data_9X1
#

_chem_comp.id                                   9X1
_chem_comp.name                                 "1,1'-[[1,1'-biphenyl]-4,4'-diylbis(methylene)]bis{4-[(4-chlorophenyl)(methyl)amino]quinolin-1-ium}"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C46 H38 Cl2 N4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        TCD-717
_chem_comp.pdbx_formal_charge                   2
_chem_comp.pdbx_initial_date                    2017-06-21
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       717.727
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9X1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5W6O
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9X1  C1   C1   C   0  1  Y  N  N   -2.830  -17.376  31.928  -6.817  -2.948  -0.420  C1   9X1   1  
9X1  C2   C2   C   0  1  Y  N  N   -2.148  -16.452  32.730  -7.242  -4.269  -0.473  C2   9X1   2  
9X1  C3   C3   C   0  1  Y  N  N   -1.015  -16.839  33.444  -6.316  -5.287  -0.585  C3   9X1   3  
9X1  C4   C4   C   0  1  Y  N  N   -0.541  -18.140  33.370  -4.965  -4.992  -0.646  C4   9X1   4  
9X1  C5   C5   C   0  1  Y  N  N   -1.190  -19.071  32.587  -4.538  -3.677  -0.593  C5   9X1   5  
9X1  C6   C6   C   0  1  Y  N  N   -2.324  -18.692  31.866  -5.460  -2.654  -0.481  C6   9X1   6  
9X1  C22  C7   C   0  1  Y  N  N   -3.960  -12.656  24.746  -2.442   3.656   0.990  C22  9X1   7  
9X1  C24  C8   C   0  1  Y  N  N   -6.128  -13.612  25.111  -2.469   3.433  -1.409  C24  9X1   8  
9X1  C25  C9   C   0  1  Y  N  N   -6.059  -13.243  26.470  -3.848   3.392  -1.384  C25  9X1   9  
9X1  C26  C10  C   0  1  Y  N  N   -5.071  -13.596  22.877  -0.273   3.609  -0.240  C26  9X1  10  
9X1  C27  C11  C   0  1  Y  N  N   -5.163  -14.832  22.213   0.412   3.518  -1.450  C27  9X1  11  
9X1  C32  C12  C   0  1  N  N  N   -5.094  -13.692  18.613   4.000   3.738  -0.300  C32  9X1  12  
9X1  N33  N1   N   1  1  Y  N  N   -5.389  -12.315  17.987   4.533   2.399  -0.036  N33  9X1  13  
9X1  C34  C13  C   0  1  Y  N  N   -4.275  -11.571  17.490   4.820   2.057   1.199  C34  9X1  14  
9X1  C35  C14  C   0  1  Y  N  N   -4.445  -10.307  16.930   5.327   0.803   1.513  C35  9X1  15  
9X1  C36  C15  C   0  1  Y  N  N   -5.723   -9.730  16.804   5.542  -0.123   0.504  C36  9X1  16  
9X1  C37  C16  C   0  1  Y  N  N   -6.842  -10.469  17.319   5.228   0.259  -0.823  C37  9X1  17  
9X1  CL7  CL1  CL  0  0  N  N  N    0.815  -18.582  34.236  -3.803  -6.274  -0.787  CL7  9X1  18  
9X1  N1   N2   N   0  1  N  N  N   -3.910  -17.037  31.200  -7.752  -1.915  -0.312  N1   9X1  19  
9X1  C8   C17  C   0  1  N  N  N   -4.952  -18.104  31.054  -9.183  -2.226  -0.254  C8   9X1  20  
9X1  C9   C18  C   0  1  Y  N  N   -4.031  -15.836  30.507  -7.326  -0.596  -0.260  C9   9X1  21  
9X1  C10  C19  C   0  1  Y  N  N   -5.289  -15.233  30.428  -7.169   0.151  -1.418  C10  9X1  22  
9X1  C11  C20  C   0  1  Y  N  N   -5.510  -14.058  29.747  -6.742   1.469  -1.332  C11  9X1  23  
