data_A1A21
# 
_chem_comp.id                                    A1A21 
_chem_comp.name                                  "(5-bromopyridin-3-yl){4-[(R)-(4-chlorophenyl)(phenyl)methyl]piperazin-1-yl}methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H21 Br Cl N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-08-21 
_chem_comp.pdbx_modified_date                    2024-11-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        470.789 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1A21 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8W1T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1A21 C1   C1  C  0 1 N N R N N N -19.462 2.222  -2.441 2.651  0.655  0.778  C1   A1A21 1  
A1A21 C2   C2  C  0 1 Y N N N N N -20.311 3.403  -2.880 3.892  -0.176 0.572  C2   A1A21 2  
A1A21 C3   C3  C  0 1 Y N N N N N -19.726 4.527  -3.451 4.238  -0.597 -0.698 C3   A1A21 3  
A1A21 C4   C4  C  0 1 Y N N N N N -20.495 5.603  -3.828 5.379  -1.354 -0.888 C4   A1A21 4  
A1A21 C5   C5  C  0 1 Y N N N N N -21.852 5.551  -3.627 6.174  -1.690 0.193  C5   A1A21 5  
A1A21 C6   C6  C  0 1 Y N N N N N -22.457 4.459  -3.058 5.827  -1.268 1.464  C6   A1A21 6  
A1A21 C7   C7  C  0 1 Y N N N N N -21.685 3.388  -2.682 4.686  -0.511 1.653  C7   A1A21 7  
A1A21 C8   C8  C  0 1 Y N N N N N -18.845 1.548  -3.659 2.941  2.089  0.415  C8   A1A21 8  
A1A21 C11  C9  C  0 1 Y N N N N N -17.729 0.300  -5.885 3.471  4.719  -0.250 C11  A1A21 9  
A1A21 C21  C10 C  0 1 N N N N N N -16.764 2.904  2.338  -2.098 -1.517 -0.696 C21  A1A21 10 
A1A21 C10  C11 C  0 1 Y N N N N N -19.002 -0.026 -5.478 3.212  3.794  -1.244 C10  A1A21 11 
A1A21 C12  C12 C  0 1 Y N N N N N -17.009 1.242  -5.191 3.471  4.328  1.076  C12  A1A21 12 
A1A21 C13  C13 C  0 1 Y N N N N N -17.565 1.868  -4.085 3.206  3.013  1.408  C13  A1A21 13 
A1A21 C16  C14 C  0 1 N N N N N N -19.020 3.432  -0.378 1.331  -1.285 0.179  C16  A1A21 14 
A1A21 C17  C15 C  0 1 N N N N N N -17.925 3.999  0.496  0.331  -1.822 -0.850 C17  A1A21 15 
A1A21 C19  C16 C  0 1 N N N N N N -16.631 1.968  0.023  -0.697 0.482  -0.934 C19  A1A21 16 
A1A21 C20  C17 C  0 1 N N N N N N -17.779 1.502  -0.843 0.343  0.929  0.098  C20  A1A21 17 
A1A21 C23  C18 C  0 1 Y N N N N N -15.956 1.760  2.886  -3.299 -0.661 -0.799 C23  A1A21 18 
A1A21 C24  C19 C  0 1 Y N N N N N -14.629 1.551  2.535  -3.348 0.383  -1.723 C24  A1A21 19 
A1A21 C26  C20 C  0 1 Y N N N N N -14.454 -0.297 3.882  -5.475 0.959  -1.050 C26  A1A21 20 
A1A21 C27  C21 C  0 1 Y N N N N N -15.760 -0.166 4.289  -5.507 -0.059 -0.112 C27  A1A21 21 
A1A21 C28  C22 C  0 1 Y N N N N N -16.527 0.867  3.797  -4.408 -0.889 0.024  C28  A1A21 22 
A1A21 C9   C23 C  0 1 Y N N N N N -19.558 0.596  -4.371 2.946  2.478  -0.911 C9   A1A21 23 
A1A21 N15  N1  N  0 1 N N N N N N -18.439 2.649  -1.466 1.571  0.142  -0.076 N15  A1A21 24 
A1A21 N18  N2  N  0 1 N N N N N N -17.085 2.925  1.033  -0.870 -0.974 -0.822 N18  A1A21 25 
