data_A1AP1
# 
_chem_comp.id                                    A1AP1 
_chem_comp.name                                  O-phosphono-D-tyrosine 
_chem_comp.type                                  "D-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H12 N O6 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-26 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        261.168 
_chem_comp.one_letter_code                       W 
_chem_comp.three_letter_code                     A1AP1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9BJN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AP1 N   N1  N 0 1 N N N Y Y N -20.148 8.645  8.805  -3.419 1.470  0.756  N   A1AP1 1  
A1AP1 CA  C1  C 0 1 N N R N Y N -20.292 10.072 9.034  -3.558 0.055  0.388  CA  A1AP1 2  
A1AP1 C   C2  C 0 1 N N N N Y Y -21.633 10.544 8.486  -4.975 -0.214 -0.048 C   A1AP1 3  
A1AP1 O   O1  O 0 1 N N N N Y Y -21.677 11.196 7.412  -5.682 0.700  -0.399 O   A1AP1 4  
A1AP1 CB  C3  C 0 1 N N N N N N -20.159 10.361 10.525 -2.600 -0.270 -0.760 CB  A1AP1 5  
A1AP1 CG  C4  C 0 1 Y N N N N N -19.582 11.742 10.831 -1.178 -0.119 -0.286 CG  A1AP1 6  
A1AP1 CD1 C5  C 0 1 Y N N N N N -20.193 12.560 11.761 -0.515 -1.200 0.265  CD1 A1AP1 7  
A1AP1 CE1 C6  C 0 1 Y N N N N N -19.670 13.811 12.040 0.789  -1.064 0.700  CE1 A1AP1 8  
A1AP1 CZ  C7  C 0 1 Y N N N N N -18.535 14.247 11.384 1.434  0.159  0.583  CZ  A1AP1 9  
A1AP1 CE2 C8  C 0 1 Y N N N N N -17.925 13.426 10.456 0.767  1.242  0.030  CE2 A1AP1 10 
A1AP1 CD2 C9  C 0 1 Y N N N N N -18.447 12.177 10.179 -0.535 1.100  -0.409 CD2 A1AP1 11 
A1AP1 OH  O2  O 0 1 N N N N N N -17.986 15.504 11.657 2.716  0.296  1.011  OH  A1AP1 12 
A1AP1 OP3 O3  O 0 1 N N N N N N -18.213 18.046 11.292 3.734  -1.576 -0.530 OP3 A1AP1 13 
A1AP1 OP1 O4  O 0 1 N N N N N N -20.207 16.639 10.978 3.565  0.820  -1.308 OP1 A1AP1 14 
A1AP1 OP2 O5  O 0 1 N N N N N N -19.301 17.027 13.244 5.288  0.298  0.463  OP2 A1AP1 15 
A1AP1 P   P1  P 0 1 N N N N N N -18.952 16.829 11.792 3.820  -0.022 -0.117 P   A1AP1 16 
A1AP1 H1  H1  H 0 1 N N N Y Y N -19.268 8.336  9.165  -3.636 2.070  -0.026 H1  A1AP1 17 
A1AP1 H2  H2  H 0 1 N Y N Y Y N -20.887 8.157  9.269  -3.994 1.694  1.554  H2  A1AP1 18 
A1AP1 HA  H4  H 0 1 N N N N Y N -19.492 10.609 8.504  -3.317 -0.569 1.249  HA  A1AP1 19 
A1AP1 HB2 H6  H 0 1 N N N N N N -21.157 10.292 10.983 -2.766 -1.295 -1.092 HB2 A1AP1 20 
A1AP1 HB3 H7  H 0 1 N N N N N N -19.498 9.602  10.969 -2.782 0.414  -1.589 HB3 A1AP1 21 
A1AP1 HD1 H8  H 0 1 N N N N N N -21.082 12.222 12.273 -1.018 -2.151 0.356  HD1 A1AP1 22 
A1AP1 HE1 H9  H 0 1 N N N N N N -20.149 14.446 12.770 1.306  -1.908 1.131  HE1 A1AP1 23 
A1AP1 HE2 H10 H 0 1 N N N N N N -17.035 13.762 9.944  1.267  2.195  -0.062 HE2 A1AP1 24 
A1AP1 HD2 H11 H 0 1 N N N N N N -17.966 11.541 9.451  -1.055 1.942  -0.840 HD2 A1AP1 25 
A1AP1 H12 H12 H 0 1 N N N N N N -18.694 18.435 10.571 3.891  -2.187 0.203  H12 A1AP1 26 
A1AP1 H13 H13 H 0 1 N N N N N N -20.244 16.992 13.351 6.004  0.129  -0.165 H13 A1AP1 27 
