data_J11
#

_chem_comp.id                                   J11
_chem_comp.name                                 "N-{(3R,4S)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H30 F N5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;N1-{(3'R,4'S)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine
tetrahydrochloride
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-09-23
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       371.495
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J11
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3JWU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J11  C1      C1      C  0  1  N  N  N  18.225   3.667  56.779   0.502  -0.957  -0.932  C1      J11   1  
J11  N1      N1      N  0  1  N  N  N  16.847   3.623  57.220  -0.687  -0.914  -0.070  N1      J11   2  
J11  C2      C2      C  0  1  N  N  N  18.770   5.093  56.765   1.711  -0.426  -0.159  C2      J11   3  
J11  N2      N2      N  0  1  N  N  N  17.741   6.056  56.411   2.900  -0.469  -1.020  N2      J11   4  
J11  C3      C3      C  0  1  N  N  N  18.158   7.341  55.894   4.083   0.034  -0.309  C3      J11   5  
J11  C4      C4      C  0  1  N  N  N  18.423   7.223  54.407   5.299  -0.025  -1.236  C4      J11   6  
J11  "N1'"   "N1'"   N  0  1  N  N  N  16.258   0.193  56.937  -2.871  -3.174   0.507  "N1'"   J11   7  
J11  C11     C11     C  0  1  Y  N  N  19.463   8.235  54.027   6.512   0.491  -0.507  C11     J11   8  
J11  N11     N11     N  0  1  Y  N  N  12.367   0.138  58.126  -6.003  -0.251   0.235  N11     J11   9  
J11  C12     C12     C  0  1  Y  N  N  19.047   9.529  53.742   7.308  -0.380   0.212  C12     J11  10  
J11  C13     C13     C  0  1  Y  N  N  19.999  10.476  53.395   8.424   0.095   0.882  C13     J11  11  
J11  F13     F13     F  0  1  N  N  N  19.588  11.720  53.124   9.203  -0.755   1.585  F13     J11  12  
J11  C14     C14     C  0  1  Y  N  N  21.351  10.135  53.325   8.740   1.442   0.829  C14     J11  13  
J11  C15     C15     C  0  1  Y  N  N  21.761   8.827  53.611   7.943   2.311   0.108  C15     J11  14  
J11  C16     C16     C  0  1  Y  N  N  20.811   7.872  53.965   6.832   1.835  -0.564  C16     J11  15  
J11  "C2'"   "C2'"   C  0  1  N  N  N  16.716   1.337  56.168  -1.963  -2.953  -0.647  "C2'"   J11  16  
J11  C21     C21     C  0  1  Y  N  N  12.713   1.422  58.414  -5.183   0.513  -0.460  C21     J11  17  
J11  "C3'"   "C3'"   C  0  1  N  N  R  15.981   2.550  56.770  -1.870  -1.418  -0.781  "C3'"   J11  18  
J11  C31     C31     C  0  1  Y  N  N  12.201   2.036  59.564  -5.399   1.873  -0.566  C31     J11  19  
J11  "C4'"   "C4'"   C  0  1  N  N  S  15.114   2.047  57.922  -3.159  -0.880  -0.125  "C4'"   J11  20  
J11  C41     C41     C  0  1  Y  N  N  11.326   1.316  60.391  -6.496   2.438   0.069  C41     J11  21  
J11  "C5'"   "C5'"   C  0  1  N  N  N  15.514   0.591  58.133  -3.921  -2.135   0.350  "C5'"   J11  22  
J11  C51     C51     C  0  1  Y  N  N  10.974   0.009  60.073  -7.339   1.612   0.791  C51     J11  23  
J11  C61     C61     C  0  1  Y  N  N  11.505  -0.562  58.905  -7.061   0.251   0.855  C61     J11  24  
J11  N61     N61     N  0  1  N  N  N  11.175  -1.829  58.559  -7.900  -0.591   1.577  N61     J11  25  
J11  C71     C71     C  0  1  N  N  N  13.660   2.193  57.517  -3.993  -0.106  -1.148  C71     J11  26  
J11  C81     C81     C  0  1  N  N  N  10.777   1.978  61.628  -6.763   3.918  -0.025  C81     J11  27  
