data_1T1
# 
_chem_comp.id                                    1T1 
_chem_comp.name                                  "stearoyl adenylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H48 N5 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "5'-O-[(R)-hydroxy(octadecanoyloxy)phosphoryl]adenosine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-06-25 
_chem_comp.pdbx_modified_date                    2022-07-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        613.683 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1T1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7R7F 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1T1 C15 C1  C 0 1 N N N -26.086 29.591 18.564 -0.722  -0.669 -0.440 C15 1T1 1  
1T1 C17 C2  C 0 1 N N N -25.128 29.501 20.858 -3.204  -0.380 -0.445 C17 1T1 2  
1T1 C20 C3  C 0 1 N N N -25.275 26.997 22.855 -6.988  -0.462 0.261  C20 1T1 3  
1T1 C21 C4  C 0 1 N N N -24.667 25.971 23.796 -8.167  0.200  -0.455 C21 1T1 4  
1T1 C22 C5  C 0 1 N N N -25.534 24.729 23.886 -9.469  -0.172 0.256  C22 1T1 5  
1T1 C24 C6  C 0 1 N N N -24.498 22.444 24.267 -11.951 0.117  0.250  C24 1T1 6  
1T1 C26 C7  C 0 1 N N N -24.769 20.005 24.829 -14.433 0.407  0.245  C26 1T1 7  
1T1 C28 C8  C 0 1 N N N -25.096 17.811 25.969 -16.914 0.697  0.240  C28 1T1 8  
1T1 C02 C9  C 0 1 Y N N -28.584 34.937 23.288 10.893  3.828  0.310  C02 1T1 9  
1T1 C03 C10 C 0 1 Y N N -28.155 34.600 22.000 9.835   2.910  0.422  C03 1T1 10 
1T1 C04 C11 C 0 1 Y N N -28.447 35.467 20.981 9.842   1.784  -0.419 C04 1T1 11 
1T1 C06 C12 C 0 1 N N R -28.031 35.549 18.578 8.285   -0.189 -0.717 C06 1T1 12 
1T1 C08 C13 C 0 1 N N R -26.554 35.045 16.675 6.623   -1.801 -0.674 C08 1T1 13 
1T1 C09 C14 C 0 1 N N N -25.689 33.941 16.100 5.497   -2.237 0.267  C09 1T1 14 
1T1 C14 C15 C 0 1 N N N -26.243 30.690 17.534 0.439   -1.321 0.266  C14 1T1 15 
1T1 C16 C16 C 0 1 N N N -26.195 30.128 19.981 -2.025  -1.042 0.271  C16 1T1 16 
1T1 C18 C17 C 0 1 N N N -25.516 29.434 22.325 -4.506  -0.752 0.266  C18 1T1 17 
1T1 C19 C18 C 0 1 N N N -24.676 28.386 23.034 -5.685  -0.090 -0.450 C19 1T1 18 
1T1 C23 C19 C 0 1 N N N -24.867 23.520 23.254 -10.648 0.490  -0.460 C23 1T1 19 
1T1 C25 C20 C 0 1 N N N -25.430 21.235 24.222 -13.130 0.780  -0.465 C25 1T1 20 
1T1 C27 C21 C 0 1 N N N -25.668 18.781 24.942 -15.612 1.069  -0.471 C27 1T1 21 
1T1 C29 C22 C 0 1 N N N -25.630 16.389 25.848 -18.093 1.359  -0.476 C29 1T1 22 
1T1 C30 C23 C 0 1 N N N -24.882 15.422 26.761 -19.396 0.987  0.235  C30 1T1 23 
1T1 C31 C24 C 0 1 N N N -25.638 14.118 26.959 -20.575 1.649  -0.481 C31 1T1 24 
1T1 C34 C25 C 0 1 N N S -25.870 35.606 17.628 7.931   -2.537 -0.307 C34 1T1 25 
1T1 C36 C26 C 0 1 N N R -27.044 36.408 18.483 8.931   -1.398 0.008  C36 1T1 26 
1T1 C38 C27 C 0 1 Y N N -27.360 33.793 20.187 8.066   1.746  0.887  C38 1T1 27 
1T1 C41 C28 C 0 1 Y N N -29.506 36.863 22.460 11.809  2.516  -1.355 C41 1T1 28 
1T1 N01 N1  N 0 1 N N N -28.323 34.088 24.417 10.944  4.951  1.115  N01 1T1 29 
1T1 N05 N2  N 0 1 Y N N -27.949 34.929 19.879 8.714   1.070  -0.103 N05 1T1 30 
1T1 N39 N3  N 0 1 Y N N -27.478 33.576 21.477 8.725   2.825  1.194  N39 1T1 31 
1T1 N40 N4  N 0 1 Y N N -29.119 36.582 21.244 10.839  1.630  -1.284 N40 1T1 32 