9X1  C14  C21  C   0  1  Y  N  N   -2.941  -15.172  29.836  -7.044   0.032   0.976  C14  9X1  24  
9X1  C15  C22  C   0  1  Y  N  N   -1.603  -15.636  29.796  -7.183  -0.653   2.191  C15  9X1  25  
9X1  C16  C23  C   0  1  Y  N  N   -0.569  -14.963  29.129  -6.900  -0.014   3.361  C16  9X1  26  
9X1  C17  C24  C   0  1  Y  N  N   -0.819  -13.782  28.478  -6.476   1.312   3.365  C17  9X1  27  
9X1  C18  C25  C   0  1  Y  N  N   -2.115  -13.307  28.498  -6.331   2.006   2.203  C18  9X1  28  
9X1  C13  C26  C   0  1  Y  N  N   -3.195  -13.954  29.145  -6.612   1.380   0.977  C13  9X1  29  
9X1  N12  N3   N   1  1  Y  N  N   -4.456  -13.413  29.115  -6.477   2.039  -0.180  N12  9X1  30  
9X1  C19  C27  C   0  1  N  N  N   -4.828  -12.175  28.367  -6.029   3.433  -0.159  C19  9X1  31  
9X1  C20  C28  C   0  1  Y  N  N   -4.941  -12.554  26.980  -4.523   3.478  -0.180  C20  9X1  32  
9X1  C21  C29  C   0  1  Y  N  N   -3.905  -12.282  26.079  -3.821   3.615   1.004  C21  9X1  33  
9X1  C23  C30  C   0  1  Y  N  N   -5.063  -13.336  24.244  -1.756   3.565  -0.219  C23  9X1  34  
9X1  C31  C31  C   0  1  Y  N  N   -5.005  -12.437  22.110   0.439   3.736   0.951  C31  9X1  35  
9X1  C30  C32  C   0  1  Y  N  N   -4.998  -12.480  20.731   1.819   3.776   0.925  C30  9X1  36  
9X1  C28  C33  C   0  1  Y  N  N   -5.165  -14.872  20.790   1.792   3.559  -1.463  C28  9X1  37  
9X1  C29  C34  C   0  1  Y  N  N   -5.087  -13.689  20.035   2.494   3.692  -0.279  C29  9X1  38  
9X1  C38  C35  C   0  1  Y  N  N   -6.642  -11.758  17.902   4.710   1.554  -1.058  C38  9X1  39  
9X1  C39  C36  C   0  1  Y  N  N   -7.766  -12.461  18.387   4.398   1.936  -2.375  C39  9X1  40  
9X1  C40  C37  C   0  1  Y  N  N   -9.057  -11.936  18.331   4.597   1.060  -3.397  C40  9X1  41  
9X1  C41  C38  C   0  1  Y  N  N   -9.266  -10.690  17.761   5.107  -0.214  -3.162  C41  9X1  42  
9X1  C42  C39  C   0  1  Y  N  N   -8.176   -9.981  17.267   5.417  -0.620  -1.898  C42  9X1  43  
9X1  N43  N4   N   0  1  N  N  N   -5.899   -8.458  16.263   6.049  -1.383   0.785  N43  9X1  44  
9X1  C44  C40  C   0  1  N  N  N   -6.583   -7.418  17.104   5.136  -2.489   1.087  C44  9X1  45  
9X1  C45  C41  C   0  1  Y  N  N   -5.317   -8.006  15.091   7.430  -1.598   0.781  C45  9X1  46  
9X1  C46  C42  C   0  1  Y  N  N   -5.498   -6.650  14.690   7.939  -2.859   1.063  C46  9X1  47  
9X1  C47  C43  C   0  1  Y  N  N   -4.927   -6.118  13.543   9.304  -3.069   1.058  C47  9X1  48  
9X1  C48  C44  C   0  1  Y  N  N   -4.144   -6.926  12.735  10.165  -2.023   0.773  C48  9X1  49  
9X1  CL5  CL2  CL  0  0  N  N  N   -3.491   -6.266  11.365  11.880  -2.289   0.776  CL5  9X1  50  
9X1  C49  C45  C   0  1  Y  N  N   -3.926   -8.259  13.081   9.660  -0.766   0.492  C49  9X1  51  
9X1  C50  C46  C   0  1  Y  N  N   -4.499   -8.791  14.239   8.296  -0.552   0.490  C50  9X1  52  
