data_8K1
# 
_chem_comp.id                                    8K1 
_chem_comp.name                                  "5'-O-[(R)-hydroxy{[(7beta,8alpha,9beta,10alpha,11beta,13alpha)-7-hydroxy-19-oxo-11,16-epoxykauran-19-yl]oxy}phosphoryl]adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H42 N5 O10 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-10 
_chem_comp.pdbx_modified_date                    2017-02-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        663.656 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8K1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5UPS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8K1 C11 C1  C 0 1 N N R 26.138 87.988 23.041 -2.813  0.040  -1.674 C11 8K1 1  
8K1 C12 C2  C 0 1 N N N 25.376 86.677 23.314 -2.615  -0.825 -2.944 C12 8K1 2  
8K1 C13 C3  C 0 1 N N N 27.536 87.816 23.654 -2.319  1.441  -2.030 C13 8K1 3  
8K1 C14 C4  C 0 1 N N N 28.441 89.002 23.381 -2.766  2.483  -1.013 C14 8K1 4  
8K1 C15 C5  C 0 1 N N N 28.543 89.230 21.873 -4.287  2.471  -0.884 C15 8K1 5  
8K1 C16 C6  C 0 1 N N R 27.200 89.408 21.151 -4.753  1.106  -0.354 C16 8K1 6  
8K1 C18 C7  C 0 1 N N S 26.278 88.254 21.537 -4.281  0.019  -1.317 C18 8K1 7  
8K1 C19 C8  C 0 1 N N N 24.968 88.256 20.743 -4.750  -1.348 -0.820 C19 8K1 8  
8K1 C20 C9  C 0 1 N N R 25.270 88.003 19.266 -6.280  -1.396 -0.923 C20 8K1 9  
8K1 C21 C10 C 0 1 N N R 26.204 89.061 18.687 -6.915  -0.269 -0.152 C21 8K1 10 
8K1 C22 C11 C 0 1 N N N 25.548 90.380 18.275 -7.104  -0.606 1.339  C22 8K1 11 
8K1 C23 C12 C 0 1 N N S 27.425 89.314 19.619 -6.274  1.092  -0.351 C23 8K1 12 
8K1 C25 C13 C 0 1 N N N 27.587 91.669 18.562 -7.092  1.751  1.974  C25 8K1 13 
8K1 C28 C14 C 0 1 N N N 27.866 90.006 15.474 -10.380 0.940  0.743  C28 8K1 14 
8K1 O8  O1  O 0 1 N N N 25.351 89.567 27.551 0.150   -0.336 1.719  O8  8K1 15 
8K1 P   P1  P 0 1 N N N 24.698 89.879 26.250 0.250   -1.276 0.416  P   8K1 16 
8K1 O7  O2  O 0 1 N N N 24.516 91.403 25.969 -0.279  -2.621 0.736  O7  8K1 17 
8K1 O2  O3  O 0 1 N N N 23.306 89.070 26.172 1.790   -1.400 -0.040 O2  8K1 18 
8K1 C9  C15 C 0 1 N N N 23.339 87.704 26.579 2.790   -2.031 0.762  C9  8K1 19 
8K1 C8  C16 C 0 1 N N R 21.965 87.114 26.359 4.136   -1.975 0.035  C8  8K1 20 
8K1 C7  C17 C 0 1 N N S 21.933 85.650 26.690 5.206   -2.760 0.825  C7  8K1 21 
