data_AR1
#

_chem_comp.id                                   AR1
_chem_comp.name                                 
;(2-{[4-({4-[(4-FORMYLAMINO-1-METHYL-1H-IMIDAZOLE-2-CARBONYL)-AMINO]-1-METHYL-1H-IMIDAZOLE-2-CARBONYL}-AMINO)-1-METHYL-1
H-IMIDAZOLE-2-CARBONYL]-AMINO}-ETHYL)-DIMETHYL-AMMONIUM
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H28 N11 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "TRI-IMIDAZOLE DNA MINOR GROOVE BINDER; AR-1-144"
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    1999-07-16
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       486.508
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AR1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1CYZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AR1  CA    CA    C  0  1  N  N  N   9.700    3.529   9.439    8.427  -4.340   0.040  CA    AR1   1  
AR1  OA    OA    O  0  1  N  N  N  10.202    3.923   8.388    9.394  -3.608   0.012  OA    AR1   2  
AR1  N1    N1    N  0  1  N  N  N  10.277    2.692  10.306    7.185  -3.817   0.043  N1    AR1   3  
AR1  C11   C11   C  0  1  Y  N  N  11.598    2.149  10.179    7.010  -2.425   0.014  C11   AR1   4  
AR1  N21   N21   N  0  1  Y  N  N  12.198    1.413  11.128    5.841  -1.784   0.014  N21   AR1   5  
AR1  C31   C31   C  0  1  Y  N  N  13.471    1.164  10.763    6.059  -0.485  -0.012  C31   AR1   6  
AR1  N41   N41   N  0  1  Y  N  N  13.669    1.761   9.549    7.408  -0.273  -0.038  N41   AR1   7  
AR1  CN1   CN1   C  0  1  N  N  N  14.923    1.786   8.777    8.085   1.026  -0.074  CN1   AR1   8  
AR1  C51   C51   C  0  1  Y  N  N  12.489    2.354   9.188    8.006  -1.496  -0.018  C51   AR1   9  
AR1  C1    C1    C  0  1  N  N  N  14.460    0.428  11.575    5.022   0.562  -0.021  C1    AR1  10  
AR1  O1    O1    O  0  1  N  N  N  15.634    0.365  11.223    5.343   1.735  -0.045  O1    AR1  11  
AR1  N2    N2    N  0  1  N  N  N  13.942   -0.284  12.595    3.719   0.220  -0.002  N2    AR1  12  
AR1  C12   C12   C  0  1  Y  N  N  14.649   -1.198  13.439    2.732   1.216  -0.011  C12   AR1  13  
AR1  N22   N22   N  0  1  Y  N  N  14.061   -2.003  14.349    1.415   1.011  -0.001  N22   AR1  14  
AR1  C32   C32   C  0  1  Y  N  N  14.996   -2.661  15.046    0.795   2.174  -0.010  C32   AR1  15  
AR1  N42   N42   N  0  1  Y  N  N  16.208   -2.260  14.541    1.735   3.165  -0.036  N42   AR1  16  
AR1  CN2   CN2   C  0  1  N  N  N  17.527   -2.737  14.962    1.479   4.607  -0.060  CN2   AR1  17  
AR1  C52   C52   C  0  1  Y  N  N  15.976   -1.355  13.545    2.955   2.560  -0.037  C52   AR1  18  
AR1  C2    C2    C  0  1  N  N  N  14.739   -3.460  16.258   -0.664   2.372   0.001  C2    AR1  19  
AR1  O2    O2    O  0  1  N  N  N  15.681   -3.760  16.983   -1.126   3.498  -0.015  O2    AR1  20  
