data_4R1
#

_chem_comp.id                                   4R1
_chem_comp.name                                 2-amino-2-deoxy-6-O-phosphono-beta-D-glucopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H14 N O8 P"
_chem_comp.mon_nstd_parent_comp_id              GCS
_chem_comp.pdbx_synonyms                        
;beta-glucosamine-6-phosphate; 6-O-phosphono-beta-D-glucosamine; 2-amino-2-deoxy-6-O-phosphono-beta-D-glucose;
2-amino-2-deoxy-6-O-phosphono-D-glucose; 2-amino-2-deoxy-6-O-phosphono-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-05-13
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       259.151
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4R1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4ZSI
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  4R1  beta-glucosamine-6-phosphate                  PDB  ?  
2  4R1  6-O-phosphono-beta-D-glucosamine              PDB  ?  
3  4R1  2-amino-2-deoxy-6-O-phosphono-beta-D-glucose  PDB  ?  
4  4R1  2-amino-2-deoxy-6-O-phosphono-D-glucose       PDB  ?  
5  4R1  2-amino-2-deoxy-6-O-phosphono-glucose         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4R1  C2    C2   C  0  1  N  N  R  -4.105  15.753  27.994  -3.202   0.562  -0.230  C2    4R1   1  
4R1  C4    C4   C  0  1  N  N  S  -2.770  15.872  30.113  -1.535  -1.294  -0.241  C4    4R1   2  
4R1  C5    C5   C  0  1  N  N  R  -1.876  16.846  29.370  -0.497  -0.301   0.288  C5    4R1   3  
4R1  C6    C6   C  0  1  N  N  N  -0.450  16.777  29.865   0.889  -0.683  -0.236  C6    4R1   4  
4R1  O1    O1   O  0  1  N  Y  N  -3.058  16.713  25.988  -2.319   2.812  -0.180  O1    4R1   5  
4R1  OAF   OAF  O  0  1  N  N  N   1.177  19.369  30.562   4.264   1.081   0.953  OAF   4R1   6  
4R1  PAP   PAP  P  0  1  N  N  N   1.646  18.353  29.549   3.444   0.054   0.023  PAP   4R1   7  
4R1  OAG   OAG  O  0  1  N  N  N   2.452  17.216  30.152   3.699   0.411  -1.526  OAG   4R1   8  
4R1  OAB   OAB  O  0  1  N  N  N   2.241  18.944  28.291   3.901  -1.328   0.292  OAB   4R1   9  
4R1  O6    O6   O  0  1  N  N  N   0.297  17.665  29.026   1.872   0.172   0.350  O6    4R1  10  
4R1  O5    O5   O  0  1  N  N  N  -1.858  16.501  27.984  -0.829   1.015  -0.158  O5    4R1  11  
4R1  C1    C1   C  0  1  N  N  R  -3.138  16.776  27.420  -2.099   1.483   0.299  C1    4R1  12  
4R1  N2    N2   N  0  1  N  N  N  -5.407  15.910  27.359  -4.504   1.005   0.286  N2    4R1  13  
4R1  C3    C3   C  0  1  N  N  R  -4.181  15.923  29.513  -2.927  -0.871   0.238  C3    4R1  14  
4R1  O3    O3   O  0  1  N  N  N  -4.966  14.879  30.088  -3.910  -1.750  -0.312  O3    4R1  15  
4R1  O4    O4   O  0  1  N  N  N  -2.744  16.183  31.521  -1.238  -2.603   0.251  O4    4R1  16  
4R1  H2    H1   H  0  1  N  N  N  -3.715  14.747  27.778  -3.211   0.593  -1.319  H2    4R1  17  
4R1  H4    H2   H  0  1  N  N  N  -2.373  14.857  29.960  -1.511  -1.301  -1.331  H4    4R1  18  
4R1  H5    H3   H  0  1  N  N  N  -2.260  17.868  29.507  -0.493  -0.326   1.378  H5    4R1  19  
4R1  H61   H4   H  0  1  N  N  N  -0.063  15.751  29.777   1.104  -1.719   0.028  H61   4R1  20  
4R1  H62   H5   H  0  1  N  N  N  -0.392  17.102  30.914   0.910  -0.573  -1.320  H62   4R1  21  
4R1  HO1   H6   H  0  1  N  Y  N  -3.912  16.897  25.614  -1.656   3.451   0.116  HO1   4R1  22  
4R1  H7    H7   H  0  1  N  N  N   1.338  20.245  30.231   5.220   1.063   0.809  H7    4R1  23  
4R1  H8    H8   H  0  1  N  N  N   3.224  17.058  29.621   3.422   1.304  -1.774  H8    4R1  24  
4R1  H1    H9   H  0  1  N  N  N  -3.470  17.779  27.726  -2.117   1.482   1.389  H1    4R1  25  
4R1  HN21  H10  H  0  0  N  N  N  -6.045  15.238  27.735  -4.707   1.948  -0.010  HN21  4R1  26  
4R1  HN22  H11  H  0  0  N  Y  N  -5.753  16.832  27.533  -5.238   0.372   0.007  HN22  4R1  27  
4R1  H3    H13  H  0  1  N  N  N  -4.627  16.903  29.739  -2.967  -0.913   1.326  H3    4R1  28  
4R1  HO3   H14  H  0  1  N  Y  N  -5.006  14.995  31.030  -4.817  -1.536  -0.054  HO3   4R1  29  
4R1  HO4   H15  H  0  1  N  Y  N  -3.303  15.575  31.990  -1.858  -3.284  -0.043  HO4   4R1  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4R1  O1   C1    SING  N  N   1  
4R1  N2   C2    SING  N  N   2  
