data_611
# 
_chem_comp.id                                    611 
_chem_comp.name                                  "N-[(E)-3-[(2R,3S,4R,5S)-3,4-dihydroxy-5-pyridin-4-ylsulfanyl-oxolan-2-yl]prop-2-enyl]-2,3-dihydroxy-5-nitro-benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H19 N3 O8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-08-24 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        449.434 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     611 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3OE5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
611 C1   C1   C 0  1 N N S 20.464 -30.329 13.322 -2.953 2.700  1.389  C1   611 1  
611 C2   C2   C 0  1 N N R 19.387 -31.433 13.330 -3.842 1.552  1.917  C2   611 2  
611 C3   C3   C 0  1 N N S 18.068 -30.667 13.201 -4.069 0.655  0.680  C3   611 3  
611 O4   O4   O 0  1 N N N 18.423 -29.406 12.616 -2.950 0.933  -0.189 O4   611 4  
611 C5   C5   C 0  1 N N R 19.784 -29.416 12.256 -2.748 2.361  -0.104 C5   611 5  
611 C6   C6   C 0  1 N N N 19.918 -30.003 10.916 -1.350 2.720  -0.536 C6   611 6  
611 S7   S7   S 0  1 N N N 16.950 -31.614 12.158 -4.075 -1.094 1.161  S7   611 7  
611 O8   O8   O 0  1 N N N 20.477 -29.620 14.559 -3.620 3.956  1.530  O8   611 8  
611 O9   O9   O 0  1 N N N 19.380 -32.212 14.533 -5.086 2.063  2.400  O9   611 9  
611 C10  C10  C 0  1 N N N 20.680 -29.442 10.019 -0.583 1.814  -1.093 C10  611 10 
611 C11  C11  C 0  1 Y N N 15.409 -31.140 12.597 -4.491 -1.917 -0.341 C11  611 11 
611 C12  C12  C 0  1 N N N 20.846 -29.974 8.634  0.815  2.174  -1.525 C12  611 12 
611 N13  N13  N 0  1 N N N 21.798 -29.219 7.860  1.770  1.253  -0.903 N13  611 13 
611 C14  C14  C 0  1 N N N 22.614 -29.700 6.904  3.089  1.385  -1.147 C14  611 14 
611 C15  C15  C 0  1 Y N N 23.668 -28.849 6.296  4.051  0.458  -0.520 C15  611 15 
611 C16  C16  C 0  1 Y N N 23.693 -27.440 6.500  5.422  0.591  -0.772 C16  611 16 
611 C17  C17  C 0  1 Y N N 24.767 -26.726 5.902  6.320  -0.289 -0.175 C17  611 17 
611 C18  C18  C 0  1 Y N N 25.743 -27.290 5.130  5.856  -1.289 0.663  C18  611 18 
611 C19  C19  C 0  1 Y N N 25.693 -28.692 4.965  4.499  -1.420 0.911  C19  611 19 
611 C20  C20  C 0  1 Y N N 24.662 -29.466 5.541  3.599  -0.554 0.332  C20  611 20 
611 N21  N21  N 1  1 N N N 26.693 -29.360 4.162  4.015  -2.494 1.808  N21  611 21 
611 O22  O22  O 0  1 N N N 22.782 -26.746 7.191  5.872  1.572  -1.594 O22  611 22 
611 O23  O23  O 0  1 N N N 24.812 -25.357 6.088  7.653  -0.167 -0.414 O23  611 23 
611 O24  O24  O 0  1 N N N 22.504 -30.901 6.519  3.486  2.266  -1.884 O24  611 24 
611 O25  O25  O 0  1 N N N 27.496 -28.742 3.514  4.809  -3.259 2.326  O25  611 25 
611 O26  O26  O -1 1 N N N 26.658 -30.582 4.153  2.823  -2.612 2.029  O26  611 26 