1T1 N42 N5  N 0 1 Y N N -29.243 36.056 23.462 11.847  3.589  -0.585 N42 1T1 33 
1T1 O07 O1  O 0 1 N N N -27.794 34.486 17.439 6.869   -0.393 -0.523 O07 1T1 34 
1T1 O10 O2  O 0 1 N N N -26.506 33.012 15.481 4.272   -1.628 -0.143 O10 1T1 35 
1T1 O12 O3  O 0 1 N N N -26.593 30.910 14.020 2.596   -3.316 0.702  O12 1T1 36 
1T1 O13 O4  O 0 1 N N N -25.490 30.649 16.344 1.689   -1.134 -0.186 O13 1T1 37 
1T1 O32 O5  O 0 1 N N N -27.002 31.549 17.793 0.245   -2.013 1.237  O32 1T1 38 
1T1 O33 O6  O 0 1 N N N -24.443 31.982 14.411 2.968   -1.253 2.109  O33 1T1 39 
1T1 O35 O7  O 0 1 N N N -24.906 36.473 17.049 8.393   -3.317 -1.411 O35 1T1 40 
1T1 O37 O8  O 0 1 N N N -27.455 37.578 17.777 10.221  -1.687 -0.534 O37 1T1 41 
1T1 P11 P1  P 0 1 N N N -25.758 31.629 15.041 2.875   -1.865 0.622  P11 1T1 42 
1T1 H1  H1  H 0 1 N N N -26.874 28.840 18.406 -0.595  0.413  -0.423 H1  1T1 43 
1T1 H2  H2  H 0 1 N N N -25.100 29.121 18.436 -0.760  -1.015 -1.473 H2  1T1 44 
1T1 H3  H3  H 0 1 N N N -24.939 28.478 20.500 -3.077  0.703  -0.428 H3  1T1 45 
1T1 H4  H4  H 0 1 N N N -24.208 30.097 20.768 -3.242  -0.725 -1.478 H4  1T1 46 
1T1 H5  H5  H 0 1 N N N -26.357 27.053 23.047 -6.950  -0.117 1.294  H5  1T1 47 
1T1 H6  H6  H 0 1 N N N -25.103 26.670 21.819 -7.114  -1.545 0.244  H6  1T1 48 
1T1 H7  H7  H 0 1 N N N -23.672 25.688 23.423 -8.040  1.283  -0.438 H7  1T1 49 
1T1 H8  H8  H 0 1 N N N -24.571 26.415 24.798 -8.205  -0.145 -1.488 H8  1T1 50 
1T1 H9  H9  H 0 1 N N N -26.485 24.922 23.367 -9.596  -1.255 0.239  H9  1T1 51 
1T1 H10 H10 H 0 1 N N N -25.733 24.511 24.946 -9.431  0.173  1.289  H10 1T1 52 
1T1 H11 H11 H 0 1 N N N -23.473 22.104 24.059 -12.077 -0.965 0.234  H11 1T1 53 
1T1 H12 H12 H 0 1 N N N -24.541 22.882 25.275 -11.913 0.463  1.283  H12 1T1 54 
1T1 H13 H13 H 0 1 N N N -23.905 19.737 24.202 -14.559 -0.675 0.228  H13 1T1 55 
1T1 H14 H14 H 0 1 N N N -24.422 20.268 25.839 -14.394 0.753  1.278  H14 1T1 56 
1T1 H15 H15 H 0 1 N N N -24.003 17.781 25.845 -17.041 -0.385 0.223  H15 1T1 57 
1T1 H16 H16 H 0 1 N N N -25.341 18.187 26.973 -16.876 1.043  1.273  H16 1T1 58 
1T1 H17 H17 H 0 1 N N N -29.017 36.014 18.431 8.533   -0.202 -1.778 H17 1T1 59 
1T1 H18 H18 H 0 1 N N N -26.879 35.736 15.883 6.352   -2.022 -1.706 H18 1T1 60 
1T1 H19 H19 H 0 1 N N N -25.123 33.455 16.909 5.394   -3.321 0.232  H19 1T1 61 
1T1 H20 H20 H 0 1 N N N -24.988 34.365 15.366 5.734   -1.927 1.285  H20 1T1 62 
1T1 H21 H21 H 0 1 N N N -26.060 31.220 19.968 -2.151  -2.124 0.254  H21 1T1 63 
1T1 H22 H22 H 0 1 N N N -27.188 29.886 20.387 -1.986  -0.696 1.304  H22 1T1 64 
1T1 H23 H23 H 0 1 N N N -25.346 30.415 22.792 -4.633  -1.834 0.249  H23 1T1 65 
1T1 H24 H24 H 0 1 N N N -26.580 29.167 22.409 -4.468  -0.406 1.299  H24 1T1 66 
1T1 H25 H25 H 0 1 N N N -23.659 28.396 22.615 -5.723  -0.435 -1.483 H25 1T1 67 
1T1 H26 H26 H 0 1 N N N -24.633 28.624 24.107 -5.559  0.993  -0.433 H26 1T1 68 
1T1 H27 H27 H 0 1 N N N -25.558 23.085 22.517 -10.522 1.572  -0.444 H27 1T1 69 
1T1 H28 H28 H 0 1 N N N -23.950 23.852 22.746 -10.687 0.145  -1.493 H28 1T1 70 
1T1 H29 H29 H 0 1 N N N -26.345 21.466 24.788 -13.004 1.862  -0.449 H29 1T1 71 
