data_0J1
#

_chem_comp.id                                   0J1
_chem_comp.name                                 "(2R)-3-{[(R)-hydroxy{[(1S,2R,3S,4S,5R,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dinonanoate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H52 O16 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-07
_chem_comp.pdbx_modified_date                   2020-08-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       694.640
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0J1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7JM6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0J1  C02   C1   C  0  1  N  N  N  114.103  152.948  134.844  15.007  -2.986  -0.731  C02   0J1   1  
0J1  C03   C2   C  0  1  N  N  N  114.901  153.513  136.006  13.837  -2.148  -0.212  C03   0J1   2  
0J1  C04   C3   C  0  1  N  N  N  114.706  152.711  137.290  12.517  -2.803  -0.627  C04   0J1   3  
0J1  C05   C4   C  0  1  N  N  N  114.645  153.603  138.529  11.347  -1.966  -0.108  C05   0J1   4  
0J1  C06   C5   C  0  1  N  N  N  114.810  152.798  139.830  10.028  -2.621  -0.522  C06   0J1   5  
0J1  C07   C6   C  0  1  N  N  N  114.796  153.695  141.078   8.858  -1.783  -0.003  C07   0J1   6  
0J1  C08   C7   C  0  1  N  N  N  114.793  152.877  142.370   7.538  -2.438  -0.417  C08   0J1   7  
0J1  C09   C8   C  0  1  N  N  N  115.911  153.309  143.329   6.368  -1.600   0.102  C09   0J1   8  
0J1  C10   C9   C  0  1  N  N  N  115.656  154.668  143.999   5.069  -2.246  -0.306  C10   0J1   9  
0J1  C13   C10  C  0  1  N  N  N  113.942  154.087  145.540   2.689  -2.358  -0.385  C13   0J1  10  
0J1  C14   C11  C  0  1  N  N  R  113.193  154.886  146.619   1.469  -1.574   0.101  C14   0J1  11  
0J1  C15   C12  C  0  1  N  N  N  113.965  154.922  147.959   0.195  -2.349  -0.240  C15   0J1  12  
0J1  C21   C13  C  0  1  N  N  S  115.477  155.640  151.603  -4.887  -1.281   0.704  C21   0J1  13  
0J1  C22   C14  C  0  1  N  N  R  116.144  154.315  151.223  -5.475  -1.351   2.115  C22   0J1  14  
0J1  C24   C15  C  0  1  N  N  S  117.272  153.883  152.145  -6.995  -1.499   2.028  C24   0J1  15  
0J1  C26   C16  C  0  1  N  N  S  118.154  155.065  152.500  -7.583  -0.295   1.290  C26   0J1  16  
0J1  C28   C17  C  0  1  N  N  R  117.386  156.052  153.366  -6.996  -0.225  -0.122  C28   0J1  17  
0J1  C34   C18  C  0  1  N  N  R  115.969  156.356  152.874  -5.476  -0.077  -0.035  C34   0J1  18  
0J1  C37   C19  C  0  1  N  N  N  111.893  152.911  147.074   2.074   0.731   0.062  C37   0J1  19  
0J1  C39   C20  C  0  1  N  N  N  111.564  151.931  145.923   2.083   2.105  -0.557  C39   0J1  20  
0J1  C40   C21  C  0  1  N  N  N  110.322  151.053  146.241   2.873   3.062   0.338  C40   0J1  21  
0J1  C41   C22  C  0  1  N  N  N  110.670  149.549  146.279   2.882   4.458  -0.290  C41   0J1  22  
0J1  C42   C23  C  0  1  N  N  N  109.415  148.641  146.365   3.672   5.415   0.605  C42   0J1  23  
0J1  C43   C24  C  0  1  N  N  N  109.138  147.912  145.046   3.681   6.810  -0.023  C43   0J1  24  