J11  H1      H1      H  0  1  N  N  N  18.835   3.063  57.467   0.691  -1.985  -1.240  H1      J11  28  
J11  H1A     H1A     H  0  1  N  N  N  18.283   3.257  55.760   0.334  -0.339  -1.813  H1A     J11  29  
J11  HN1     HN1     H  0  1  N  N  N  16.876   3.558  58.217  -0.533  -1.428   0.785  HN1     J11  30  
J11  H2      H2      H  0  1  N  N  N  19.152   5.336  57.768   1.522   0.602   0.149  H2      J11  31  
J11  H2A     H2A     H  0  1  N  N  N  19.582   5.154  56.025   1.878  -1.045   0.723  H2A     J11  32  
J11  HN2     HN2     H  0  1  N  N  N  17.181   5.629  55.701   3.059  -1.401  -1.371  HN2     J11  33  
J11  H3      H3      H  0  1  N  N  N  17.364   8.082  56.068   3.911   1.066  -0.002  H3      J11  34  
J11  H3A     H3A     H  0  1  N  N  N  19.077   7.662  56.406   4.267  -0.581   0.571  H3A     J11  35  
J11  H4      H4      H  0  1  N  N  N  18.785   6.211  54.172   5.471  -1.057  -1.543  H4      J11  36  
J11  H4A     H4A     H  0  1  N  N  N  17.496   7.414  53.847   5.115   0.590  -2.117  H4A     J11  37  
J11  "HN1'"  "HN1'"  H  0  0  N  N  N  15.658  -0.360  56.358  -3.271  -4.100   0.481  "HN1'"  J11  38  
J11  H12     H12     H  0  1  N  N  N  18.001   9.793  53.790   7.060  -1.430   0.253  H12     J11  39  
J11  H14     H14     H  0  1  N  N  N  22.082  10.881  53.050   9.609   1.814   1.351  H14     J11  40  
J11  H15     H15     H  0  1  N  N  N  22.806   8.561  53.557   8.189   3.362   0.067  H15     J11  41  
J11  H16     H16     H  0  1  N  N  N  21.114   6.860  54.190   6.212   2.514  -1.130  H16     J11  42  
J11  "H2'"   "H2'"   H  0  1  N  N  N  17.806   1.456  56.253  -0.980  -3.377  -0.444  "H2'"   J11  43  
J11  "H2'A"  "H2'A"  H  0  0  N  N  N  16.470   1.218  55.103  -2.386  -3.388  -1.553  "H2'A"  J11  44  
J11  "H3'"   "H3'"   H  0  1  N  N  N  15.378   2.999  55.967  -1.831  -1.131  -1.832  "H3'"   J11  45  
J11  H31     H31     H  0  1  N  N  N  12.476   3.051  59.811  -4.721   2.490  -1.137  H31     J11  46  
J11  "H4'"   "H4'"   H  0  1  N  N  N  15.250   2.608  58.858  -2.913  -0.242   0.725  "H4'"   J11  47  
J11  "H5'"   "H5'"   H  0  1  N  N  N  14.622  -0.040  58.261  -4.651  -2.443  -0.399  "H5'"   J11  48  
J11  "H5'A"  "H5'A"  H  0  0  N  N  N  16.142   0.489  59.030  -4.412  -1.944   1.304  "H5'A"  J11  49  
J11  H51     H51     H  0  1  N  N  N  10.308  -0.554  60.710  -8.202   2.019   1.297  H51     J11  50  
J11  HN61    HN61    H  0  0  N  N  N  11.652  -2.080  57.717  -7.709  -1.541   1.625  HN61    J11  51  
J11  HN6A    HN6A    H  0  0  N  N  N  11.442  -2.455  59.292  -8.675  -0.228   2.032  HN6A    J11  52  
J11  H71     H71     H  0  1  N  N  N  13.548   1.814  56.490  -4.337  -0.788  -1.926  H71     J11  53  
J11  H71A    H71A    H  0  0  N  N  N  13.393   3.259  57.568  -3.383   0.678  -1.596  H71A    J11  54  
J11  H81     H81     H  0  1  N  N  N   9.835   2.491  61.383  -7.395   4.120  -0.890  H81     J11  55  
J11  H81A    H81A    H  0  0  N  N  N  10.589   1.216  62.399  -7.268   4.255   0.880  H81A    J11  56  
J11  H81B    H81B    H  0  0  N  N  N  11.506   2.710  62.006  -5.818   4.451  -0.134  H81B    J11  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J11  C1     N1      SING  N  N   1  
J11  C1     C2      SING  N  N   2  
J11  N1     "C3'"   SING  N  N   3  
J11  C2     N2      SING  N  N   4  
J11  N2     C3      SING  N  N   5  
J11  C3     C4      SING  N  N   6  
J11  C4     C11     SING  N  N   7  
J11  "N1'"  "C2'"   SING  N  N   8  
