data_DU1
# 
_chem_comp.id                                    DU1 
_chem_comp.name                                  "4-{[3-(8-cyclohexyl-2,6-dioxo-1-propyl-1,2,6,7-tetrahydro-3H-purin-3-yl)propyl]carbamoyl}benzene-1-sulfonyl fluoride" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H30 F N5 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-01-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        519.589 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DU1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5UEN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DU1 O4  O1  O 0 1 N N N N N N 52.650 56.364 141.333 2.394  -3.455 -1.207 O4  DU1 1  
DU1 C3  C1  C 0 1 N N N N N N 53.106 57.470 141.105 3.065  -2.558 -0.735 C3  DU1 2  
DU1 N1  N1  N 0 1 N N N N N N 54.253 57.929 141.750 2.770  -1.282 -1.050 N1  DU1 3  
DU1 C14 C2  C 0 1 Y N N N N N 54.748 59.197 141.457 3.523  -0.245 -0.524 C14 DU1 4  
DU1 C22 C3  C 0 1 Y N N N N N 54.131 60.010 140.545 4.578  -0.547 0.328  C22 DU1 5  
DU1 N4  N2  N 0 1 Y N N N N N 54.900 61.144 140.538 5.138  0.661  0.692  N4  DU1 6  
DU1 C15 C4  C 0 1 Y N N N N N 55.913 60.965 141.423 4.431  1.626  0.072  C15 DU1 7  
DU1 C16 C5  C 0 1 N N N N N N 56.975 61.968 141.700 4.697  3.105  0.187  C16 DU1 8  
DU1 C21 C6  C 0 1 N N N N N N 56.407 63.348 142.052 5.772  3.510  -0.824 C21 DU1 9  
DU1 C20 C7  C 0 1 N N N N N N 57.504 64.339 142.441 6.041  5.012  -0.708 C20 DU1 10 
DU1 C19 C8  C 0 1 N N N N N N 58.870 63.905 141.928 6.524  5.335  0.708  C19 DU1 11 
DU1 C18 C9  C 0 1 N N N N N N 58.773 63.336 140.523 5.449  4.931  1.718  C18 DU1 12 
DU1 C17 C10 C 0 1 N N N N N N 57.900 62.084 140.481 5.179  3.429  1.602  C17 DU1 13 
DU1 N3  N3  N 0 1 Y N N N N N 55.853 59.783 141.999 3.479  1.085  -0.644 N3  DU1 14 
DU1 C23 C11 C 0 1 N N N N N N 52.963 59.628 139.845 4.852  -1.898 0.632  C23 DU1 15 
DU1 O3  O2  O 0 1 N N N N N N 52.372 60.318 139.021 5.768  -2.188 1.380  O3  DU1 16 
DU1 N   N4  N 0 1 N N N N N N 52.504 58.333 140.185 4.080  -2.864 0.092  N   DU1 17 
DU1 C2  C12 C 0 1 N N N N N N 51.308 57.838 139.478 4.358  -4.268 0.403  C2  DU1 18 
DU1 C1  C13 C 0 1 N N N N N N 50.012 58.316 140.056 3.567  -4.681 1.646  C1  DU1 19 
DU1 C   C14 C 0 1 N N N N N N 48.853 57.700 139.296 3.857  -6.148 1.971  C   DU1 20 
DU1 C4  C15 C 0 1 N N N N N N 54.915 57.028 142.709 1.653  -0.991 -1.952 C4  DU1 21 
DU1 C5  C16 C 0 1 N N N N N N 54.250 57.011 144.069 0.371  -0.817 -1.135 C5  DU1 22 
DU1 C6  C17 C 0 1 N N N N N N 54.855 55.989 145.010 -0.796 -0.512 -2.076 C6  DU1 23 
