data_A1IB1
# 
_chem_comp.id                                    A1IB1 
_chem_comp.name                                  "4-(phenylmethyl)piperidine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H17 N" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-05-20 
_chem_comp.pdbx_modified_date                    2024-06-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        175.270 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IB1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9FDI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IB1 C1  C1  C 0 1 N N N N N N -18.006 0.761  22.764 0.065  -1.055 0.904  C1  A1IB1 1  
A1IB1 C2  C2  C 0 1 N N N N N N -16.960 1.003  23.851 -1.071 -0.547 0.014  C2  A1IB1 2  
A1IB1 C3  C3  C 0 1 N N N N N N -16.121 2.261  23.589 -1.207 0.970  0.173  C3  A1IB1 3  
A1IB1 C6  C4  C 0 1 N N N N N N -14.966 0.016  25.038 -3.527 -0.659 -0.423 C6  A1IB1 4  
A1IB1 C7  C5  C 0 1 N N N N N N -16.043 -0.213 23.992 -2.384 -1.216 0.429  C7  A1IB1 5  
A1IB1 C8  C6  C 0 1 Y N N N N N -18.980 1.898  22.572 1.375  -0.492 0.416  C8  A1IB1 6  
A1IB1 C10 C7  C 0 1 Y N N N N N -21.107 2.917  23.017 3.038  1.230  0.465  C10 A1IB1 7  
A1IB1 C11 C8  C 0 1 Y N N N N N -20.765 3.990  22.214 3.779  0.541  -0.477 C11 A1IB1 8  
A1IB1 C12 C9  C 0 1 Y N N N N N -19.537 4.020  21.592 3.315  -0.661 -0.977 C12 A1IB1 9  
A1IB1 C13 C10 C 0 1 Y N N N N N -18.653 2.980  21.771 2.113  -1.178 -0.530 C13 A1IB1 10 
A1IB1 C4  C11 C 0 1 N N N N N N -15.029 2.439  24.636 -2.383 1.463  -0.672 C4  A1IB1 11 
A1IB1 N5  N1  N 0 1 N N N N N N -14.172 1.226  24.701 -3.615 0.795  -0.235 N5  A1IB1 12 
A1IB1 C9  C12 C 0 1 Y N N N N N -20.219 1.880  23.192 1.836  0.713  0.912  C9  A1IB1 13 
A1IB1 H17 H1  H 0 1 N N N N N N -18.577 -0.140 23.031 -0.108 -0.736 1.931  H17 A1IB1 14 
A1IB1 H16 H2  H 0 1 N N N N N N -17.481 0.594  21.812 0.100  -2.144 0.862  H16 A1IB1 15 
A1IB1 H18 H3  H 0 1 N N N N N N -17.488 1.142  24.806 -0.854 -0.787 -1.027 H18 A1IB1 16 
A1IB1 H20 H4  H 0 1 N N N N N N -15.653 2.177  22.597 -1.385 1.211  1.221  H20 A1IB1 17 
A1IB1 H19 H5  H 0 1 N N N N N N -16.781 3.140  23.610 -0.289 1.454  -0.161 H19 A1IB1 18 
A1IB1 H24 H6  H 0 1 N N N N N N -15.438 0.154  26.022 -3.336 -0.878 -1.474 H24 A1IB1 19 
A1IB1 H23 H7  H 0 1 N N N N N N -14.299 -0.858 25.071 -4.465 -1.122 -0.120 H23 A1IB1 20 
A1IB1 H25 H8  H 0 1 N N N N N N -16.647 -1.083 24.287 -2.309 -2.292 0.277  H25 A1IB1 21 
A1IB1 H26 H9  H 0 1 N N N N N N -15.562 -0.412 23.023 -2.581 -1.009 1.481  H26 A1IB1 22 
A1IB1 H28 H10 H 0 1 N N N N N N -22.070 2.893  23.506 3.398  2.172  0.852  H28 A1IB1 23 
A1IB1 H29 H11 H 0 1 N N N N N N -21.461 4.804  22.075 4.718  0.945  -0.826 H29 A1IB1 24 
A1IB1 H30 H12 H 0 1 N N N N N N -19.268 4.857  20.965 3.891  -1.197 -1.717 H30 A1IB1 25 
A1IB1 H31 H13 H 0 1 N N N N N N -17.691 3.008  21.280 1.751  -2.117 -0.921 H31 A1IB1 26 
A1IB1 H21 H14 H 0 1 N N N N N N -14.409 3.307  24.369 -2.491 2.541  -0.549 H21 A1IB1 27 
A1IB1 H22 H15 H 0 1 N N N N N N -15.493 2.608  25.619 -2.198 1.234  -1.721 H22 A1IB1 28 
A1IB1 H14 H16 H 0 1 N N N N N N -13.733 1.090  23.813 -3.830 1.023  0.724  H14 A1IB1 29 
A1IB1 H27 H18 H 0 1 N N N N N N -20.491 1.044  23.819 1.258  1.251  1.648  H27 A1IB1 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IB1 C12 C13 DOUB Y N 1  
A1IB1 C12 C11 SING Y N 2  
A1IB1 C13 C8  SING Y N 3  
A1IB1 C11 C10 DOUB Y N 4  
A1IB1 C8  C1  SING N N 5  
A1IB1 C8  C9  DOUB Y N 6  
A1IB1 C1  C2  SING N N 7  
A1IB1 C10 C9  SING Y N 8  
A1IB1 C3  C2  SING N N 9  
A1IB1 C3  C4  SING N N 10 
A1IB1 C2  C7  SING N N 11 
A1IB1 C7  C6  SING N N 12 
A1IB1 C4  N5  SING N N 13 
A1IB1 N5  C6  SING N N 14 
A1IB1 C1  H17 SING N N 15 
A1IB1 C1  H16 SING N N 16 
A1IB1 C2  H18 SING N N 17 
A1IB1 C3  H20 SING N N 18 
A1IB1 C3  H19 SING N N 19 
A1IB1 C6  H24 SING N N 20 
A1IB1 C6  H23 SING N N 21 
A1IB1 C7  H25 SING N N 22 
A1IB1 C7  H26 SING N N 23 
A1IB1 C10 H28 SING N N 24 
A1IB1 C11 H29 SING N N 25 
A1IB1 C12 H30 SING N N 26 
A1IB1 C13 H31 SING N N 27 
A1IB1 C4  H21 SING N N 28 
A1IB1 C4  H22 SING N N 29 
A1IB1 N5  H14 SING N N 30 
A1IB1 C9  H27 SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IB1 InChI            InChI                1.06  "InChI=1S/C12H17N/c1-2-4-11(5-3-1)10-12-6-8-13-9-7-12/h1-5,12-13H,6-10H2" 
A1IB1 InChIKey         InChI                1.06  ABGXADJDTPFFSZ-UHFFFAOYSA-N                                               
A1IB1 SMILES_CANONICAL CACTVS               3.385 "C1CC(CCN1)Cc2ccccc2"                                                     
A1IB1 SMILES           CACTVS               3.385 "C1CC(CCN1)Cc2ccccc2"                                                     
A1IB1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2CCNCC2"                                                     
A1IB1 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2CCNCC2"                                                     
# 
_pdbx_chem_comp_identifier.comp_id           A1IB1 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-(phenylmethyl)piperidine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IB1 "Create component" 2024-05-20 PDBE 
A1IB1 "Initial release"  2024-07-03 RCSB 
# 