AR1  N3    N3    N  0  1  N  N  N  13.490   -3.935  16.444   -1.489   1.306   0.027  N3    AR1  21  
AR1  C13   C13   C  0  1  Y  N  N  13.100   -4.807  17.523   -2.878   1.495   0.037  C13   AR1  22  
AR1  N23   N23   N  0  1  Y  N  N  11.905   -5.435  17.637   -3.798   0.529   0.058  N23   AR1  23  
AR1  C33   C33   C  0  1  Y  N  N  11.843   -6.074  18.812   -4.998   1.073   0.064  C33   AR1  24  
AR1  N43   N43   N  0  1  Y  N  N  13.016   -5.831  19.469   -4.857   2.432   0.039  N43   AR1  25  
AR1  CN3   CN3   C  0  1  N  N  N  13.374   -6.266  20.828   -5.939   3.419   0.031  CN3   AR1  26  
AR1  C53   C53   C  0  1  Y  N  N  13.786   -5.063  18.654   -3.521   2.696   0.023  C53   AR1  27  
AR1  C3    C3    C  0  1  N  N  N  10.778   -6.968  19.271   -6.275   0.341   0.089  C3    AR1  28  
AR1  O3    O3    O  0  1  N  N  N  10.919   -7.534  20.351   -7.327   0.952   0.088  O3    AR1  29  
AR1  NT    NT    N  0  1  N  N  N   9.760   -7.236  18.433   -6.279  -1.007   0.112  NT    AR1  30  
AR1  C1T   C1T   C  0  1  N  N  N   8.752   -8.236  18.772   -7.550  -1.736   0.137  C1T   AR1  31  
AR1  C2T   C2T   C  0  1  N  N  N   7.675   -7.648  19.742   -7.274  -3.241   0.160  C2T   AR1  32  
AR1  N3T   N3T   N  1  1  N  N  N   8.026   -8.006  21.150   -8.548  -3.971   0.185  N3T   AR1  33  
AR1  CNT   CNT   C  0  1  N  N  N   7.636   -7.023  22.175   -9.276  -3.729  -1.068  CNT   AR1  34  
AR1  CMT   CMT   C  0  1  N  N  N   7.653   -9.376  21.552   -8.285  -5.409   0.328  CMT   AR1  35  
AR1  HA    HA    H  0  1  N  N  N   8.732    3.908   9.756    8.562  -5.412   0.062  HA    AR1  36  
AR1  HN1   HN1   H  0  1  N  N  N   9.757    2.488  11.140    6.412  -4.402   0.065  HN1   AR1  37  
AR1  HN11  1HN1  H  0  0  N  N  N  15.662    2.388   9.308    8.240   1.326  -1.110  HN11  AR1  38  
AR1  HN12  2HN1  H  0  0  N  N  N  14.746    2.222   7.793    7.469   1.770   0.431  HN12  AR1  39  
AR1  HN13  3HN1  H  0  0  N  N  N  15.303    0.771   8.659    9.048   0.948   0.430  HN13  AR1  40  
AR1  H51   H51   H  0  1  N  N  N  12.277    2.802   8.229    9.068  -1.693  -0.026  H51   AR1  41  
AR1  HN2   HN2   H  0  1  N  N  N  12.953   -0.255  12.728    3.463  -0.716   0.017  HN2   AR1  42  
AR1  HN21  1HN2  H  0  0  N  N  N  17.540   -3.826  14.920    1.407   4.946  -1.093  HN21  AR1  43  
AR1  HN22  2HN2  H  0  0  N  N  N  17.722   -2.403  15.980    0.544   4.819   0.459  HN22  AR1  44  
AR1  HN23  3HN2  H  0  0  N  N  N  18.289   -2.339  14.291    2.297   5.129   0.437  HN23  AR1  45  
AR1  H52   H52   H  0  1  N  N  N  16.724   -0.884  12.925    3.916   3.051  -0.054  H52   AR1  46  
AR1  HN3   HN3   H  0  1  N  N  N  12.790   -3.756  15.748   -1.121   0.409   0.040  HN3   AR1  47  
AR1  HN31  1HN3  H  0  0  N  N  N  12.624   -5.893  21.530   -6.216   3.646  -0.998  HN31  AR1  48  