DU1 N2  N5  N 0 1 N N N N N N 56.016 56.509 145.722 -2.024 -0.346 -1.293 N2  DU1 24 
DU1 C7  C18 C 0 1 N N N N N N 56.362 56.068 146.937 -3.187 -0.070 -1.916 C7  DU1 25 
DU1 O2  O3  O 0 1 N N N N N N 55.711 55.205 147.524 -3.218 0.041  -3.126 O2  DU1 26 
DU1 C8  C19 C 0 1 Y N N N N N 57.565 56.681 147.586 -4.426 0.099  -1.126 C8  DU1 27 
DU1 C13 C20 C 0 1 Y N N N N N 57.979 57.988 147.327 -4.392 -0.022 0.264  C13 DU1 28 
DU1 C12 C21 C 0 1 Y N N N N N 59.084 58.525 147.962 -5.552 0.137  0.995  C12 DU1 29 
DU1 C11 C22 C 0 1 Y N N N N N 59.782 57.759 148.882 -6.746 0.414  0.353  C11 DU1 30 
DU1 S   S1  S 0 1 N N N N N N 61.196 58.423 149.712 -8.222 0.615  1.294  S   DU1 31 
DU1 O1  O4  O 0 1 N N N N N N 61.661 59.545 148.925 -8.216 -0.414 2.273  O1  DU1 32 
DU1 O   O5  O 0 1 N N N N N N 62.124 57.328 149.901 -8.306 1.996  1.617  O   DU1 33 
DU1 C10 C23 C 0 1 Y N N N N N 59.384 56.463 149.167 -6.785 0.535  -1.025 C10 DU1 34 
DU1 C9  C24 C 0 1 Y N N N N N 58.278 55.934 148.525 -5.632 0.384  -1.767 C9  DU1 35 
DU1 H1  H1  H 0 1 N N N N N N 54.743 61.959 139.980 5.897  0.791  1.283  H1  DU1 36 
DU1 H2  H2  H 0 1 N N N N N N 57.576 61.618 142.552 3.779  3.656  -0.019 H2  DU1 37 
DU1 H3  H3  H 0 1 N N N N N N 55.866 63.742 141.179 6.690  2.959  -0.618 H3  DU1 38 
DU1 H4  H4  H 0 1 N N N N N N 55.711 63.240 142.897 5.428  3.279  -1.832 H4  DU1 39 
DU1 H5  H5  H 0 1 N N N N N N 57.543 64.413 143.538 6.807  5.300  -1.428 H5  DU1 40 
DU1 H6  H6  H 0 1 N N N N N N 57.261 65.324 142.015 5.123  5.562  -0.914 H6  DU1 41 
DU1 H7  H7  H 0 1 N N N N N N 59.278 63.135 142.600 7.442  4.785  0.914  H7  DU1 42 
DU1 H8  H8  H 0 1 N N N N N N 59.542 64.775 141.917 6.715  6.405  0.790  H8  DU1 43 
DU1 H9  H9  H 0 1 N N N N N N 59.783 63.078 140.172 5.792  5.161  2.726  H9  DU1 44 
DU1 H10 H10 H 0 1 N N N N N N 58.337 64.097 139.859 4.531  5.481  1.512  H10 DU1 45 
DU1 H11 H11 H 0 1 N N N N N N 57.282 62.116 139.572 4.413  3.140  2.322  H11 DU1 46 
DU1 H12 H12 H 0 1 N N N N N N 58.554 61.200 140.449 6.097  2.878  1.808  H12 DU1 47 
DU1 H14 H14 H 0 1 N N N N N N 51.317 56.739 139.513 4.063  -4.893 -0.440 H14 DU1 48 
DU1 H15 H15 H 0 1 N N N N N N 51.363 58.172 138.431 5.424  -4.394 0.593  H15 DU1 49 
DU1 H16 H16 H 0 1 N N N N N N 49.959 59.412 139.977 3.862  -4.057 2.489  H16 DU1 50 
DU1 H17 H17 H 0 1 N N N N N N 49.953 58.021 141.114 2.501  -4.556 1.456  H17 DU1 51 
DU1 H18 H18 H 0 1 N N N N N N 47.904 58.054 139.724 3.294  -6.442 2.856  H18 DU1 52 
DU1 H19 H19 H 0 1 N N N N N N 48.910 57.995 138.238 3.562  -6.772 1.128  H19 DU1 53 
DU1 H20 H20 H 0 1 N N N N N N 48.904 56.604 139.374 4.923  -6.274 2.160  H20 DU1 54 