9X1  H1   H1   H   0  1  N  N  N   -2.502  -15.434  32.796  -8.296  -4.500  -0.425  H1   9X1  53  
9X1  H2   H2   H   0  1  N  N  N   -0.501  -16.118  34.062  -6.646  -6.315  -0.625  H2   9X1  54  
9X1  H3   H3   H   0  1  N  N  N   -0.824  -20.086  32.532  -3.484  -3.449  -0.640  H3   9X1  55  
9X1  H4   H4   H   0  1  N  N  N   -2.825  -19.422  31.247  -5.127  -1.628  -0.441  H4   9X1  56  
9X1  H5   H5   H   0  1  N  N  N   -3.136  -12.416  24.090  -1.895   3.763   1.916  H5   9X1  57  
9X1  H6   H6   H   0  1  N  N  N   -7.009  -14.111  24.736  -1.943   3.367  -2.350  H6   9X1  58  
9X1  H7   H7   H   0  1  N  N  N   -6.876  -13.492  27.131  -4.401   3.295  -2.307  H7   9X1  59  
9X1  H8   H8   H   0  1  N  N  N   -5.232  -15.748  22.781  -0.135   3.414  -2.375  H8   9X1  60  
9X1  H9   H9   H   0  1  N  N  N   -5.864  -14.400  18.272   4.353   4.427   0.467  H9   9X1  61  
9X1  H10  H10  H   0  1  N  N  N   -4.107  -14.027  18.263   4.339   4.077  -1.278  H10  9X1  62  
9X1  H11  H11  H   0  1  N  N  N   -3.284  -11.996  17.550   4.656   2.770   1.992  H11  9X1  63  
9X1  H12  H12  H   0  1  N  N  N   -3.580   -9.759  16.586   5.554   0.551   2.538  H12  9X1  64  
9X1  H13  H13  H   0  1  N  N  N   -4.681  -18.970  31.676  -9.483  -2.361   0.785  H13  9X1  65  
9X1  H14  H14  H   0  1  N  N  N   -5.927  -17.711  31.378  -9.751  -1.405  -0.693  H14  9X1  66  
9X1  H15  H15  H   0  1  N  N  N   -5.014  -18.414  30.000  -9.379  -3.142  -0.811  H15  9X1  67  
9X1  H16  H16  H   0  1  N  N  N   -6.123  -15.709  30.922  -7.379  -0.290  -2.381  H16  9X1  68  
9X1  H17  H17  H   0  1  N  N  N   -6.504  -13.638  29.704  -6.622   2.041  -2.240  H17  9X1  69  
9X1  H18  H18  H   0  1  N  N  N   -1.366  -16.558  30.307  -7.512  -1.682   2.200  H18  9X1  70  
9X1  H19  H19  H   0  1  N  N  N    0.429  -15.377  29.128  -7.008  -0.543   4.297  H19  9X1  71  
9X1  H20  H20  H   0  1  N  N  N   -0.032  -13.244  27.969  -6.259   1.797   4.305  H20  9X1  72  
9X1  H21  H21  H   0  1  N  N  N   -2.319  -12.379  27.985  -6.001   3.034   2.224  H21  9X1  73  
9X1  H22  H22  H   0  1  N  N  N   -4.049  -11.408  28.489  -6.420   3.954  -1.033  H22  9X1  74  
9X1  H23  H23  H   0  1  N  N  N   -5.788  -11.783  28.734  -6.394   3.919   0.746  H23  9X1  75  
9X1  H24  H24  H   0  1  N  N  N   -3.029  -11.761  26.436  -4.354   3.689   1.941  H24  9X1  76  
9X1  H25  H25  H   0  1  N  N  N   -4.958  -11.479  22.607  -0.087   3.803   1.891  H25  9X1  77  
9X1  H26  H26  H   0  1  N  N  N   -4.922  -11.557  20.176   2.372   3.875   1.848  H26  9X1  78  
9X1  H27  H27  H   0  1  N  N  N   -5.227  -15.824  20.284   2.324   3.489  -2.400  H27  9X1  79  
9X1  H28  H28  H   0  1  N  N  N   -7.621  -13.441  18.817   4.001   2.920  -2.574  H28  9X1  80  
9X1  H29  H29  H   0  1  N  N  N   -9.889  -12.497  18.730   4.355   1.357  -4.407  H29  9X1  81  
9X1  H30  H30  H   0  1  N  N  N  -10.261  -10.275  17.701   5.256  -0.891  -3.991  H30  9X1  82  
