data_4J1
#

_chem_comp.id                                   4J1
_chem_comp.name                                 "(2R,3R,4S,5S,6R)-2-[4-[1-[4-[6-[(Z)-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]butyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H33 N5 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-07-02
_chem_comp.pdbx_modified_date                   2022-06-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       495.526
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4J1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7P1N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4J1  C02  C1   C  0  1  N  N  N  -122.944  49.245  -40.112    8.081  -3.093   0.637  C02  4J1   1  
4J1  C03  C2   C  0  1  N  N  R  -122.679  47.935  -39.452    8.244  -1.733  -0.046  C03  4J1   2  
4J1  C05  C3   C  0  1  N  N  R  -121.645  45.762  -39.738    7.229   0.431  -0.238  C05  4J1   3  
4J1  C10  C4   C  0  1  N  N  N  -119.648  40.527  -39.014    1.266   1.959   0.450  C10  4J1   4  
4J1  C14  C5   C  0  1  N  N  N  -119.841  36.901  -42.469   -3.427   0.208   0.421  C14  4J1   5  
4J1  C07  C6   C  0  1  N  N  N  -121.377  43.582  -40.500    4.847   0.697  -0.193  C07  4J1   6  
4J1  C08  C7   C  0  1  N  N  N  -120.149  42.797  -40.049    3.737   1.600   0.349  C08  4J1   7  
4J1  C09  C8   C  0  1  N  N  N  -120.488  41.805  -38.940    2.376   1.056  -0.092  C09  4J1   8  
4J1  C12  C9   C  0  1  Y  N  N  -119.540  38.452  -40.590   -1.118   1.108   0.818  C12  4J1   9  
4J1  C15  C10  C  0  1  N  N  N  -119.373  37.188  -43.896   -4.501   1.003  -0.325  C15  4J1  10  
4J1  C16  C11  C  0  1  N  N  N  -120.541  37.516  -44.835   -5.886   0.526   0.115  C16  4J1  11  
4J1  O01  O1   O  0  1  N  N  N  -124.214  49.694  -39.717    6.881  -3.717   0.176  O01  4J1  12  
4J1  C11  C12  C  0  1  Y  N  N  -119.983  39.738  -40.281   -0.074   1.423   0.016  C11  4J1  13  
4J1  C17  C13  C  0  1  N  N  N  -120.687  36.470  -45.942   -6.960   1.321  -0.632  C17  4J1  14  
4J1  C18  C14  C  0  1  Y  N  N  -121.318  35.186  -45.404   -8.325   0.851  -0.198  C18  4J1  15  
4J1  C20  C15  C  0  1  Y  N  N  -121.929  32.985  -45.753   -9.822  -0.886   0.073  C20  4J1  16  
4J1  C21  C16  C  0  1  N  N  N  -121.991  31.796  -46.709  -10.120  -2.325  -0.049  C21  4J1  17  
4J1  C24  C17  C  0  1  Y  N  N  -122.439  32.876  -44.461  -10.793  -0.014   0.582  C24  4J1  18  
4J1  C26  C18  C  0  1  Y  N  N  -122.367  33.979  -43.614  -10.493   1.339   0.690  C26  4J1  19  
4J1  C27  C19  C  0  1  Y  N  N  -121.800  35.149  -44.103   -9.238   1.770   0.291  C27  4J1  20  
4J1  C30  C20  C  0  1  N  N  R  -120.781  45.964  -38.486    8.533   1.131   0.152  C30  4J1  21  