0J1  C44   C25  C  0  1  N  N  N  110.103  146.743  144.808   4.471   7.767   0.872  C44   0J1  25  
0J1  C45   C26  C  0  1  N  N  N  110.073  146.275  143.353   4.480   9.162   0.244  C45   0J1  26  
0J1  C46   C27  C  0  1  N  N  N  111.299  146.750  142.575   5.270  10.119   1.139  C46   0J1  27  
0J1  O11   O1   O  0  1  N  N  N  115.866  155.666  143.405   5.078  -3.270  -0.946  O11   0J1  28  
0J1  O12   O2   O  0  1  N  N  N  115.189  154.725  145.336   3.901  -1.682   0.042  O12   0J1  29  
0J1  O16   O3   O  0  1  N  N  N  114.518  156.205  148.096  -0.936  -1.675   0.315  O16   0J1  30  
0J1  O18   O4   O  0  1  N  N  N  114.482  158.477  149.330  -2.750  -2.395  -1.286  O18   0J1  31  
0J1  O19   O5   O  0  1  N  N  N  113.094  156.666  150.206  -2.599  -3.621   0.915  O19   0J1  32  
0J1  O20   O6   O  0  1  N  N  N  115.686  156.533  150.513  -3.467  -1.143   0.785  O20   0J1  33  
0J1  O23   O7   O  0  1  N  N  N  115.160  153.320  151.240  -4.925  -2.476   2.804  O23   0J1  34  
0J1  O25   O8   O  0  1  N  N  N  118.049  152.916  151.498  -7.543  -1.564   3.346  O25   0J1  35  
0J1  O27   O9   O  0  1  N  N  N  119.271  154.597  153.206  -9.003  -0.433   1.208  O27   0J1  36  
0J1  O29   O10  O  0  1  N  N  N  118.089  157.251  153.400  -7.545   0.899  -0.811  O29   0J1  37  
0J1  O31   O11  O  0  1  N  N  N  118.003  157.997  155.863  -8.960   2.209  -2.598  O31   0J1  38  
0J1  O32   O12  O  0  1  N  N  N  119.772  156.433  155.163  -7.434   0.203  -3.344  O32   0J1  39  
0J1  O33   O13  O  0  1  N  N  N  119.853  158.792  154.457  -9.517  -0.170  -1.968  O33   0J1  40  
0J1  O35   O14  O  0  1  N  N  N  115.898  157.725  152.633  -5.154   1.120   0.675  O35   0J1  41  
0J1  O36   O15  O  0  1  N  N  N  111.916  154.312  146.838   1.436  -0.277  -0.553  O36   0J1  42  
0J1  O38   O16  O  0  1  N  N  N  112.120  152.491  148.160   2.642   0.537   1.111  O38   0J1  43  
0J1  P17   P1   P  0  1  N  N  N  114.410  156.994  149.555  -2.445  -2.213   0.151  P17   0J1  44  
0J1  P30   P2   P  0  1  N  N  N  118.946  157.624  154.749  -8.389   0.765  -2.176  P30   0J1  45  
0J1  H021  H1   H  0  0  N  N  N  114.278  153.560  133.947  15.947  -2.520  -0.436  H021  0J1  46  
0J1  H022  H2   H  0  0  N  N  N  114.421  151.913  134.650  14.951  -3.989  -0.309  H022  0J1  47  
0J1  H1    H3   H  0  1  N  N  N  113.032  152.962  135.094  14.957  -3.046  -1.819  H1    0J1  48  
0J1  H032  H4   H  0  0  N  N  N  115.968  153.501  135.741  13.887  -2.088   0.875  H032  0J1  49  
0J1  H031  H5   H  0  0  N  N  N  114.579  154.550  136.185  13.892  -1.145  -0.635  H031  0J1  50  
0J1  H042  H6   H  0  0  N  N  N  113.765  152.146  137.214  12.467  -2.864  -1.714  H042  0J1  51  
0J1  H041  H7   H  0  0  N  N  N  115.547  152.010  137.400  12.462  -3.807  -0.204  H041  0J1  52  
0J1  H051  H8   H  0  0  N  N  N  115.451  154.349  138.469  11.397  -1.905   0.980  H051  0J1  53  
0J1  H052  H9   H  0  0  N  N  N  113.672  154.115  138.550  11.403  -0.962  -0.530  H052  0J1  54  
