-allose;
2-acetamido-2-deoxy-6-O-methyl-allose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-03-10
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       235.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NA1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1HKJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  NA1  "METHYL N-ACETYL ALLOSAMINE"                               PDB  ?  
2  NA1  "2-(ACETYLAMINO)-2-DEOXY-6-O-METHYL-ALPHA-D-ALLOPYRANOSE"  PDB  ?  
3  NA1  2-acetamido-2-deoxy-6-O-methyl-alpha-D-allose              PDB  ?  
4  NA1  2-acetamido-2-deoxy-6-O-methyl-D-allose                    PDB  ?  
5  NA1  2-acetamido-2-deoxy-6-O-methyl-allose                      PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NA1  C1    C1    C  0  1  N  N  S   0.770  61.554  -2.123   2.047  -1.022   1.563  C1    NA1   1  
NA1  C2    C2    C  0  1  N  N  R  -0.644  61.704  -2.676   0.809  -0.219   1.977  C2    NA1   2  
NA1  C3    C3    C  0  1  N  N  S  -1.380  60.376  -2.648  -0.308  -0.449   0.953  C3    NA1   3  
NA1  C4    C4    C  0  1  N  N  S  -0.531  59.304  -3.363  -0.574  -1.939   0.717  C4    NA1   4  
NA1  C5    C5    C  0  1  N  N  R   0.858  59.227  -2.715   0.724  -2.710   0.440  C5    NA1   5  
NA1  C6    C6    C  0  1  N  N  N   1.719  58.155  -3.396   1.253  -2.504  -0.977  C6    NA1   6  
NA1  C7    C7    C  0  1  N  N  N  -1.426  64.003  -2.349  -0.232   0.324   4.177  C7    NA1   7  
NA1  C8    C8    C  0  1  N  N  N  -2.147  64.981  -1.409  -0.585  -0.254   5.507  C8    NA1   8  
NA1  N2    N2    N  0  1  N  N  N  -1.331  62.741  -1.896   0.384  -0.569   3.317  N2    NA1   9  
NA1  O1    O1    O  0  1  N  Y  N       ?       ?       ?   3.070  -0.837   2.540  O1    NA1  10  
NA1  O3    O3    O  0  1  N  N  N  -1.592  60.004  -1.294  -1.509   0.208   1.339  O3    NA1  11  
NA1  O4    O4    O  0  1  N  N  N  -1.169  58.022  -3.307  -1.174  -2.517   1.880  O4    NA1  12  
NA1  O5    O5    O  0  1  N  N  N   1.499  60.517  -2.821   1.732  -2.408   1.417  O5    NA1  13  
NA1  O6    O6    O  0  1  N  N  N   3.069  58.120  -2.855   0.276  -2.962  -1.894  O6    NA1  14  
NA1  C9    C9    C  0  1  N  N  N   3.068  57.765  -1.464   0.701  -2.801  -3.242  C9    NA1  15  
NA1  O7    O7    O  0  1  N  N  N  -1.012  64.377  -3.456  -0.496   1.496   3.938  O7    NA1  16  
NA1  H1    H1C1  H  0  1  N  N  N   1.304  62.509  -2.240   2.446  -0.647   0.614  H1    NA1  17  
NA1  H2    H2    H  0  1  N  N  N  -0.614  62.012  -3.731   1.051   0.848   2.039  H2    NA1  18  
NA1  H3    H3    H  0  1  N  N  N  -2.348  60.466  -3.163   0.002   0.001   0.001  H3    NA1  19  
NA1  H4    H4    H  0  1  N  N  N  -0.428  59.590  -4.420  -1.295  -2.074  -0.096  H4    NA1  20  
NA1  H5    H5    H  0  1  N  N  N   0.746  58.951  -1.656   0.524  -3.782   0.554  H5    NA1  21  
NA1  H61   H6C1  H  0  1  N  N  N   1.249  57.172  -3.244   2.172  -3.073  -1.117  H61   NA1  22  
NA1  H62   H6C2  H  0  1  N  N  N   1.786  58.401  -4.466   1.445  -1.446  -1.153  H62   NA1  23  
NA1  H8C1  H8C1  H  0  0  N  N  N  -3.235  64.864  -1.522  -0.102   0.281   6.340  H8C1  NA1  24  
NA1  H8C2  H8C2  H  0  0  N  N  N  -1.861  64.768  -0.368  -1.666  -0.200   5.715  H8C2  NA1  25  
NA1  H8C3  H8C3  H  0  0  N  N  N  -1.861  66.012  -1.664  -0.316  -1.313   5.648  H8C3  NA1  26  
NA1  HA    HA    H  0  1  N  N  N  -1.733  62.506  -1.017   0.546  -1.520   3.642  HA    NA1  27  
NA1  HO1   HO1   H  0  1  N  Y  N   0.881  -0.093   0.344   3.857  -0.533   2.062  HO1   NA1  28  