A1AP1 OXT OXT O 0 1 N Y N N Y Y ?       ?      ?      -5.451 -1.469 -0.045 OXT A1AP1 28 
A1AP1 H3  H3  H 0 1 N Y N N Y Y ?       ?      ?      -6.366 -1.592 -0.333 H3  A1AP1 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AP1 O   C   DOUB N N 1  
A1AP1 C   CA  SING N N 2  
A1AP1 N   CA  SING N N 3  
A1AP1 CA  CB  SING N N 4  
A1AP1 CD2 CE2 DOUB Y N 5  
A1AP1 CD2 CG  SING Y N 6  
A1AP1 CE2 CZ  SING Y N 7  
A1AP1 CB  CG  SING N N 8  
A1AP1 CG  CD1 DOUB Y N 9  
A1AP1 OP1 P   DOUB N N 10 
A1AP1 OP3 P   SING N N 11 
A1AP1 CZ  OH  SING N N 12 
A1AP1 CZ  CE1 DOUB Y N 13 
A1AP1 OH  P   SING N N 14 
A1AP1 CD1 CE1 SING Y N 15 
A1AP1 P   OP2 SING N N 16 
A1AP1 N   H1  SING N N 17 
A1AP1 N   H2  SING N N 18 
A1AP1 CA  HA  SING N N 19 
A1AP1 CB  HB2 SING N N 20 
A1AP1 CB  HB3 SING N N 21 
A1AP1 CD1 HD1 SING N N 22 
A1AP1 CE1 HE1 SING N N 23 
A1AP1 CE2 HE2 SING N N 24 
A1AP1 CD2 HD2 SING N N 25 
A1AP1 OP3 H12 SING N N 26 
A1AP1 OP2 H13 SING N N 27 
A1AP1 C   OXT SING N N 28 
A1AP1 OXT H3  SING N N 29 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AP1 SMILES           ACDLabs              12.01 "OP(=O)(O)Oc1ccc(cc1)CC(N)C(=O)O"                                                                                 
A1AP1 InChI            InChI                1.06  "InChI=1S/C9H12NO6P/c10-8(9(11)12)5-6-1-3-7(4-2-6)16-17(13,14)15/h1-4,8H,5,10H2,(H,11,12)(H2,13,14,15)/t8-/m1/s1" 
A1AP1 InChIKey         InChI                1.06  DCWXELXMIBXGTH-MRVPVSSYSA-N                                                                                       
A1AP1 SMILES_CANONICAL CACTVS               3.385 "N[C@H](Cc1ccc(O[P](O)(O)=O)cc1)C(O)=O"                                                                           
A1AP1 SMILES           CACTVS               3.385 "N[CH](Cc1ccc(O[P](O)(O)=O)cc1)C(O)=O"                                                                            
A1AP1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C[C@H](C(=O)O)N)OP(=O)(O)O"                                                                             
A1AP1 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CC(C(=O)O)N)OP(=O)(O)O"                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AP1 "SYSTEMATIC NAME" ACDLabs              12.01 O-phosphono-D-tyrosine                                    
A1AP1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-azanyl-3-(4-phosphonooxyphenyl)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AP1 "Create component"      2024-04-26 RCSB 
A1AP1 "Modify identifier"     2024-04-29 RCSB 
A1AP1 "Modify parent residue" 2024-04-29 RCSB 
A1AP1 "Initial release"       2024-09-18 RCSB 
A1AP1 "Modify backbone"       2024-09-25 PDBE 
A1AP1 "Modify PCM"            2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1AP1 
_pdbx_chem_comp_pcm.modified_residue_id                DTY 
_pdbx_chem_comp_pcm.type                               Phosphorylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