AR1  HN32  2HN3  H  0  0  N  N  N  14.350   -5.866  21.098   -6.803   3.016   0.560  HN32  AR1  49  
AR1  HN33  3HN3  H  0  0  N  N  N  13.399   -7.354  20.870   -5.603   4.330   0.527  HN33  AR1  50  
AR1  H53   H53   H  0  1  N  N  N  14.793   -4.758  18.872   -3.059   3.672   0.002  H53   AR1  51  
AR1  HT    HT    H  0  1  N  N  N   9.723   -6.820  17.513   -5.440  -1.494   0.113  HT    AR1  52  
AR1  H1T1  1H1T  H  0  0  N  N  N   9.283   -9.027  19.322   -8.112  -1.455   1.027  H1T1  AR1  53  
AR1  H1T2  2H1T  H  0  0  N  N  N   8.363   -8.627  17.802   -8.129  -1.486  -0.752  H1T2  AR1  54  
AR1  H2T1  1H2T  H  0  0  N  N  N   6.659   -8.034  19.466   -6.712  -3.521  -0.731  H2T1  AR1  55  
AR1  H2T2  2H2T  H  0  0  N  N  N   7.730   -6.542  19.604   -6.695  -3.490   1.049  H2T2  AR1  56  
AR1  HNT   HNT   H  0  1  N  N  N   9.025   -7.988  21.183   -9.104  -3.652   0.964  HNT   AR1  57  
AR1  HNT1  1HNT  H  0  0  N  N  N   7.961   -6.018  21.897  -10.222  -4.271  -1.050  HNT1  AR1  58  
AR1  HNT2  2HNT  H  0  0  N  N  N   8.126   -7.277  23.123   -9.471  -2.662  -1.174  HNT2  AR1  59  
AR1  HNT3  3HNT  H  0  0  N  N  N   6.559   -7.019  22.340   -8.676  -4.074  -1.910  HNT3  AR1  60  
AR1  HMT1  1HMT  H  0  0  N  N  N   6.613   -9.595  21.309   -7.745  -5.589   1.257  HMT1  AR1  61  
AR1  HMT2  2HMT  H  0  0  N  N  N   7.792   -9.509  22.631   -9.231  -5.952   0.346  HMT2  AR1  62  
AR1  HMT3  3HMT  H  0  0  N  N  N   8.292  -10.107  21.048   -7.685  -5.754  -0.514  HMT3  AR1  63  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AR1  CA   OA    DOUB  N  N   1  
AR1  CA   N1    SING  N  N   2  
AR1  CA   HA    SING  N  N   3  
AR1  N1   C11   SING  N  N   4  
AR1  N1   HN1   SING  N  N   5  
AR1  C11  N21   SING  Y  N   6  
AR1  C11  C51   DOUB  Y  N   7  
AR1  N21  C31   DOUB  Y  N   8  
AR1  C31  N41   SING  Y  N   9  
AR1  C31  C1    SING  N  N  10  
AR1  N41  CN1   SING  N  N  11  
AR1  N41  C51   SING  Y  N  12  
AR1  CN1  HN11  SING  N  N  13  
AR1  CN1  HN12  SING  N  N  14  
AR1  CN1  HN13  SING  N  N  15  
AR1  C51  H51   SING  N  N  16  
AR1  C1   O1    DOUB  N  N  17  
AR1  C1   N2    SING  N  N  18  
AR1  N2   C12   SING  N  N  19  
AR1  N2   HN2   SING  N  N  20  
AR1  C12  N22   SING  Y  N  21  
AR1  C12  C52   DOUB  Y  N  22  
AR1  N22  C32   DOUB  Y  N  23  
AR1  C32  N42   SING  Y  N  24  
AR1  C32  C2    SING  N  N  25  
AR1  N42  CN2   SING  N  N  26  
AR1  N42  C52   SING  Y  N  27  
AR1  CN2  HN21  SING  N  N  28  
AR1  CN2  HN22  SING  N  N  29  
AR1  CN2  HN23  SING  N  N  30  
AR1  C52  H52   SING  N  N  31  
AR1  C2   O2    DOUB  N  N  32  
AR1  C2   N3    SING  N  N  33  
AR1  N3   C13   SING  N  N  34  
AR1  N3   HN3   SING  N  N  35  
AR1  C13  N23   SING  Y  N  36  