A1A21 N25  N3  N  0 1 Y N N N N N -13.889 0.538  3.014  -4.417 1.146  -1.816 N25  A1A21 26 
A1A21 O22  O1  O  0 1 N N N N N N -17.105 3.807  3.097  -2.217 -2.711 -0.498 O22  A1A21 27 
A1A21 BR29 BR1 BR 0 0 N N N N N N -16.486 -1.396 5.526  -7.036 -0.312 0.971  BR29 A1A21 28 
A1A21 CL14 CL1 CL 0 0 N N N N N N -22.834 6.906  -4.095 7.607  -2.641 -0.045 CL14 A1A21 29 
A1A21 H1   H1  H  0 1 N N N N N N -20.125 1.493  -1.952 2.346  0.599  1.822  H1   A1A21 30 
A1A21 H2   H2  H  0 1 N N N N N N -18.657 4.556  -3.600 3.617  -0.336 -1.542 H2   A1A21 31 
A1A21 H3   H3  H  0 1 N N N N N N -20.039 6.474  -4.275 5.649  -1.684 -1.881 H3   A1A21 32 
A1A21 H4   H4  H  0 1 N N N N N N -23.526 4.442  -2.908 6.447  -1.530 2.308  H4   A1A21 33 
A1A21 H5   H5  H  0 1 N N N N N N -22.151 2.526  -2.228 4.418  -0.177 2.644  H5   A1A21 34 
A1A21 H6   H6  H  0 1 N N N N N N -17.296 -0.184 -6.748 3.679  5.747  -0.510 H6   A1A21 35 
A1A21 H7   H7  H  0 1 N N N N N N -19.569 -0.767 -6.022 3.211  4.099  -2.280 H7   A1A21 36 
A1A21 H8   H8  H  0 1 N N N N N N -16.008 1.496  -5.507 3.674  5.051  1.852  H8   A1A21 37 
A1A21 H9   H9  H  0 1 N N N N N N -16.995 2.613  -3.550 3.206  2.707  2.444  H9   A1A21 38 
A1A21 H10  H10 H  0 1 N N N N N N -19.613 4.257  -0.800 0.924  -1.411 1.182  H10  A1A21 39 
A1A21 H11  H11 H  0 1 N N N N N N -19.671 2.785  0.228  2.269  -1.833 0.095  H11  A1A21 40 
A1A21 H12  H12 H  0 1 N N N N N N -17.302 4.681  -0.102 0.777  -1.793 -1.844 H12  A1A21 41 
A1A21 H13  H13 H  0 1 N N N N N N -18.379 4.554  1.330  0.061  -2.848 -0.597 H13  A1A21 42 
A1A21 H14  H14 H  0 1 N N N N N N -16.186 1.098  0.528  -1.646 0.980  -0.737 H14  A1A21 43 
A1A21 H15  H15 H  0 1 N N N N N N -15.874 2.450  -0.613 -0.353 0.733  -1.938 H15  A1A21 44 
A1A21 H16  H16 H  0 1 N N N N N N -18.506 0.958  -0.222 0.566  1.987  -0.044 H16  A1A21 45 
A1A21 H17  H17 H  0 1 N N N N N N -17.394 0.834  -1.628 -0.050 0.772  1.102  H17  A1A21 46 
A1A21 H18  H18 H  0 1 N N N N N N -14.168 2.238  1.841  -2.501 0.568  -2.368 H18  A1A21 47 
A1A21 H19  H19 H  0 1 N N N N N N -13.864 -1.108 4.282  -6.331 1.609  -1.158 H19  A1A21 48 
A1A21 H20  H20 H  0 1 N N N N N N -17.554 0.985  4.110  -4.405 -1.691 0.747  H20  A1A21 49 
A1A21 H21  H21 H  0 1 N N N N N N -20.559 0.336  -4.059 2.744  1.755  -1.688 H21  A1A21 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1A21 C11  C10  DOUB Y N 1  
A1A21 C11  C12  SING Y N 2  
A1A21 C10  C9   SING Y N 3  
A1A21 C12  C13  DOUB Y N 4  
A1A21 C9   C8   DOUB Y N 5  
A1A21 CL14 C5   SING N N 6  
A1A21 C13  C8   SING Y N 7  
A1A21 C4   C5   DOUB Y N 8  
A1A21 C4   C3   SING Y N 9  
A1A21 C8   C1   SING N N 10 
A1A21 C5   C6   SING Y N 11 
A1A21 C3   C2   DOUB Y N 12 
A1A21 C6   C7   DOUB Y N 13 
A1A21 C2   C7   SING Y N 14 
A1A21 C2   C1   SING N N 15 
A1A21 C1   N15  SING N N 16 
A1A21 N15  C20  SING N N 17 