J11  "N1'"  "C5'"   SING  N  N   9  
J11  C11    C12     DOUB  Y  N  10  
J11  C11    C16     SING  Y  N  11  
J11  N11    C21     DOUB  Y  N  12  
J11  N11    C61     SING  Y  N  13  
J11  C12    C13     SING  Y  N  14  
J11  C13    F13     SING  N  N  15  
J11  C13    C14     DOUB  Y  N  16  
J11  C14    C15     SING  Y  N  17  
J11  C15    C16     DOUB  Y  N  18  
J11  "C2'"  "C3'"   SING  N  N  19  
J11  C21    C31     SING  Y  N  20  
J11  C21    C71     SING  N  N  21  
J11  "C3'"  "C4'"   SING  N  N  22  
J11  C31    C41     DOUB  Y  N  23  
J11  "C4'"  "C5'"   SING  N  N  24  
J11  "C4'"  C71     SING  N  N  25  
J11  C41    C51     SING  Y  N  26  
J11  C41    C81     SING  N  N  27  
J11  C51    C61     DOUB  Y  N  28  
J11  C61    N61     SING  N  N  29  
J11  C1     H1      SING  N  N  30  
J11  C1     H1A     SING  N  N  31  
J11  N1     HN1     SING  N  N  32  
J11  C2     H2      SING  N  N  33  
J11  C2     H2A     SING  N  N  34  
J11  N2     HN2     SING  N  N  35  
J11  C3     H3      SING  N  N  36  
J11  C3     H3A     SING  N  N  37  
J11  C4     H4      SING  N  N  38  
J11  C4     H4A     SING  N  N  39  
J11  "N1'"  "HN1'"  SING  N  N  40  
J11  C12    H12     SING  N  N  41  
J11  C14    H14     SING  N  N  42  
J11  C15    H15     SING  N  N  43  
J11  C16    H16     SING  N  N  44  
J11  "C2'"  "H2'"   SING  N  N  45  
J11  "C2'"  "H2'A"  SING  N  N  46  
J11  "C3'"  "H3'"   SING  N  N  47  
J11  C31    H31     SING  N  N  48  
J11  "C4'"  "H4'"   SING  N  N  49  
J11  "C5'"  "H5'"   SING  N  N  50  
J11  "C5'"  "H5'A"  SING  N  N  51  
J11  C51    H51     SING  N  N  52  
J11  N61    HN61    SING  N  N  53  
J11  N61    HN6A    SING  N  N  54  
J11  C71    H71     SING  N  N  55  
J11  C71    H71A    SING  N  N  56  
J11  C81    H81     SING  N  N  57  
J11  C81    H81A    SING  N  N  58  
J11  C81    H81B    SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J11  SMILES            ACDLabs               11.02  "Fc1cccc(c1)CCNCCNC2C(CNC2)Cc3nc(N)cc(c3)C"  
J11  SMILES_CANONICAL  CACTVS                3.352  "Cc1cc(N)nc(C[C@H]2CNC[C@@H]2NCCNCCc3cccc(F)c3)c1"  
J11  SMILES            CACTVS                3.352  "Cc1cc(N)nc(C[CH]2CNC[CH]2NCCNCCc3cccc(F)c3)c1"  
J11  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "Cc1cc(nc(c1)N)C[C@H]2CNC[C@@H]2NCCNCCc3cccc(c3)F"  
J11  SMILES            "OpenEye OEToolkits"  1.7.0  "Cc1cc(nc(c1)N)CC2CNCC2NCCNCCc3cccc(c3)F"  
J11  InChI             InChI                 1.03   "InChI=1S/C21H30FN5/c1-15-9-19(27-21(23)10-15)12-17-13-25-14-20(17)26-8-7-24-6-5-16-3-2-4-18(22)11-16/h2-4,9-11,17,20,24-26H,5-8,12-14H2,1H3,(H2,23,27)/t17-,20-/m0/s1"  
J11  InChIKey          InChI                 1.03   PUOKPLCASUFBAN-PXNSSMCTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J11  "SYSTEMATIC NAME"  ACDLabs               11.02  "N-{(3R,4S)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"  
J11  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "N-[(3R,4S)-4-[(6-azanyl-4-methyl-pyridin-2-yl)methyl]pyrrolidin-3-yl]-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J11  "Create component"      2009-09-23  RCSB  
J11  "Modify aromatic_flag"  2011-06-04  RCSB  
J11  "Modify descriptor"     2011-06-04  RCSB  
J11  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     J11
_pdbx_chem_comp_synonyms.name        
;N1-{(3'R,4'S)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
;

_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