8K1 O1  O4  O 0 1 N N N 21.707 85.402 28.074 5.375   -4.068 0.275  O1  8K1 22 
8K1 C6  C18 C 0 1 N N R 20.836 85.166 25.786 6.494   -1.926 0.642  C6  8K1 23 
8K1 O   O5  O 0 1 N N N 19.548 85.397 26.352 7.497   -2.694 -0.026 O   8K1 24 
8K1 O9  O6  O 0 1 N N N 21.676 87.214 24.969 4.629   -0.618 -0.005 O9  8K1 25 
8K1 C5  C19 C 0 1 N N R 21.000 86.036 24.550 6.049   -0.736 -0.236 C5  8K1 26 
8K1 N4  N1  N 0 1 Y N N 21.747 85.363 23.480 6.737   0.489  0.179  N4  8K1 27 
8K1 C2  C20 C 0 1 Y N N 21.543 85.628 22.187 7.951   0.935  -0.280 C2  8K1 28 
8K1 N2  N2  N 0 1 Y N N 20.716 86.458 21.506 8.846   0.485  -1.153 N2  8K1 29 
8K1 C1  C21 C 0 1 Y N N 20.737 86.490 20.148 9.952   1.160  -1.388 C1  8K1 30 
8K1 N1  N3  N 0 1 Y N N 21.571 85.717 19.400 10.230  2.299  -0.780 N1  8K1 31 
8K1 C4  C22 C 0 1 Y N N 22.704 84.386 23.585 6.285   1.399  1.089  C4  8K1 32 
8K1 N3  N4  N 0 1 Y N N 23.143 84.022 22.359 7.148   2.365  1.217  N3  8K1 33 
8K1 C3  C23 C 0 1 Y N N 22.444 84.739 21.452 8.200   2.143  0.393  C3  8K1 34 
8K1 C   C24 C 0 1 Y N N 22.416 84.840 19.978 9.395   2.826  0.109  C   8K1 35 
8K1 N   N5  N 0 1 N N N 23.233 84.076 19.246 9.694   4.021  0.740  N   8K1 36 
8K1 O3  O7  O 0 1 N N N 25.665 89.187 25.170 -0.613  -0.630 -0.780 O3  8K1 37 
8K1 C10 C25 C 0 1 N N N 25.305 88.963 23.800 -1.941  -0.553 -0.599 C10 8K1 38 
8K1 O6  O8  O 0 1 N N N 24.300 89.476 23.334 -2.436  -0.959 0.425  O6  8K1 39 
8K1 O4  O9  O 0 1 N N N 24.045 87.936 18.547 -6.746  -2.651 -0.418 O4  8K1 40 
8K1 C29 C26 C 0 1 N N N 26.778 88.630 17.347 -8.407  -0.082 -0.574 C29 8K1 41 
8K1 C27 C27 C 0 1 N N S 27.533 89.896 16.954 -8.866  0.926  0.520  C27 8K1 42 
8K1 O5  O10 O 0 1 N N N 28.743 89.925 17.722 -8.335  2.210  0.095  O5  8K1 43 
8K1 C26 C28 C 0 1 N N S 26.683 91.037 17.531 -8.058  0.539  1.796  C26 8K1 44 
8K1 C24 C29 C 0 1 N N S 28.321 90.409 18.995 -6.929  2.179  0.495  C24 8K1 45 
8K1 C17 C30 C 0 1 N N N 26.665 90.786 21.598 -4.191  0.907  1.048  C17 8K1 46 
8K1 H1  H1  H 0 1 N N N 25.295 86.519 24.400 -1.559  -0.839 -3.213 H1  8K1 47 
8K1 H2  H2  H 0 1 N N N 24.369 86.741 22.876 -2.953  -1.843 -2.747 H2  8K1 48 
8K1 H3  H3  H 0 1 N N N 25.920 85.835 22.861 -3.194  -0.403 -3.765 H3  8K1 49 
8K1 H4  H4  H 0 1 N N N 27.431 87.696 24.742 -1.224  1.429  -2.074 H4  8K1 50 
8K1 H5  H5  H 0 1 N N N 27.999 86.914 23.228 -2.695  1.713  -3.021 H5  8K1 51 