0J1  H061  H10  H  0  0  N  N  N  113.985  152.075  139.905   9.978  -2.681  -1.609  H061  0J1  55  
0J1  H062  H11  H  0  0  N  N  N  115.768  152.259  139.793   9.972  -3.624  -0.099  H062  0J1  56  
0J1  H071  H12  H  0  0  N  N  N  115.690  154.336  141.065   8.908  -1.723   1.084  H071  0J1  57  
0J1  H072  H13  H  0  0  N  N  N  113.894  154.324  141.053   8.913  -0.780  -0.425  H072  0J1  58  
0J1  H081  H14  H  0  0  N  N  N  113.823  153.011  142.872   7.488  -2.498  -1.504  H081  0J1  59  
0J1  H082  H15  H  0  0  N  N  N  114.932  151.815  142.118   7.483  -3.441   0.006  H082  0J1  60  
0J1  H092  H16  H  0  0  N  N  N  116.008  152.546  144.116   6.418  -1.540   1.189  H092  0J1  61  
0J1  H091  H17  H  0  0  N  N  N  116.851  153.372  142.761   6.424  -0.597  -0.320  H091  0J1  62  
0J1  H131  H18  H  0  0  N  N  N  113.363  154.083  144.604   2.666  -3.363   0.037  H131  0J1  63  
0J1  H132  H19  H  0  0  N  N  N  114.099  153.052  145.878   2.672  -2.420  -1.473  H132  0J1  64  
0J1  H141  H20  H  0  0  N  N  N  113.080  155.921  146.263   1.532  -1.435   1.180  H141  0J1  65  
0J1  H151  H21  H  0  0  N  N  N  113.278  154.719  148.793   0.086  -2.411  -1.323  H151  0J1  66  
0J1  H152  H22  H  0  0  N  N  N  114.765  154.167  147.951   0.259  -3.354   0.176  H152  0J1  67  
0J1  H211  H23  H  0  0  N  N  N  114.399  155.454  151.718  -5.133  -2.195   0.162  H211  0J1  68  
0J1  H221  H24  H  0  0  N  N  N  116.552  154.418  150.207  -5.229  -0.437   2.656  H221  0J1  69  
0J1  H241  H25  H  0  0  N  N  N  116.838  153.473  153.069  -7.241  -2.412   1.487  H241  0J1  70  
0J1  H261  H26  H  0  0  N  N  N  118.465  155.570  151.574  -7.337   0.619   1.831  H261  0J1  71  
0J1  H281  H27  H  0  0  N  N  N  117.312  155.632  154.380  -7.242  -1.139  -0.663  H281  0J1  72  
0J1  H341  H28  H  0  0  N  N  N  115.275  156.095  153.686  -5.057  -0.028  -1.040  H341  0J1  73  
0J1  H392  H29  H  0  0  N  N  N  112.430  151.274  145.758   2.550   2.058  -1.540  H392  0J1  74  
0J1  H391  H30  H  0  0  N  N  N  111.364  152.511  145.010   1.059   2.465  -0.658  H391  0J1  75  
0J1  H402  H31  H  0  0  N  N  N  109.920  151.349  147.221   2.406   3.110   1.322  H402  0J1  76  
0J1  H401  H32  H  0  0  N  N  N  109.560  151.222  145.466   3.897   2.703   0.439  H401  0J1  77  
0J1  H411  H33  H  0  0  N  N  N  111.226  149.294  145.365   3.349   4.411  -1.273  H411  0J1  78  
0J1  H412  H34  H  0  0  N  N  N  111.303  149.357  147.158   1.858   4.817  -0.391  H412  0J1  79  
0J1  H422  H35  H  0  0  N  N  N  108.544  149.264  146.616   3.205   5.462   1.589  H422  0J1  80  
0J1  H421  H36  H  0  0  N  N  N  109.572  147.894  147.157   4.696   5.055   0.706  H421  0J1  81  
0J1  H432  H37  H  0  0  N  N  N  109.241  148.629  144.218   4.148   6.763  -1.007  H432  0J1  82  
0J1  H431  H38  H  0  0  N  N  N  108.110  147.522  145.067   2.657   7.169  -0.124  H431  0J1  83  
0J1  H442  H39  H  0  0  N  N  N  109.815  145.904  145.459   4.003   7.814   1.855  H442  0J1  84  
0J1  H441  H40  H  0  0  N  N  N  111.124  147.067  145.058   5.495   7.408   0.973  H441  0J1  85  