4R1  C1   O5    SING  N  N   3  
4R1  C1   C2    SING  N  N   4  
4R1  O5   C5    SING  N  N   5  
4R1  C2   C3    SING  N  N   6  
4R1  OAB  PAP   DOUB  N  N   7  
4R1  O6   PAP   SING  N  N   8  
4R1  O6   C6    SING  N  N   9  
4R1  C5   C6    SING  N  N  10  
4R1  C5   C4    SING  N  N  11  
4R1  C3   O3    SING  N  N  12  
4R1  C3   C4    SING  N  N  13  
4R1  PAP  OAG   SING  N  N  14  
4R1  PAP  OAF   SING  N  N  15  
4R1  C4   O4    SING  N  N  16  
4R1  C2   H2    SING  N  N  17  
4R1  C4   H4    SING  N  N  18  
4R1  C5   H5    SING  N  N  19  
4R1  C6   H61   SING  N  N  20  
4R1  C6   H62   SING  N  N  21  
4R1  O1   HO1   SING  N  N  22  
4R1  OAF  H7    SING  N  N  23  
4R1  OAG  H8    SING  N  N  24  
4R1  C1   H1    SING  N  N  25  
4R1  N2   HN21  SING  N  N  26  
4R1  N2   HN22  SING  N  N  27  
4R1  C3   H3    SING  N  N  28  
4R1  O3   HO3   SING  N  N  29  
4R1  O4   HO4   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4R1  SMILES            ACDLabs               12.01  "C1(C(C(O)C(COP(O)(O)=O)OC1O)O)N"  
4R1  InChI             InChI                 1.03   "InChI=1S/C6H14NO8P/c7-3-5(9)4(8)2(15-6(3)10)1-14-16(11,12)13/h2-6,8-10H,1,7H2,(H2,11,12,13)/t2-,3-,4-,5-,6-/m1/s1"  
4R1  InChIKey          InChI                 1.03   XHMJOUIAFHJHBW-QZABAPFNSA-N  
4R1  SMILES_CANONICAL  CACTVS                3.385  "N[C@H]1[C@H](O)O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]1O"  
4R1  SMILES            CACTVS                3.385  "N[CH]1[CH](O)O[CH](CO[P](O)(O)=O)[CH](O)[CH]1O"  
4R1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)N)O)O)OP(=O)(O)O"  
4R1  SMILES            "OpenEye OEToolkits"  1.9.2  "C(C1C(C(C(C(O1)O)N)O)O)OP(=O)(O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4R1  "SYSTEMATIC NAME"            ACDLabs               12.01  2-amino-2-deoxy-6-O-phosphono-beta-D-glucopyranose  
4R1  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.9.2  "[(2R,3S,4R,5R,6R)-5-azanyl-3,4,6-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate"  
4R1  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    b-D-GlcpN6PO3  
#
_pdbx_chem_comp_related.comp_id            4R1
_pdbx_chem_comp_related.related_comp_id    GCS
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  4R1  C1    GCS  C1    "Carbohydrate core"  
 2  4R1  C2    GCS  C2    "Carbohydrate core"  
 3  4R1  C3    GCS  C3    "Carbohydrate core"  
 4  4R1  C4    GCS  C4    "Carbohydrate core"  
 5  4R1  C5    GCS  C5    "Carbohydrate core"  
 6  4R1  C6    GCS  C6    "Carbohydrate core"  
 7  4R1  N2    GCS  N2    "Carbohydrate core"  
 8  4R1  O1    GCS  O1    "Carbohydrate core"  
 9  4R1  O3    GCS  O3    "Carbohydrate core"  
10  4R1  O4    GCS  O4    "Carbohydrate core"  
11  4R1  O5    GCS  O5    "Carbohydrate core"  
12  4R1  O6    GCS  O6    "Carbohydrate core"  
13  4R1  H2    GCS  H2    "Carbohydrate core"  
14  4R1  HN21  GCS  HN21  "Carbohydrate core"  
15  4R1  HN22  GCS  HN22  "Carbohydrate core"  
16  4R1  H3    GCS  H3    "Carbohydrate core"  
17  4R1  HO3   GCS  HO3   "Carbohydrate core"  
18  4R1  HO4   GCS  HO4   "Carbohydrate core"  
19  4R1  H4    GCS  H4    "Carbohydrate core"  
20  4R1  H5    GCS  H5    "Carbohydrate core"  
21  4R1  H61   GCS  H61   "Carbohydrate core"  
22  4R1  H62   GCS  H62   "Carbohydrate core"  
23  4R1  HO1   GCS  HO1   "Carbohydrate core"  
24  4R1  H1    GCS  H1    "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
4R1  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
4R1  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
4R1  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
4R1  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4R1  "Create component"          2015-05-13  EBI   
4R1  "Initial release"           2016-06-08  RCSB  
4R1  "Other modification"        2020-07-03  RCSB  
4R1  "Modify parent residue"     2020-07-17  RCSB  
4R1  "Modify name"               2020-07-17  RCSB  
4R1  "Modify synonyms"           2020-07-17  RCSB  
4R1  "Modify internal type"      2020-07-17  RCSB  
4R1  "Modify linking type"       2020-07-17  RCSB  
4R1  "Modify atom id"            2020-07-17  RCSB  
4R1  "Modify component atom id"  2020-07-17  RCSB  
4R1  "Modify leaving atom flag"  2020-07-17  RCSB  
##