8K1 H6  H6  H 0 1 N N N 29.442 88.801 23.790 -2.288  2.316  -0.054 H6  8K1 52 
8K1 H7  H7  H 0 1 N N N 28.023 89.900 23.860 -2.458  3.477  -1.371 H7  8K1 53 
8K1 H8  H8  H 0 1 N N N 29.056 88.363 21.431 -4.603  3.253  -0.196 H8  8K1 54 
8K1 H9  H9  H 0 1 N N N 29.143 90.136 21.705 -4.738  2.642  -1.863 H9  8K1 55 
8K1 H10 H10 H 0 1 N N N 26.806 87.364 21.165 -4.840  0.200  -2.270 H10 8K1 56 
8K1 H11 H11 H 0 1 N N N 24.473 89.232 20.855 -4.338  -2.141 -1.447 H11 8K1 57 
8K1 H12 H12 H 0 1 N N N 24.307 87.463 21.124 -4.450  -1.524 0.208  H12 8K1 58 
8K1 H13 H13 H 0 1 N N N 25.781 87.032 19.193 -6.566  -1.313 -1.976 H13 8K1 59 
8K1 H14 H14 H 0 1 N N N 25.242 90.971 19.151 -7.599  -1.579 1.462  H14 8K1 60 
8K1 H15 H15 H 0 1 N N N 24.678 90.214 17.622 -6.172  -0.597 1.894  H15 8K1 61 
8K1 H16 H16 H 0 1 N N N 28.024 88.399 19.506 -6.549  1.372  -1.408 H16 8K1 62 
8K1 H17 H17 H 0 1 N N N 28.264 92.416 18.122 -7.582  2.546  2.555  H17 8K1 63 
8K1 H18 H18 H 0 1 N N N 27.022 92.127 19.387 -6.170  1.466  2.461  H18 8K1 64 
8K1 H19 H19 H 0 1 N N N 28.407 90.946 15.288 -10.713 -0.055 1.036  H19 8K1 65 
8K1 H20 H20 H 0 1 N N N 28.496 89.155 15.176 -10.625 1.652  1.531  H20 8K1 66 
8K1 H21 H21 H 0 1 N N N 26.936 89.996 14.887 -10.880 1.234  -0.180 H21 8K1 67 
8K1 H22 H22 H 0 1 N N N 25.554 90.376 28.006 0.481   0.562  1.582  H22 8K1 68 
8K1 H23 H23 H 0 1 N N N 24.081 87.155 25.981 2.871   -1.513 1.717  H23 8K1 69 
8K1 H24 H24 H 0 1 N N N 23.606 87.639 27.644 2.514   -3.071 0.935  H24 8K1 70 
8K1 H25 H25 H 0 1 N N N 21.221 87.656 26.962 4.039   -2.375 -0.974 H25 8K1 71 
8K1 H26 H26 H 0 1 N N N 22.883 85.192 26.376 4.935   -2.822 1.879  H26 8K1 72 
8K1 H27 H27 H 0 1 N N N 22.439 85.734 28.579 6.036   -4.605 0.733  H27 8K1 73 
8K1 H28 H28 H 0 1 N N N 20.985 84.107 25.530 6.862   -1.576 1.607  H28 8K1 74 
8K1 H29 H29 H 0 1 N N N 19.440 84.856 27.125 7.770   -3.487 0.454  H29 8K1 75 
8K1 H30 H30 H 0 1 N N N 19.999 86.298 24.177 6.247   -0.945 -1.287 H30 8K1 76 
8K1 H31 H31 H 0 1 N N N 20.060 87.160 19.638 10.658  0.767  -2.104 H31 8K1 77 
8K1 H32 H32 H 0 1 N N N 23.057 83.967 24.516 5.350   1.328  1.624  H32 8K1 78 
8K1 H33 H33 H 0 1 N N N 23.096 84.275 18.276 10.522  4.483  0.536  H33 8K1 79 
8K1 H34 H34 H 0 1 N N N 24.182 84.269 19.495 9.077   4.395  1.388  H34 8K1 80 
8K1 H35 H35 H 0 1 N N N 23.488 87.270 18.932 -6.402  -3.418 -0.895 H35 8K1 81 