0J1  H452  H41  H  0  0  N  N  N  109.169  146.674  142.870   4.947   9.115  -0.740  H452  0J1  86  
0J1  H451  H42  H  0  0  N  N  N  110.044  145.176  143.334   3.456   9.521   0.143  H451  0J1  87  
0J1  H462  H43  H  0  0  N  N  N  111.236  146.392  141.537   5.276  11.113   0.691  H462  0J1  88  
0J1  H461  H44  H  0  0  N  N  N  111.334  147.849  142.582   4.802  10.166   2.122  H461  0J1  89  
0J1  H2    H45  H  0  1  N  N  N  112.209  146.351  143.046   6.294   9.760   1.240  H2    0J1  90  
0J1  H3    H46  H  0  1  N  N  N  112.595  157.465  150.333  -2.413  -3.576   1.863  H3    0J1  91  
0J1  H231  H47  H  0  0  N  N  N  115.549  152.485  151.007  -5.254  -2.582   3.708  H231  0J1  92  
0J1  H251  H48  H  0  0  N  N  N  118.756  152.642  152.070  -8.506  -1.658   3.367  H251  0J1  93  
0J1  H271  H49  H  0  0  N  N  N  119.832  155.329  153.434  -9.443  -0.483   2.068  H271  0J1  94  
0J1  H4    H50  H  0  1  N  N  N  118.180  158.887  156.144  -9.480   2.204  -3.414  H4    0J1  95  
0J1  H5    H51  H  0  1  N  N  N  120.693  156.667  155.154  -6.672   0.767  -3.534  H5    0J1  96  
0J1  H351  H52  H  0  0  N  N  N  116.196  158.198  153.401  -5.496   1.926   0.263  H351  0J1  97  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0J1  C02  C03   SING  N  N   1  
0J1  C03  C04   SING  N  N   2  
0J1  C04  C05   SING  N  N   3  
0J1  C05  C06   SING  N  N   4  
0J1  C06  C07   SING  N  N   5  
0J1  C07  C08   SING  N  N   6  
0J1  C08  C09   SING  N  N   7  
0J1  C46  C45   SING  N  N   8  
0J1  C09  C10   SING  N  N   9  
0J1  C45  C44   SING  N  N  10  
0J1  O11  C10   DOUB  N  N  11  
0J1  C10  O12   SING  N  N  12  
0J1  C44  C43   SING  N  N  13  
0J1  C43  C42   SING  N  N  14  
0J1  O12  C13   SING  N  N  15  
0J1  C13  C14   SING  N  N  16  
0J1  C39  C40   SING  N  N  17  
0J1  C39  C37   SING  N  N  18  
0J1  C40  C41   SING  N  N  19  
0J1  C41  C42   SING  N  N  20  
0J1  C14  O36   SING  N  N  21  
0J1  C14  C15   SING  N  N  22  
0J1  O36  C37   SING  N  N  23  
0J1  C37  O38   DOUB  N  N  24  
0J1  C15  O16   SING  N  N  25  
0J1  O16  P17   SING  N  N  26  
0J1  O18  P17   DOUB  N  N  27  
0J1  P17  O19   SING  N  N  28  
0J1  P17  O20   SING  N  N  29  
0J1  O20  C21   SING  N  N  30  
0J1  C22  O23   SING  N  N  31  
0J1  C22  C21   SING  N  N  32  
0J1  C22  C24   SING  N  N  33  
0J1  O25  C24   SING  N  N  34  
0J1  C21  C34   SING  N  N  35  
0J1  C24  C26   SING  N  N  36  
0J1  C26  O27   SING  N  N  37  
0J1  C26  C28   SING  N  N  38  
0J1  O35  C34   SING  N  N  39  
0J1  C34  C28   SING  N  N  40  
0J1  C28  O29   SING  N  N  41  
0J1  O29  P30   SING  N  N  42  
0J1  O33  P30   DOUB  N  N  43  
0J1  P30  O32   SING  N  N  44  
0J1  P30  O31   SING  N  N  45  
0J1  C02  H021  SING  N  N  46  
0J1  C02  H022  SING  N  N  47  
0J1  C02  H1    SING  N  N  48  
0J1  C03  H032  SING  N  N  49  
0J1  C03  H031  SING  N  N  50  
0J1  C04  H042  SING  N  N  51  
0J1  C04  H041  SING  N  N  52  
0J1  C05  H051  SING  N  N  53  
0J1  C05  H052  SING  N  N  54  