9X1  H31  H31  H   0  1  N  N  N   -8.352   -9.013  16.822   5.808  -1.612  -1.727  H31  9X1  83  
9X1  H32  H32  H   0  1  N  N  N   -7.005   -7.892  18.003   4.870  -3.002   0.163  H32  9X1  84  
9X1  H33  H33  H   0  1  N  N  N   -5.854   -6.650  17.402   5.625  -3.189   1.764  H33  9X1  85  
9X1  H34  H34  H   0  1  N  N  N   -7.391   -6.950  16.523   4.235  -2.097   1.558  H34  9X1  86  
9X1  H35  H35  H   0  1  N  N  N   -6.108   -6.007  15.308   7.267  -3.675   1.286  H35  9X1  87  
9X1  H36  H36  H   0  1  N  N  N   -5.092   -5.083  13.282   9.700  -4.049   1.278  H36  9X1  88  
9X1  H37  H37  H   0  1  N  N  N   -3.311   -8.884  12.450  10.335   0.049   0.271  H37  9X1  89  
9X1  H38  H38  H   0  1  N  N  N   -4.315   -9.825  14.491   7.903   0.430   0.270  H38  9X1  90  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9X1  CL5  C48  SING  N  N   1  
9X1  C48  C49  DOUB  Y  N   2  
9X1  C48  C47  SING  Y  N   3  
9X1  C49  C50  SING  Y  N   4  
9X1  C47  C46  DOUB  Y  N   5  
9X1  C50  C45  DOUB  Y  N   6  
9X1  C46  C45  SING  Y  N   7  
9X1  C45  N43  SING  N  N   8  
9X1  N43  C36  SING  N  N   9  
9X1  N43  C44  SING  N  N  10  
9X1  C36  C35  DOUB  Y  N  11  
9X1  C36  C37  SING  Y  N  12  
9X1  C35  C34  SING  Y  N  13  
9X1  C42  C37  DOUB  Y  N  14  
9X1  C42  C41  SING  Y  N  15  
9X1  C37  C38  SING  Y  N  16  
9X1  C34  N33  DOUB  Y  N  17  
9X1  C41  C40  DOUB  Y  N  18  
9X1  C38  N33  SING  Y  N  19  
9X1  C38  C39  DOUB  Y  N  20  
9X1  N33  C32  SING  N  N  21  
9X1  C40  C39  SING  Y  N  22  
9X1  C32  C29  SING  N  N  23  
9X1  C29  C30  DOUB  Y  N  24  
9X1  C29  C28  SING  Y  N  25  
9X1  C30  C31  SING  Y  N  26  
9X1  C28  C27  DOUB  Y  N  27  
9X1  C31  C26  DOUB  Y  N  28  
9X1  C27  C26  SING  Y  N  29  
9X1  C26  C23  SING  N  N  30  
9X1  C23  C22  DOUB  Y  N  31  
9X1  C23  C24  SING  Y  N  32  
9X1  C22  C21  SING  Y  N  33  
9X1  C24  C25  DOUB  Y  N  34  
9X1  C21  C20  DOUB  Y  N  35  
9X1  C25  C20  SING  Y  N  36  
9X1  C20  C19  SING  N  N  37  
9X1  C19  N12  SING  N  N  38  
9X1  C17  C18  DOUB  Y  N  39  
9X1  C17  C16  SING  Y  N  40  
9X1  C18  C13  SING  Y  N  41  
9X1  N12  C13  DOUB  Y  N  42  
9X1  N12  C11  SING  Y  N  43  
9X1  C16  C15  DOUB  Y  N  44  
9X1  C13  C14  SING  Y  N  45  
9X1  C11  C10  DOUB  Y  N  46  
9X1  C15  C14  SING  Y  N  47  
9X1  C14  C9   DOUB  Y  N  48  
9X1  C10  C9   SING  Y  N  49  
9X1  C9   N1   SING  N  N  50  
9X1  C8   N1   SING  N  N  51  
9X1  N1   C1   SING  N  N  52  
9X1  C6   C1   DOUB  Y  N  53  
9X1  C6   C5   SING  Y  N  54  
9X1  C1   C2   SING  Y  N  55  
9X1  C5   C4   DOUB  Y  N  56  
9X1  C2   C3   DOUB  Y  N  57  
9X1  C4   C3   SING  Y  N  58  
9X1  C4   CL7  SING  N  N  59  
9X1  C2   H1   SING  N  N  60  
9X1  C3   H2   SING  N  N  61  
9X1  C5   H3   SING  N  N  62  
9X1  C6   H4   SING  N  N  63  
9X1  C22  H5   SING  N  N  64  
9X1  C24  H6   SING  N  N  65  