4J1  C32  C21  C  0  1  N  N  S  -121.388  46.928  -37.522    9.719   0.266  -0.287  C32  4J1  22  
4J1  C34  C22  C  0  1  N  N  S  -121.927  48.166  -38.139    9.589  -1.120   0.352  C34  4J1  23  
4J1  N13  N1   N  0  1  Y  N  N  -120.052  38.150  -41.765   -2.101   0.664  -0.000  N13  4J1  24  
4J1  N19  N2   N  0  1  Y  N  N  -121.397  34.120  -46.176   -8.632  -0.424  -0.296  N19  4J1  25  
4J1  N22  N3   N  0  1  N  N  N  -122.703  31.916  -47.725   -9.226  -3.134  -0.519  N22  4J1  26  
4J1  N28  N4   N  0  1  Y  N  N  -120.796  39.185  -42.232   -1.668   0.711  -1.212  N28  4J1  27  
4J1  N29  N5   N  0  1  Y  N  N  -120.745  40.179  -41.294   -0.465   1.164  -1.236  N29  4J1  28  
4J1  O04  O2   O  0  1  N  N  N  -121.924  47.047  -40.383    7.186  -0.864   0.364  O04  4J1  29  
4J1  O06  O3   O  0  1  N  N  N  -121.001  44.926  -40.620    6.117   1.206   0.218  O06  4J1  30  
4J1  O23  O4   O  0  1  N  N  N  -123.398  33.123  -47.932   -7.961  -2.636  -0.917  O23  4J1  31  
4J1  O25  O5   O  0  1  N  N  N  -123.018  31.672  -44.012  -12.008  -0.484   0.965  O25  4J1  32  
4J1  O31  O6   O  0  1  N  N  N  -120.604  44.700  -37.830    8.605   2.403  -0.495  O31  4J1  33  
4J1  O33  O7   O  0  1  N  N  N  -120.359  47.303  -36.548   10.939   0.876   0.138  O33  4J1  34  
4J1  O35  O8   O  0  1  N  N  N  -122.844  48.783  -37.209   10.651  -1.959  -0.108  O35  4J1  35  
4J1  H1   H1   H  0  1  N  N  N  -122.917  49.122  -41.205    8.935  -3.725   0.395  H1   4J1  36  
4J1  H2   H2   H  0  1  N  N  N  -122.181  49.976  -39.806    8.026  -2.953   1.716  H2   4J1  37  
4J1  H3   H3   H  0  1  N  N  N  -123.642  47.459  -39.216    8.209  -1.863  -1.128  H3   4J1  38  
4J1  H4   H4   H  0  1  N  N  N  -122.597  45.312  -39.421    7.181   0.330  -1.322  H4   4J1  39  
4J1  H5   H5   H  0  1  N  N  N  -119.859  39.903  -38.133    1.314   1.979   1.539  H5   4J1  40  
4J1  H6   H6   H  0  1  N  N  N  -118.581  40.795  -39.026    1.397   2.968   0.061  H6   4J1  41  
4J1  H7   H7   H  0  1  N  N  N  -120.784  36.335  -42.500   -3.541   0.362   1.494  H7   4J1  42  
4J1  H8   H8   H  0  1  N  N  N  -119.075  36.310  -41.945   -3.536  -0.853   0.193  H8   4J1  43  
4J1  H9   H9   H  0  1  N  N  N  -122.180  43.482  -39.755    4.716  -0.313   0.196  H9   4J1  44  
4J1  H10  H10  H  0  1  N  N  N  -121.729  43.203  -41.471    4.799   0.676  -1.282  H10  4J1  45  
4J1  H11  H11  H  0  1  N  N  N  -119.743  42.245  -40.909    3.785   1.621   1.438  H11  4J1  46  
4J1  H12  H12  H  0  1  N  N  N  -119.392  43.503  -39.677    3.867   2.610  -0.040  H12  4J1  47  
4J1  H13  H13  H  0  1  N  N  N  -120.309  42.288  -37.968    2.246   0.046   0.297  H13  4J1  48  