DU1 H21 H21 H 0 1 N N N N N N 54.898 56.007 142.299 1.860  -0.074 -2.503 H21 DU1 55 
DU1 H22 H22 H 0 1 N N N N N N 55.958 57.356 142.834 1.527  -1.816 -2.653 H22 DU1 56 
DU1 H23 H23 H 0 1 N N N N N N 54.352 58.008 144.522 0.164  -1.734 -0.583 H23 DU1 57 
DU1 H24 H24 H 0 1 N N N N N N 53.184 56.776 143.935 0.497  0.008  -0.433 H24 DU1 58 
DU1 H25 H25 H 0 1 N N N N N N 54.093 55.692 145.746 -0.589 0.405  -2.627 H25 DU1 59 
DU1 H26 H26 H 0 1 N N N N N N 55.163 55.110 144.426 -0.922 -1.337 -2.777 H26 DU1 60 
DU1 H27 H27 H 0 1 N N N N N N 56.572 57.218 145.288 -1.999 -0.434 -0.328 H27 DU1 61 
DU1 H28 H28 H 0 1 N N N N N N 57.428 58.590 146.620 -3.461 -0.239 0.767  H28 DU1 62 
DU1 H29 H29 H 0 1 N N N N N N 59.401 59.534 147.743 -5.528 0.044  2.071  H29 DU1 63 
DU1 H32 H32 H 0 1 N N N N N N 59.932 55.870 149.884 -7.720 0.752  -1.520 H32 DU1 64 
DU1 H33 H33 H 0 1 N N N N N N 57.962 54.927 148.754 -5.663 0.483  -2.842 H33 DU1 65 
DU1 F1  F1  F 0 1 N Y N N N N 60.663 58.933 151.144 -9.459 0.302  0.312  F1  DU1 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DU1 O3  C23 DOUB N N 1  
DU1 C   C1  SING N N 2  
DU1 C2  C1  SING N N 3  
DU1 C2  N   SING N N 4  
DU1 C23 N   SING N N 5  
DU1 C23 C22 SING N N 6  
DU1 N   C3  SING N N 7  
DU1 C17 C18 SING N N 8  
DU1 C17 C16 SING N N 9  
DU1 C18 C19 SING N N 10 
DU1 N4  C22 SING Y N 11 
DU1 N4  C15 SING Y N 12 
DU1 C22 C14 DOUB Y N 13 
DU1 C3  O4  DOUB N N 14 
DU1 C3  N1  SING N N 15 
DU1 C15 C16 SING N N 16 
DU1 C15 N3  DOUB Y N 17 
DU1 C14 N1  SING N N 18 
DU1 C14 N3  SING Y N 19 
DU1 C16 C21 SING N N 20 
DU1 N1  C4  SING N N 21 
DU1 C19 C20 SING N N 22 
DU1 C21 C20 SING N N 23 
DU1 C4  C5  SING N N 24 
DU1 C5  C6  SING N N 25 
DU1 C6  N2  SING N N 26 
DU1 N2  C7  SING N N 27 
DU1 C7  O2  DOUB N N 28 
DU1 C7  C8  SING N N 29 
DU1 C13 C8  DOUB Y N 30 
DU1 C13 C12 SING Y N 31 
DU1 C8  C9  SING Y N 32 
DU1 C12 C11 DOUB Y N 33 
DU1 C9  C10 DOUB Y N 34 
DU1 C11 C10 SING Y N 35 
DU1 C11 S   SING N N 36 
DU1 O1  S   DOUB N N 37 
DU1 S   O   DOUB N N 38 
DU1 N4  H1  SING N N 39 
DU1 C16 H2  SING N N 40 
DU1 C21 H3  SING N N 41 
DU1 C21 H4  SING N N 42 
DU1 C20 H5  SING N N 43 
DU1 C20 H6  SING N N 44 
DU1 C19 H7  SING N N 45 
DU1 C19 H8  SING N N 46 
DU1 C18 H9  SING N N 47 
DU1 C18 H10 SING N N 48 
DU1 C17 H11 SING N N 49 
DU1 C17 H12 SING N N 50 
DU1 C2  H14 SING N N 51 
DU1 C2  H15 SING N N 52 
DU1 C1  H16 SING N N 53 
DU1 C1  H17 SING N N 54 
DU1 C   H18 SING N N 55 
DU1 C   H19 SING N N 56 
DU1 C   H20 SING N N 57 
DU1 C4  H21 SING N N 58 
DU1 C4  H22 SING N N 59 