9X1  C25  H7   SING  N  N  66  
9X1  C27  H8   SING  N  N  67  
9X1  C32  H9   SING  N  N  68  
9X1  C32  H10  SING  N  N  69  
9X1  C34  H11  SING  N  N  70  
9X1  C35  H12  SING  N  N  71  
9X1  C8   H13  SING  N  N  72  
9X1  C8   H14  SING  N  N  73  
9X1  C8   H15  SING  N  N  74  
9X1  C10  H16  SING  N  N  75  
9X1  C11  H17  SING  N  N  76  
9X1  C15  H18  SING  N  N  77  
9X1  C16  H19  SING  N  N  78  
9X1  C17  H20  SING  N  N  79  
9X1  C18  H21  SING  N  N  80  
9X1  C19  H22  SING  N  N  81  
9X1  C19  H23  SING  N  N  82  
9X1  C21  H24  SING  N  N  83  
9X1  C31  H25  SING  N  N  84  
9X1  C30  H26  SING  N  N  85  
9X1  C28  H27  SING  N  N  86  
9X1  C39  H28  SING  N  N  87  
9X1  C40  H29  SING  N  N  88  
9X1  C41  H30  SING  N  N  89  
9X1  C42  H31  SING  N  N  90  
9X1  C44  H32  SING  N  N  91  
9X1  C44  H33  SING  N  N  92  
9X1  C44  H34  SING  N  N  93  
9X1  C46  H35  SING  N  N  94  
9X1  C47  H36  SING  N  N  95  
9X1  C49  H37  SING  N  N  96  
9X1  C50  H38  SING  N  N  97  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9X1  SMILES            ACDLabs               12.01  "c1(ccc(Cl)cc1)N(C)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c8ccc(C[n+]5ccc(c6c5cccc6)N(C)c7ccc(cc7)Cl)cc8"  
9X1  InChI             InChI                 1.03   "InChI=1S/C46H38Cl2N4/c1-49(39-23-19-37(47)20-24-39)43-27-29-51(45-9-5-3-7-41(43)45)31-33-11-15-35(16-12-33)36-17-13-34(14-18-36)32-52-30-28-44(42-8-4-6-10-46(42)52)50(2)40-25-21-38(48)22-26-40/h3-30H,31-32H2,1-2H3/q+2"  
9X1  InChIKey          InChI                 1.03   QGYGTMZEJNOHNU-UHFFFAOYSA-N  
9X1  SMILES_CANONICAL  CACTVS                3.385  "CN(c1ccc(Cl)cc1)c2cc[n+](Cc3ccc(cc3)c4ccc(C[n+]5ccc(N(C)c6ccc(Cl)cc6)c7ccccc57)cc4)c8ccccc28"  
9X1  SMILES            CACTVS                3.385  "CN(c1ccc(Cl)cc1)c2cc[n+](Cc3ccc(cc3)c4ccc(C[n+]5ccc(N(C)c6ccc(Cl)cc6)c7ccccc57)cc4)c8ccccc28"  
9X1  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CN(c1ccc(cc1)Cl)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c5ccc(cc5)C[n+]6ccc(c7c6cccc7)N(C)c8ccc(cc8)Cl"  
9X1  SMILES            "OpenEye OEToolkits"  2.0.6  "CN(c1ccc(cc1)Cl)c2cc[n+](c3c2cccc3)Cc4ccc(cc4)c5ccc(cc5)C[n+]6ccc(c7c6cccc7)N(C)c8ccc(cc8)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9X1  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,1'-[[1,1'-biphenyl]-4,4'-diylbis(methylene)]bis{4-[(4-chlorophenyl)(methyl)amino]quinolin-1-ium}"  
9X1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-(4-chlorophenyl)-1-[[4-[4-[[4-[(4-chlorophenyl)-methyl-amino]quinolin-1-ium-1-yl]methyl]phenyl]phenyl]methyl]-~{N}-methyl-quinolin-1-ium-4-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9X1  "Create component"  2017-06-21  RCSB  
9X1  "Initial release"   2018-02-14  RCSB  
9X1  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     9X1
_pdbx_chem_comp_synonyms.name        TCD-717
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