0J1  C06  H061  SING  N  N  55  
0J1  C06  H062  SING  N  N  56  
0J1  C07  H071  SING  N  N  57  
0J1  C07  H072  SING  N  N  58  
0J1  C08  H081  SING  N  N  59  
0J1  C08  H082  SING  N  N  60  
0J1  C09  H092  SING  N  N  61  
0J1  C09  H091  SING  N  N  62  
0J1  C13  H131  SING  N  N  63  
0J1  C13  H132  SING  N  N  64  
0J1  C14  H141  SING  N  N  65  
0J1  C15  H151  SING  N  N  66  
0J1  C15  H152  SING  N  N  67  
0J1  C21  H211  SING  N  N  68  
0J1  C22  H221  SING  N  N  69  
0J1  C24  H241  SING  N  N  70  
0J1  C26  H261  SING  N  N  71  
0J1  C28  H281  SING  N  N  72  
0J1  C34  H341  SING  N  N  73  
0J1  C39  H392  SING  N  N  74  
0J1  C39  H391  SING  N  N  75  
0J1  C40  H402  SING  N  N  76  
0J1  C40  H401  SING  N  N  77  
0J1  C41  H411  SING  N  N  78  
0J1  C41  H412  SING  N  N  79  
0J1  C42  H422  SING  N  N  80  
0J1  C42  H421  SING  N  N  81  
0J1  C43  H432  SING  N  N  82  
0J1  C43  H431  SING  N  N  83  
0J1  C44  H442  SING  N  N  84  
0J1  C44  H441  SING  N  N  85  
0J1  C45  H452  SING  N  N  86  
0J1  C45  H451  SING  N  N  87  
0J1  C46  H462  SING  N  N  88  
0J1  C46  H461  SING  N  N  89  
0J1  C46  H2    SING  N  N  90  
0J1  O19  H3    SING  N  N  91  
0J1  O23  H231  SING  N  N  92  
0J1  O25  H251  SING  N  N  93  
0J1  O27  H271  SING  N  N  94  
0J1  O31  H4    SING  N  N  95  
0J1  O32  H5    SING  N  N  96  
0J1  O35  H351  SING  N  N  97  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0J1  SMILES            ACDLabs               12.01  "CCCCCCCCC(OCC(OC(=O)CCCCCCCC)COP(=O)(O)OC1C(C(C(C(C1O)O)O)OP(O)(O)=O)O)=O"  
0J1  InChI             InChI                 1.03   "InChI=1S/C27H52O16P2/c1-3-5-7-9-11-13-15-20(28)39-17-19(41-21(29)16-14-12-10-8-6-4-2)18-40-45(37,38)43-27-24(32)22(30)23(31)26(25(27)33)42-44(34,35)36/h19,22-27,30-33H,3-18H2,1-2H3,(H,37,38)(H2,34,35,36)/t19-,22+,23+,24-,25-,26-,27+/m1/s1"  
0J1  InChIKey          InChI                 1.03   IELCLCXLJSIZNX-ZAIPYKEWSA-N  
0J1  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O[P](O)(O)=O)[C@H]1O)OC(=O)CCCCCCCC"  
0J1  SMILES            CACTVS                3.385  "CCCCCCCCC(=O)OC[CH](CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O[P](O)(O)=O)[CH]1O)OC(=O)CCCCCCCC"  
0J1  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H]([C@H]1O)OP(=O)(O)O)O)O)O)OC(=O)CCCCCCCC"  
0J1  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCCCC(=O)OCC(COP(=O)(O)OC1C(C(C(C(C1O)OP(=O)(O)O)O)O)O)OC(=O)CCCCCCCC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0J1  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-3-{[(R)-hydroxy{[(1S,2R,3S,4S,5R,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dinonanoate"  
0J1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(2~{R})-2-nonanoyloxy-3-[oxidanyl-[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2,3,4,6-tetrakis(oxidanyl)-5-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] nonanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0J1  "Create component"  2020-08-07  RCSB  
0J1  "Initial release"   2020-09-02  RCSB  
##