A1A21 N15  C16  SING N N 18 
A1A21 C20  C19  SING N N 19 
A1A21 C16  C17  SING N N 20 
A1A21 C19  N18  SING N N 21 
A1A21 C17  N18  SING N N 22 
A1A21 N18  C21  SING N N 23 
A1A21 C21  C23  SING N N 24 
A1A21 C21  O22  DOUB N N 25 
A1A21 C24  C23  DOUB Y N 26 
A1A21 C24  N25  SING Y N 27 
A1A21 C23  C28  SING Y N 28 
A1A21 N25  C26  DOUB Y N 29 
A1A21 C28  C27  DOUB Y N 30 
A1A21 C26  C27  SING Y N 31 
A1A21 C27  BR29 SING N N 32 
A1A21 C1   H1   SING N N 33 
A1A21 C3   H2   SING N N 34 
A1A21 C4   H3   SING N N 35 
A1A21 C6   H4   SING N N 36 
A1A21 C7   H5   SING N N 37 
A1A21 C11  H6   SING N N 38 
A1A21 C10  H7   SING N N 39 
A1A21 C12  H8   SING N N 40 
A1A21 C13  H9   SING N N 41 
A1A21 C16  H10  SING N N 42 
A1A21 C16  H11  SING N N 43 
A1A21 C17  H12  SING N N 44 
A1A21 C17  H13  SING N N 45 
A1A21 C19  H14  SING N N 46 
A1A21 C19  H15  SING N N 47 
A1A21 C20  H16  SING N N 48 
A1A21 C20  H17  SING N N 49 
A1A21 C24  H18  SING N N 50 
A1A21 C26  H19  SING N N 51 
A1A21 C28  H20  SING N N 52 
A1A21 C9   H21  SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1A21 SMILES           ACDLabs              14.52 "Brc1cc(cnc1)C(=O)N1CCN(CC1)C(c1ccc(Cl)cc1)c1ccccc1"                                                                                                  
A1A21 InChI            InChI                1.06  "InChI=1S/C23H21BrClN3O/c24-20-14-19(15-26-16-20)23(29)28-12-10-27(11-13-28)22(17-4-2-1-3-5-17)18-6-8-21(25)9-7-18/h1-9,14-16,22H,10-13H2/t22-/m1/s1" 
A1A21 InChIKey         InChI                1.06  HUHIPWIDNVSBFL-JOCHJYFZSA-N                                                                                                                           
A1A21 SMILES_CANONICAL CACTVS               3.385 "Clc1ccc(cc1)[C@H](N2CCN(CC2)C(=O)c3cncc(Br)c3)c4ccccc4"                                                                                              
A1A21 SMILES           CACTVS               3.385 "Clc1ccc(cc1)[CH](N2CCN(CC2)C(=O)c3cncc(Br)c3)c4ccccc4"                                                                                               
A1A21 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H](c2ccc(cc2)Cl)N3CCN(CC3)C(=O)c4cc(cnc4)Br"                                                                                            
A1A21 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(c2ccc(cc2)Cl)N3CCN(CC3)C(=O)c4cc(cnc4)Br"                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1A21 "SYSTEMATIC NAME" ACDLabs              14.52 "(5-bromopyridin-3-yl){4-[(R)-(4-chlorophenyl)(phenyl)methyl]piperazin-1-yl}methanone"        
A1A21 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5-bromanylpyridin-3-yl)-[4-[(~{R})-(4-chlorophenyl)-phenyl-methyl]piperazin-1-yl]methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1A21 "Create component" 2024-08-21 RCSB 
A1A21 "Initial release"  2024-11-20 RCSB 
# 