4J1  H14  H14  H  0  1  N  N  N  -121.551  41.533  -39.024    2.329   1.035  -1.180  H14  4J1  49  
4J1  H15  H15  H  0  1  N  N  N  -118.902  37.826  -39.984   -1.158   1.191   1.894  H15  4J1  50  
4J1  H16  H16  H  0  1  N  N  N  -118.847  36.302  -44.281   -4.392   2.063  -0.097  H16  4J1  51  
4J1  H17  H17  H  0  1  N  N  N  -118.683  38.044  -43.877   -4.387   0.848  -1.398  H17  4J1  52  
4J1  H18  H18  H  0  1  N  N  N  -120.364  38.499  -45.295   -5.995  -0.534  -0.113  H18  4J1  53  
4J1  H19  H19  H  0  1  N  N  N  -121.472  37.548  -44.249   -6.000   0.681   1.188  H19  4J1  54  
4J1  H20  H20  H  0  1  N  N  N  -124.398  50.529  -40.130    6.713  -4.584   0.568  H20  4J1  55  
4J1  H21  H21  H  0  1  N  N  N  -119.692  36.238  -46.351   -6.851   2.381  -0.404  H21  4J1  56  
4J1  H22  H22  H  0  1  N  N  N  -121.325  36.877  -46.740   -6.846   1.166  -1.705  H22  4J1  57  
4J1  H23  H23  H  0  1  N  N  N  -121.440  30.888  -46.513  -11.085  -2.704   0.254  H23  4J1  58  
4J1  H24  H24  H  0  1  N  N  N  -122.742  33.926  -42.603  -11.219   2.037   1.078  H24  4J1  59  
4J1  H25  H25  H  0  1  N  N  N  -121.735  36.025  -43.474   -8.973   2.815   0.362  H25  4J1  60  
4J1  H26  H26  H  0  1  N  N  N  -119.802  46.352  -38.804    8.563   1.270   1.233  H26  4J1  61  
4J1  H27  H27  H  0  1  N  N  N  -122.206  46.419  -36.992    9.718   0.170  -1.373  H27  4J1  62  
4J1  H28  H28  H  0  1  N  N  N  -121.093  48.855  -38.338    9.641  -1.028   1.437  H28  4J1  63  
4J1  H29  H29  H  0  1  N  N  N  -123.895  33.068  -48.740   -7.360  -3.315  -1.255  H29  4J1  64  
4J1  H30  H30  H  0  1  N  N  N  -123.310  31.776  -43.114  -12.051  -0.753   1.893  H30  4J1  65  
4J1  H31  H31  H  0  1  N  N  N  -120.070  44.818  -37.053    7.881   3.002  -0.266  H31  4J1  66  
4J1  H32  H32  H  0  1  N  N  N  -120.724  47.918  -35.922   11.083   1.761  -0.224  H32  4J1  67  
4J1  H33  H33  H  0  1  N  N  N  -122.401  48.938  -36.383   11.534  -1.631   0.110  H33  4J1  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4J1  O23  N22  SING  N  N   1  
4J1  N22  C21  DOUB  N  Z   2  
4J1  C21  C20  SING  N  N   3  
4J1  N19  C20  DOUB  Y  N   4  
4J1  N19  C18  SING  Y  N   5  
4J1  C17  C18  SING  N  N   6  
4J1  C17  C16  SING  N  N   7  
4J1  C20  C24  SING  Y  N   8  
4J1  C18  C27  DOUB  Y  N   9  
4J1  C16  C15  SING  N  N  10  
4J1  C24  O25  SING  N  N  11  
4J1  C24  C26  DOUB  Y  N  12  
4J1  C27  C26  SING  Y  N  13  
4J1  C15  C14  SING  N  N  14  
4J1  C14  N13  SING  N  N  15  
4J1  N28  N13  SING  Y  N  16  
4J1  N28  N29  DOUB  Y  N  17  
4J1  N13  C12  SING  Y  N  18  
4J1  N29  C11  SING  Y  N  19  
4J1  O06  C07  SING  N  N  20  
4J1  O06  C05  SING  N  N  21  
4J1  C12  C11  DOUB  Y  N  22  
4J1  C07  C08  SING  N  N  23  