NA1  HO3   HB    H  0  1  N  Y  N  -2.564  59.954  -1.113  -1.869   0.614   0.537  HO3   NA1  29  
NA1  HO4   HC    H  0  1  N  Y  N  -2.152  58.141  -3.312  -1.768  -3.219   1.569  HO4   NA1  30  
NA1  H9C1  H9C1  H  0  0  N  N  N   2.031  57.674  -1.109   1.516  -2.074  -3.284  H9C1  NA1  31  
NA1  H9C2  H9C2  H  0  0  N  N  N   3.586  56.804  -1.331  -0.138  -2.457  -3.852  H9C2  NA1  32  
NA1  H9C3  H9C3  H  0  0  N  N  N   3.586  58.545  -0.887   1.054  -3.763  -3.621  H9C3  NA1  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NA1  C1  C2    SING  N  N   1  
NA1  C1  O1    SING  N  N   2  
NA1  C1  O5    SING  N  N   3  
NA1  C1  H1    SING  N  N   4  
NA1  C2  C3    SING  N  N   5  
NA1  C2  N2    SING  N  N   6  
NA1  C2  H2    SING  N  N   7  
NA1  C3  C4    SING  N  N   8  
NA1  C3  O3    SING  N  N   9  
NA1  C3  H3    SING  N  N  10  
NA1  C4  C5    SING  N  N  11  
NA1  C4  O4    SING  N  N  12  
NA1  C4  H4    SING  N  N  13  
NA1  C5  C6    SING  N  N  14  
NA1  C5  O5    SING  N  N  15  
NA1  C5  H5    SING  N  N  16  
NA1  C6  O6    SING  N  N  17  
NA1  C6  H61   SING  N  N  18  
NA1  C6  H62   SING  N  N  19  
NA1  C7  C8    SING  N  N  20  
NA1  C7  N2    SING  N  N  21  
NA1  C7  O7    DOUB  N  N  22  
NA1  C8  H8C1  SING  N  N  23  
NA1  C8  H8C2  SING  N  N  24  
NA1  C8  H8C3  SING  N  N  25  
NA1  N2  HA    SING  N  N  26  
NA1  O1  HO1   SING  N  N  27  
NA1  O3  HO3   SING  N  N  28  
NA1  O4  HO4   SING  N  N  29  
NA1  O6  C9    SING  N  N  30  
NA1  C9  H9C1  SING  N  N  31  
NA1  C9  H9C2  SING  N  N  32  
NA1  C9  H9C3  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NA1  SMILES            ACDLabs               10.04  "O=C(NC1C(O)C(O)C(OC1O)COC)C"  
NA1  SMILES_CANONICAL  CACTVS                3.341  "COC[C@H]1O[C@H](O)[C@H](NC(C)=O)[C@H](O)[C@@H]1O"  
NA1  SMILES            CACTVS                3.341  "COC[CH]1O[CH](O)[CH](NC(C)=O)[CH](O)[CH]1O"  
NA1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(=O)N[C@@H]1[C@@H]([C@@H]([C@H](O[C@@H]1O)COC)O)O"  
NA1  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(=O)NC1C(C(C(OC1O)COC)O)O"  
NA1  InChI             InChI                 1.03   "InChI=1S/C9H17NO6/c1-4(11)10-6-8(13)7(12)5(3-15-2)16-9(6)14/h5-9,12-14H,3H2,1-2H3,(H,10,11)/t5-,6-,7-,8+,9?/m1/s1"  
NA1  InChIKey          InChI                 1.03   KDTVUHXJRZVEIF-NBTWYFBKSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NA1  "SYSTEMATIC NAME"            ACDLabs               10.04  "2-(acetylamino)-2-deoxy-6-O-methyl-alpha-D-allopyranose"  
NA1  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "N-[(2S,3R,4S,5S,6R)-2,4,5-trihydroxy-6-(methoxymethyl)oxan-3-yl]ethanamide"  
NA1  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    a-D-AllpNAc6OMe  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
NA1  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
NA1  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
NA1  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
NA1  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NA1  "Create component"          2003-03-10  EBI   
NA1  "Modify descriptor"         2011-06-04  RCSB  
NA1  "Other modification"        2020-07-03  RCSB  
NA1  "Modify name"               2020-07-17  RCSB  
NA1  "Modify synonyms"           2020-07-17  RCSB  
NA1  "Modify internal type"      2020-07-17  RCSB  
NA1  "Modify linking type"       2020-07-17  RCSB  
NA1  "Modify atom id"            2020-07-17  RCSB  
NA1  "Modify component atom id"  2020-07-17  RCSB  
NA1  "Modify leaving atom flag"  2020-07-17  RCSB  
##