DU1 C5  H23 SING N N 60 
DU1 C5  H24 SING N N 61 
DU1 C6  H25 SING N N 62 
DU1 C6  H26 SING N N 63 
DU1 N2  H27 SING N N 64 
DU1 C13 H28 SING N N 65 
DU1 C12 H29 SING N N 66 
DU1 C10 H32 SING N N 67 
DU1 C9  H33 SING N N 68 
DU1 S   F1  SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DU1 SMILES           ACDLabs              12.01 "O=C3N(CCCNC(=O)c1ccc(cc1)S(=O)(F)=O)c2nc(nc2C(N3CCC)=O)C4CCCCC4"                                                                                                                    
DU1 InChI            InChI                1.03  "InChI=1S/C24H30FN5O5S/c1-2-14-30-23(32)19-21(28-20(27-19)16-7-4-3-5-8-16)29(24(30)33)15-6-13-26-22(31)17-9-11-18(12-10-17)36(25,34)35/h9-12,16H,2-8,13-15H2,1H3,(H,26,31)(H,27,28)" 
DU1 InChIKey         InChI                1.03  KAJVJPLKXGLLDA-UHFFFAOYSA-N                                                                                                                                                          
DU1 SMILES_CANONICAL CACTVS               3.385 "CCCN1C(=O)N(CCCNC(=O)c2ccc(cc2)[S](F)(=O)=O)c3nc([nH]c3C1=O)C4CCCCC4"                                                                                                               
DU1 SMILES           CACTVS               3.385 "CCCN1C(=O)N(CCCNC(=O)c2ccc(cc2)[S](F)(=O)=O)c3nc([nH]c3C1=O)C4CCCCC4"                                                                                                               
DU1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCN1C(=O)c2c(nc([nH]2)C3CCCCC3)N(C1=O)CCCNC(=O)c4ccc(cc4)S(=O)(=O)F"                                                                                                               
DU1 SMILES           "OpenEye OEToolkits" 2.0.6 "CCCN1C(=O)c2c(nc([nH]2)C3CCCCC3)N(C1=O)CCCNC(=O)c4ccc(cc4)S(=O)(=O)F"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DU1 "SYSTEMATIC NAME" ACDLabs              12.01 "4-{[3-(8-cyclohexyl-2,6-dioxo-1-propyl-1,2,6,7-tetrahydro-3H-purin-3-yl)propyl]carbamoyl}benzene-1-sulfonyl fluoride" 
DU1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[3-[8-cyclohexyl-2,6-bis(oxidanylidene)-1-propyl-7~{H}-purin-3-yl]propylcarbamoyl]benzenesulfonyl fluoride"         
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DU1 "Create component" 2017-01-12 RCSB 
DU1 "Initial release"  2017-03-01 RCSB 
DU1 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            DU1 
_pdbx_chem_comp_pcm.modified_residue_id                TYR 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OH 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