611 C27  C27  C 0  1 Y N N 14.235 -31.884 12.159 -4.598 -3.308 -0.389 C27  611 27 
611 C28  C28  C 0  1 Y N N 12.955 -31.486 12.564 -4.925 -3.913 -1.584 C28  611 28 
611 N29  N29  N 0  1 Y N N 12.699 -30.395 13.361 -5.135 -3.194 -2.672 N29  611 29 
611 C30  C30  C 0  1 Y N N 13.814 -29.677 13.773 -5.043 -1.877 -2.667 C30  611 30 
611 C31  C31  C 0  1 Y N N 15.119 -30.017 13.429 -4.726 -1.195 -1.511 C31  611 31 
611 H1   H1   H 0  1 N N N 21.497 -30.666 13.148 -1.997 2.714  1.912  H1   611 32 
611 H2   H2   H 0  1 N N N 19.568 -32.157 12.522 -3.326 0.998  2.701  H2   611 33 
611 H3   H3   H 0  1 N N N 17.551 -30.510 14.159 -5.006 0.917  0.188  H3   611 34 
611 H5   H5   H 0  1 N N N 20.235 -28.413 12.228 -3.482 2.885  -0.716 H5   611 35 
611 H6   H6   H 0  1 N N N 19.381 -30.907 10.672 -0.979 3.723  -0.388 H6   611 36 
611 HO8  HO8  H 0  1 N N N 21.146 -28.946 14.531 -3.828 4.190  2.445  HO8  611 37 
611 HO9  HO9  H 0  1 N N N 18.699 -32.872 14.479 -5.683 1.385  2.743  HO9  611 38 
611 H10  H10  H 0  1 N N N 21.219 -28.547 10.292 -0.954 0.811  -1.241 H10  611 39 
611 H12  H12  H 0  1 N N N 21.199 -31.014 8.701  0.891  2.097  -2.610 H12  611 40 
611 H12A H12A H 0  0 N N N 19.872 -29.930 8.126  1.040  3.194  -1.217 H12A 611 41 
611 HN13 HN13 H 0  0 N N N 21.859 -28.240 8.052  1.453  0.550  -0.315 HN13 611 42 
611 H18  H18  H 0  1 N N N 26.515 -26.693 4.668  6.555  -1.971 1.124  H18  611 43 
611 H20  H20  H 0  1 N N N 24.644 -30.536 5.396  2.543  -0.658 0.534  H20  611 44 
611 HO22 HO22 H 0  0 N N N 23.014 -25.825 7.186  6.077  2.402  -1.140 HO22 611 45 
611 HO23 HO23 H 0  0 N N N 25.571 -25.001 5.642  8.113  0.413  0.208  HO23 611 46 
611 H27  H27  H 0  1 N N N 14.353 -32.746 11.519 -4.428 -3.901 0.497  H27  611 47 
611 H28  H28  H 0  1 N N N 12.114 -32.074 12.228 -5.011 -4.988 -1.631 H28  611 48 
611 H30  H30  H 0  1 N N N 13.660 -28.807 14.394 -5.222 -1.327 -3.579 H30  611 49 
611 H31  H31  H 0  1 N N N 15.934 -29.415 13.802 -4.657 -0.117 -1.513 H31  611 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
611 C1  C2   SING N N 1  
611 C1  C5   SING N N 2  
611 C1  O8   SING N N 3  
611 C2  C3   SING N N 4  
611 C2  O9   SING N N 5  
611 C3  O4   SING N N 6  
611 C3  S7   SING N N 7  
611 O4  C5   SING N N 8  
611 C5  C6   SING N N 9  
611 C6  C10  DOUB N N 10 
611 S7  C11  SING N N 11 
611 C10 C12  SING N N 12 
611 C11 C27  DOUB Y N 13 
611 C11 C31  SING Y E 14 
611 C12 N13  SING N N 15 
611 N13 C14  SING N N 16 
611 C14 C15  SING N N 17 
611 C14 O24  DOUB N N 18 
611 C15 C16  DOUB Y N 19 
611 C15 C20  SING Y N 20 
611 C16 C17  SING Y N 21 
611 C16 O22  SING N N 22 
611 C17 C18  DOUB Y N 23 
611 C17 O23  SING N N 24 
611 C18 C19  SING Y N 25 
611 C19 C20  DOUB Y N 26 
611 C19 N21  SING N N 27 
611 N21 O25  DOUB N N 28 
611 N21 O26  SING N N 29 