1T1 H30 H30 H 0 1 N N N -25.690 21.022 23.175 -13.168 0.434  -1.499 H30 1T1 72 
1T1 H31 H31 H 0 1 N N N -26.674 19.095 25.257 -15.485 2.152  -0.454 H31 1T1 73 
1T1 H32 H32 H 0 1 N N N -25.730 18.282 23.964 -15.650 0.724  -1.504 H32 1T1 74 
1T1 H33 H33 H 0 1 N N N -26.695 16.385 26.121 -17.967 2.442  -0.459 H33 1T1 75 
1T1 H34 H34 H 0 1 N N N -25.517 16.054 24.806 -18.131 1.014  -1.509 H34 1T1 76 
1T1 H35 H35 H 0 1 N N N -23.902 15.199 26.314 -19.522 -0.096 0.218  H35 1T1 77 
1T1 H36 H36 H 0 1 N N N -24.738 15.900 27.741 -19.358 1.332  1.268  H36 1T1 78 
1T1 H37 H37 H 0 1 N N N -25.061 13.456 27.622 -20.613 1.304  -1.514 H37 1T1 79 
1T1 H38 H38 H 0 1 N N N -26.618 14.328 27.413 -21.503 1.384  0.025  H38 1T1 80 
1T1 H39 H39 H 0 1 N N N -25.782 13.627 25.986 -20.448 2.732  -0.464 H39 1T1 81 
1T1 H40 H40 H 0 1 N N N -25.394 34.880 18.304 7.781   -3.166 0.571  H40 1T1 82 
1T1 H41 H41 H 0 1 N N N -26.620 36.674 19.463 8.992   -1.219 1.082  H41 1T1 83 
1T1 H42 H42 H 0 1 N N N -26.858 33.141 19.488 7.141   1.433  1.349  H42 1T1 84 
1T1 H43 H43 H 0 1 N N N -30.052 37.776 22.644 12.604  2.361  -2.069 H43 1T1 85 
1T1 H44 H44 H 0 1 N N N -28.710 34.501 25.242 11.682  5.576  1.031  H44 1T1 86 
1T1 H45 H45 H 0 1 N N N -28.742 33.193 24.264 10.243  5.115  1.765  H45 1T1 87 
1T1 H46 H46 H 0 1 N N N -24.429 31.675 13.512 3.149   -0.304 2.133  H46 1T1 88 
1T1 H47 H47 H 0 1 N N N -24.400 36.889 17.737 9.212   -3.801 -1.236 H47 1T1 89 
1T1 H48 H48 H 0 1 N N N -28.127 38.029 18.275 10.627  -2.488 -0.175 H48 1T1 90 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1T1 O12 P11 DOUB N N 1  
1T1 O33 P11 SING N N 2  
1T1 P11 O10 SING N N 3  
1T1 P11 O13 SING N N 4  
1T1 O10 C09 SING N N 5  
1T1 C09 C08 SING N N 6  
1T1 O13 C14 SING N N 7  
1T1 C08 O07 SING N N 8  
1T1 C08 C34 SING N N 9  
1T1 O35 C34 SING N N 10 
1T1 O07 C06 SING N N 11 
1T1 C14 O32 DOUB N N 12 
1T1 C14 C15 SING N N 13 
1T1 C34 C36 SING N N 14 
1T1 O37 C36 SING N N 15 
1T1 C36 C06 SING N N 16 
1T1 C15 C16 SING N N 17 
1T1 C06 N05 SING N N 18 
1T1 N05 C38 SING Y N 19 
1T1 N05 C04 SING Y N 20 
1T1 C16 C17 SING N N 21 
1T1 C38 N39 DOUB Y N 22 
1T1 C17 C18 SING N N 23 
1T1 C04 N40 DOUB Y N 24 
1T1 C04 C03 SING Y N 25 
1T1 N40 C41 SING Y N 26 
1T1 N39 C03 SING Y N 27 
1T1 C03 C02 DOUB Y N 28 
1T1 C18 C19 SING N N 29 
1T1 C41 N42 DOUB Y N 30 
1T1 C20 C19 SING N N 31 
1T1 C20 C21 SING N N 32 
1T1 C23 C22 SING N N 33 
1T1 C23 C24 SING N N 34 
1T1 C02 N42 SING Y N 35 
1T1 C02 N01 SING N N 36 
1T1 C21 C22 SING N N 37 
1T1 C25 C24 SING N N 38 
1T1 C25 C26 SING N N 39 
1T1 C26 C27 SING N N 40 
1T1 C27 C28 SING N N 41 
1T1 C29 C28 SING N N 42 
1T1 C29 C30 SING N N 43 
1T1 C30 C31 SING N N 44 
1T1 C15 H1  SING N N 45 
1T1 C15 H2  SING N N 46 
1T1 C17 H3  SING N N 47 
1T1 C17 H4  SING N N 48 
1T1 C20 H5  SING N N 49 
1T1 C20 H6  SING N N 50 
1T1 C21 H7  SING N N 51 
1T1 C21 H8  SING N N 52 
1T1 C22 H9  SING N N 53 
1T1 C22 H10 SING N N 54 
1T1 C24 H11 SING N N 55 
1T1 C24 H12 SING N N 56 
1T1 C26 H13 SING N N 57 
1T1 C26 H14 SING N N 58 
1T1 C28 H15 SING N N 59 
1T1 C28 H16 SING N N 60 
1T1 C06 H17 SING N N 61 
1T1 C08 H18 SING N N 62 
1T1 C09 H19 SING N N 63 
1T1 C09 H20 SING N N 64 
1T1 C16 H21 SING N N 65 