8K1 H36 H36 H 0 1 N N N 25.985 88.388 16.624 -8.468  0.350  -1.572 H36 8K1 82 
8K1 H37 H37 H 0 1 N N N 27.454 87.769 17.452 -8.944  -1.025 -0.507 H37 8K1 83 
8K1 H38 H38 H 0 1 N N N 26.343 91.746 16.761 -8.668  0.307  2.667  H38 8K1 84 
8K1 H39 H39 H 0 1 N N N 29.165 90.649 19.659 -6.459  3.154  0.380  H39 8K1 85 
8K1 H40 H40 H 0 1 N N N 26.527 90.790 22.689 -3.102  0.934  1.010  H40 8K1 86 
8K1 H41 H41 H 0 1 N N N 27.386 91.568 21.317 -4.552  1.702  1.701  H41 8K1 87 
8K1 H42 H42 H 0 1 N N N 25.701 90.982 21.106 -4.517  -0.058 1.436  H42 8K1 88 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8K1 C28 C27 SING N N 1  
8K1 C27 C29 SING N N 2  
8K1 C27 C26 SING N N 3  
8K1 C27 O5  SING N N 4  
8K1 C29 C21 SING N N 5  
8K1 C26 C22 SING N N 6  
8K1 C26 C25 SING N N 7  
8K1 O5  C24 SING N N 8  
8K1 C22 C21 SING N N 9  
8K1 O4  C20 SING N N 10 
8K1 C25 C24 SING N N 11 
8K1 C21 C20 SING N N 12 
8K1 C21 C23 SING N N 13 
8K1 C24 C23 SING N N 14 
8K1 N   C   SING N N 15 
8K1 C20 C19 SING N N 16 
8K1 N1  C   DOUB Y N 17 
8K1 N1  C1  SING Y N 18 
8K1 C23 C16 SING N N 19 
8K1 C   C3  SING Y N 20 
8K1 C1  N2  DOUB Y N 21 
8K1 C19 C18 SING N N 22 
8K1 C16 C18 SING N N 23 
8K1 C16 C17 SING N N 24 
8K1 C16 C15 SING N N 25 
8K1 C3  C2  DOUB Y N 26 
8K1 C3  N3  SING Y N 27 
8K1 N2  C2  SING Y N 28 
8K1 C18 C11 SING N N 29 
8K1 C15 C14 SING N N 30 
8K1 C2  N4  SING Y N 31 
8K1 N3  C4  DOUB Y N 32 
8K1 C11 C12 SING N N 33 
8K1 C11 C13 SING N N 34 
8K1 C11 C10 SING N N 35 
8K1 O6  C10 DOUB N N 36 
8K1 C14 C13 SING N N 37 
8K1 N4  C4  SING Y N 38 
8K1 N4  C5  SING N N 39 
8K1 C10 O3  SING N N 40 
8K1 C5  O9  SING N N 41 
8K1 C5  C6  SING N N 42 
8K1 O9  C8  SING N N 43 
8K1 O3  P   SING N N 44 
8K1 C6  O   SING N N 45 
8K1 C6  C7  SING N N 46 
8K1 O7  P   DOUB N N 47 
8K1 O2  P   SING N N 48 
8K1 O2  C9  SING N N 49 
8K1 P   O8  SING N N 50 
8K1 C8  C9  SING N N 51 
8K1 C8  C7  SING N N 52 
8K1 C7  O1  SING N N 53 
8K1 C12 H1  SING N N 54 
8K1 C12 H2  SING N N 55 
8K1 C12 H3  SING N N 56 
8K1 C13 H4  SING N N 57 
8K1 C13 H5  SING N N 58 
8K1 C14 H6  SING N N 59 
8K1 C14 H7  SING N N 60 
8K1 C15 H8  SING N N 61 
8K1 C15 H9  SING N N 62 
8K1 C18 H10 SING N N 63 
8K1 C19 H11 SING N N 64 
8K1 C19 H12 SING N N 65 
8K1 C20 H13 SING N N 66 
8K1 C22 H14 SING N N 67 
8K1 C22 H15 SING N N 68 