611 C27 C28  SING Y N 30 
611 C28 N29  DOUB Y N 31 
611 N29 C30  SING Y N 32 
611 C30 C31  DOUB Y N 33 
611 C1  H1   SING N N 34 
611 C2  H2   SING N N 35 
611 C3  H3   SING N N 36 
611 C5  H5   SING N N 37 
611 C6  H6   SING N N 38 
611 O8  HO8  SING N N 39 
611 O9  HO9  SING N N 40 
611 C10 H10  SING N N 41 
611 C12 H12  SING N N 42 
611 C12 H12A SING N N 43 
611 N13 HN13 SING N N 44 
611 C18 H18  SING N N 45 
611 C20 H20  SING N N 46 
611 O22 HO22 SING N N 47 
611 O23 HO23 SING N N 48 
611 C27 H27  SING N N 49 
611 C28 H28  SING N N 50 
611 C30 H30  SING N N 51 
611 C31 H31  SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
611 SMILES           ACDLabs              12.01 "[O-][N+](=O)c1cc(c(O)c(O)c1)C(=O)NC/C=C/C3OC(Sc2ccncc2)C(O)C3O"                                                                                                                            
611 SMILES_CANONICAL CACTVS               3.370 "O[C@@H]1[C@H](O)[C@H](O[C@H]1Sc2ccncc2)\C=C\CNC(=O)c3cc(cc(O)c3O)[N+]([O-])=O"                                                                                                             
611 SMILES           CACTVS               3.370 "O[CH]1[CH](O)[CH](O[CH]1Sc2ccncc2)C=CCNC(=O)c3cc(cc(O)c3O)[N+]([O-])=O"                                                                                                                    
611 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cnccc1S[C@H]2[C@@H]([C@@H]([C@H](O2)/C=C/CNC(=O)c3cc(cc(c3O)O)[N+](=O)[O-])O)O"                                                                                                          
611 SMILES           "OpenEye OEToolkits" 1.7.0 "c1cnccc1SC2C(C(C(O2)C=CCNC(=O)c3cc(cc(c3O)O)[N+](=O)[O-])O)O"                                                                                                                              
611 InChI            InChI                1.03  "InChI=1S/C19H19N3O8S/c23-13-9-10(22(28)29)8-12(15(13)24)18(27)21-5-1-2-14-16(25)17(26)19(30-14)31-11-3-6-20-7-4-11/h1-4,6-9,14,16-17,19,23-26H,5H2,(H,21,27)/b2-1+/t14-,16-,17-,19+/m1/s1" 
611 InChIKey         InChI                1.03  XRZIENNFYKGKSZ-GXSCOFJOSA-N                                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
611 "SYSTEMATIC NAME" ACDLabs              12.01 "pyridin-4-yl (5E)-5,6,7-trideoxy-7-[(2,3-dihydroxy-5-nitrobenzoyl)amino]-1-thio-beta-D-ribo-hept-5-enofuranoside"      
611 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "N-[(E)-3-[(2R,3S,4R,5S)-3,4-dihydroxy-5-pyridin-4-ylsulfanyl-oxolan-2-yl]prop-2-enyl]-2,3-dihydroxy-5-nitro-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
611 "Create component"     2010-08-24 PDBJ 
611 "Modify aromatic_flag" 2011-06-04 RCSB 
611 "Modify descriptor"    2011-06-04 RCSB 
# 