1T1 C16 H22 SING N N 66 
1T1 C18 H23 SING N N 67 
1T1 C18 H24 SING N N 68 
1T1 C19 H25 SING N N 69 
1T1 C19 H26 SING N N 70 
1T1 C23 H27 SING N N 71 
1T1 C23 H28 SING N N 72 
1T1 C25 H29 SING N N 73 
1T1 C25 H30 SING N N 74 
1T1 C27 H31 SING N N 75 
1T1 C27 H32 SING N N 76 
1T1 C29 H33 SING N N 77 
1T1 C29 H34 SING N N 78 
1T1 C30 H35 SING N N 79 
1T1 C30 H36 SING N N 80 
1T1 C31 H37 SING N N 81 
1T1 C31 H38 SING N N 82 
1T1 C31 H39 SING N N 83 
1T1 C34 H40 SING N N 84 
1T1 C36 H41 SING N N 85 
1T1 C38 H42 SING N N 86 
1T1 C41 H43 SING N N 87 
1T1 N01 H44 SING N N 88 
1T1 N01 H45 SING N N 89 
1T1 O33 H46 SING N N 90 
1T1 O35 H47 SING N N 91 
1T1 O37 H48 SING N N 92 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1T1 SMILES           ACDLabs              12.01 "CCCCCCCCCCCCCCCCCC(=O)OP(=O)(O)OCC1OC(n2cnc3c(N)ncnc32)C(O)C1O"                                                                                                                                                                      
1T1 InChI            InChI                1.03  "InChI=1S/C28H48N5O8P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-22(34)41-42(37,38)39-18-21-24(35)25(36)28(40-21)33-20-32-23-26(29)30-19-31-27(23)33/h19-21,24-25,28,35-36H,2-18H2,1H3,(H,37,38)(H2,29,30,31)/t21-,24-,25-,28-/m1/s1" 
1T1 InChIKey         InChI                1.03  SWOLRYFPKWBFHG-VGSCBBJJSA-N                                                                                                                                                                                                           
1T1 SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCCCCCC(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23"                                                                                                                                                   
1T1 SMILES           CACTVS               3.385 "CCCCCCCCCCCCCCCCCC(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23"                                                                                                                                                        
1T1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCCCC(=O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O"                                                                                                                                                    
1T1 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCCCC(=O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O"                                                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1T1 "SYSTEMATIC NAME" ACDLabs              12.01 "5'-O-[(R)-hydroxy(octadecanoyloxy)phosphoryl]adenosine"                                                                    
1T1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] octadecanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1T1 "Create component" 2021-06-25 RCSB 
1T1 "Initial release"  2022-07-06 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      1T1 
_pdbx_chem_comp_synonyms.name         "5'-O-[(R)-hydroxy(octadecanoyloxy)phosphoryl]adenosine" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