4J1  O04  C05  SING  N  N  24  
4J1  O04  C03  SING  N  N  25  
4J1  C11  C10  SING  N  N  26  
4J1  C02  O01  SING  N  N  27  
4J1  C02  C03  SING  N  N  28  
4J1  C08  C09  SING  N  N  29  
4J1  C05  C30  SING  N  N  30  
4J1  C03  C34  SING  N  N  31  
4J1  C10  C09  SING  N  N  32  
4J1  C30  O31  SING  N  N  33  
4J1  C30  C32  SING  N  N  34  
4J1  C34  C32  SING  N  N  35  
4J1  C34  O35  SING  N  N  36  
4J1  C32  O33  SING  N  N  37  
4J1  C02  H1   SING  N  N  38  
4J1  C02  H2   SING  N  N  39  
4J1  C03  H3   SING  N  N  40  
4J1  C05  H4   SING  N  N  41  
4J1  C10  H5   SING  N  N  42  
4J1  C10  H6   SING  N  N  43  
4J1  C14  H7   SING  N  N  44  
4J1  C14  H8   SING  N  N  45  
4J1  C07  H9   SING  N  N  46  
4J1  C07  H10  SING  N  N  47  
4J1  C08  H11  SING  N  N  48  
4J1  C08  H12  SING  N  N  49  
4J1  C09  H13  SING  N  N  50  
4J1  C09  H14  SING  N  N  51  
4J1  C12  H15  SING  N  N  52  
4J1  C15  H16  SING  N  N  53  
4J1  C15  H17  SING  N  N  54  
4J1  C16  H18  SING  N  N  55  
4J1  C16  H19  SING  N  N  56  
4J1  O01  H20  SING  N  N  57  
4J1  C17  H21  SING  N  N  58  
4J1  C17  H22  SING  N  N  59  
4J1  C21  H23  SING  N  N  60  
4J1  C26  H24  SING  N  N  61  
4J1  C27  H25  SING  N  N  62  
4J1  C30  H26  SING  N  N  63  
4J1  C32  H27  SING  N  N  64  
4J1  C34  H28  SING  N  N  65  
4J1  O23  H29  SING  N  N  66  
4J1  O25  H30  SING  N  N  67  
4J1  O31  H31  SING  N  N  68  
4J1  O33  H32  SING  N  N  69  
4J1  O35  H33  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4J1  InChI             InChI                 1.03   "InChI=1S/C22H33N5O8/c28-13-18-19(30)20(31)21(32)22(35-18)34-10-4-2-6-15-12-27(26-25-15)9-3-1-5-14-7-8-17(29)16(24-14)11-23-33/h7-8,11-12,18-22,28-33H,1-6,9-10,13H2/b23-11-/t18-,19-,20+,21-,22-/m1/s1"  
4J1  InChIKey          InChI                 1.03   CPMPZKJNKKACAD-PVOZXIKOSA-N  
4J1  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](OCCCCc2cn(CCCCc3ccc(O)c(\C=N/O)n3)nn2)[C@H](O)[C@@H](O)[C@@H]1O"  
4J1  SMILES            CACTVS                3.385  "OC[CH]1O[CH](OCCCCc2cn(CCCCc3ccc(O)c(C=NO)n3)nn2)[CH](O)[CH](O)[CH]1O"  
4J1  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(nc1CCCCn2cc(nn2)CCCCO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)/C=N\O)O"  
4J1  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(nc1CCCCn2cc(nn2)CCCCOC3C(C(C(C(O3)CO)O)O)O)C=NO)O"  
#
_pdbx_chem_comp_identifier.comp_id          4J1
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[4-[1-[4-[6-[(~{Z})-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]butyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4J1  "Create component"  2021-07-02  PDBE  
4J1  "Initial release"   2022-06-08  RCSB  
##