AR1  C13  C53   DOUB  Y  N  37  
AR1  N23  C33   DOUB  Y  N  38  
AR1  C33  N43   SING  Y  N  39  
AR1  C33  C3    SING  N  N  40  
AR1  N43  CN3   SING  N  N  41  
AR1  N43  C53   SING  Y  N  42  
AR1  CN3  HN31  SING  N  N  43  
AR1  CN3  HN32  SING  N  N  44  
AR1  CN3  HN33  SING  N  N  45  
AR1  C53  H53   SING  N  N  46  
AR1  C3   O3    DOUB  N  N  47  
AR1  C3   NT    SING  N  N  48  
AR1  NT   C1T   SING  N  N  49  
AR1  NT   HT    SING  N  N  50  
AR1  C1T  C2T   SING  N  N  51  
AR1  C1T  H1T1  SING  N  N  52  
AR1  C1T  H1T2  SING  N  N  53  
AR1  C2T  N3T   SING  N  N  54  
AR1  C2T  H2T1  SING  N  N  55  
AR1  C2T  H2T2  SING  N  N  56  
AR1  N3T  CNT   SING  N  N  57  
AR1  N3T  CMT   SING  N  N  58  
AR1  N3T  HNT   SING  N  N  59  
AR1  CNT  HNT1  SING  N  N  60  
AR1  CNT  HNT2  SING  N  N  61  
AR1  CNT  HNT3  SING  N  N  62  
AR1  CMT  HMT1  SING  N  N  63  
AR1  CMT  HMT2  SING  N  N  64  
AR1  CMT  HMT3  SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AR1  SMILES            ACDLabs               10.04  "O=C(c1nc(NC=O)cn1C)Nc3nc(C(=O)Nc2nc(C(=O)NCC[NH+](C)C)n(c2)C)n(c3)C"  
AR1  SMILES_CANONICAL  CACTVS                3.341  "Cn1cc(NC=O)nc1C(=O)Nc2cn(C)c(n2)C(=O)Nc3cn(C)c(n3)C(=O)NCC[NH+](C)C"  
AR1  SMILES            CACTVS                3.341  "Cn1cc(NC=O)nc1C(=O)Nc2cn(C)c(n2)C(=O)Nc3cn(C)c(n3)C(=O)NCC[NH+](C)C"  
AR1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cn1cc(nc1C(=O)Nc2cn(c(n2)C(=O)Nc3cn(c(n3)C(=O)NCC[NH+](C)C)C)C)NC=O"  
AR1  SMILES            "OpenEye OEToolkits"  1.5.0  "Cn1cc(nc1C(=O)Nc2cn(c(n2)C(=O)Nc3cn(c(n3)C(=O)NCC[NH+](C)C)C)C)NC=O"  
AR1  InChI             InChI                 1.03   "InChI=1S/C20H27N11O4/c1-28(2)7-6-21-18(33)15-24-13(9-30(15)4)26-20(35)17-25-14(10-31(17)5)27-19(34)16-23-12(22-11-32)8-29(16)3/h8-11H,6-7H2,1-5H3,(H,21,33)(H,22,32)(H,26,35)(H,27,34)/p+1"  
AR1  InChIKey          InChI                 1.03   PFRKDKQPQSBYQX-UHFFFAOYSA-O  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AR1  "SYSTEMATIC NAME"  ACDLabs               10.04  "2-({[4-({[4-({[4-(formylamino)-1-methyl-1H-imidazol-2-yl]carbonyl}amino)-1-methyl-1H-imidazol-2-yl]carbonyl}amino)-1-methyl-1H-imidazol-2-yl]carbonyl}amino)-N,N-dimethylethanaminium"  
AR1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[[4-[[4-[(4-formamido-1-methyl-imidazol-2-yl)carbonylamino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-imidazol-2-yl]carbonylamino]ethyl-dimethyl-azanium"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AR1  "Create component"   1999-07-16  RCSB  
AR1  "Modify descriptor"  2011-06-04  RCSB  
AR1  "Modify synonyms"    2020-06-05  PDBE  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  AR1  "TRI-IMIDAZOLE DNA MINOR GROOVE BINDER"  ?  ?  
2  AR1  AR-1-144                                 ?  ?  
##