8K1 C23 H16 SING N N 69 
8K1 C25 H17 SING N N 70 
8K1 C25 H18 SING N N 71 
8K1 C28 H19 SING N N 72 
8K1 C28 H20 SING N N 73 
8K1 C28 H21 SING N N 74 
8K1 O8  H22 SING N N 75 
8K1 C9  H23 SING N N 76 
8K1 C9  H24 SING N N 77 
8K1 C8  H25 SING N N 78 
8K1 C7  H26 SING N N 79 
8K1 O1  H27 SING N N 80 
8K1 C6  H28 SING N N 81 
8K1 O   H29 SING N N 82 
8K1 C5  H30 SING N N 83 
8K1 C1  H31 SING N N 84 
8K1 C4  H32 SING N N 85 
8K1 N   H33 SING N N 86 
8K1 N   H34 SING N N 87 
8K1 O4  H35 SING N N 88 
8K1 C29 H36 SING N N 89 
8K1 C29 H37 SING N N 90 
8K1 C26 H38 SING N N 91 
8K1 C24 H39 SING N N 92 
8K1 C17 H40 SING N N 93 
8K1 C17 H41 SING N N 94 
8K1 C17 H42 SING N N 95 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8K1 SMILES           ACDLabs              12.01 "C1(C)(CCCC2(C1CC(C34C2C5CC(C3)C(C)(C4)O5)O)C)C(OP(O)(=O)OCC6C(O)C(O)C(O6)n7cnc8c7ncnc8N)=O" 
8K1 InChI            InChI                1.03  
;InChI=1S/C30H42N5O10P/c1-27-5-4-6-28(2,17(27)8-18(36)30-9-14-7-15(22(27)30)44-29(14,3)11-30)26(39)45-46(40,41)42-10-16-20(37)21(38)25(43-16)35-13-34-19-23(31)32-12-33-24(19)35/h12-18,20-22,25,36-38H,4-11H2,1-3H3,(H,40,41)(H2,31,32,33)/t14-,15+,16-,17+,18-,20-,21-,22+,25-,27-,28-,29+,30+/m1/s1
;
8K1 InChIKey         InChI                1.03  FXLLSKDPBMRMHG-INWXLQENSA-N 
8K1 SMILES_CANONICAL CACTVS               3.385 "C[C@]12C[C@]34C[C@H]1C[C@H](O2)[C@H]3[C@]5(C)CCC[C@](C)([C@H]5C[C@H]4O)C(=O)O[P](O)(=O)OC[C@H]6O[C@H]([C@H](O)[C@@H]6O)n7cnc8c(N)ncnc78" 
8K1 SMILES           CACTVS               3.385 "C[C]12C[C]34C[CH]1C[CH](O2)[CH]3[C]5(C)CCC[C](C)([CH]5C[CH]4O)C(=O)O[P](O)(=O)OC[CH]6O[CH]([CH](O)[CH]6O)n7cnc8c(N)ncnc78" 
8K1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@]12CCC[C@@]([C@H]1C[C@H]([C@]34[C@H]2[C@@H]5C[C@H](C3)[C@](C4)(O5)C)O)(C)C(=O)OP(=O)(O)OC[C@@H]6[C@H]([C@H]([C@@H](O6)n7cnc8c7ncnc8N)O)O" 
8K1 SMILES           "OpenEye OEToolkits" 2.0.6 "CC12CCCC(C1CC(C34C2C5CC(C3)C(C4)(O5)C)O)(C)C(=O)OP(=O)(O)OCC6C(C(C(O6)n7cnc8c7ncnc8N)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8K1 "SYSTEMATIC NAME" ACDLabs 12.01 "5'-O-[(R)-hydroxy{[(7beta,8alpha,9beta,10alpha,11beta,13alpha)-7-hydroxy-19-oxo-11,16-epoxykauran-19-yl]oxy}phosphoryl]adenosine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8K1 "Create component" 2017-02-10 RCSB 
8K1 "Initial release"  2017-02-22 RCSB 
# 
