data_YZ0
#

_chem_comp.id                                   YZ0
_chem_comp.name                                 "methyl beta-D-mannopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O6"
_chem_comp.mon_nstd_parent_comp_id              BMA
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       194.182
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YZ0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3BVW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YZ0  C1    C1    C  0  1  N  N  R  21.915  68.754  13.358   1.271   0.463   0.469  C1    YZ0   1  
YZ0  C1M   C1M   C  0  1  N  N  N  23.073  70.383  14.495   3.561  -0.242   0.396  C1M   YZ0   2  
YZ0  C2    C2    C  0  1  N  N  S  20.891  68.426  12.287   0.353   1.635   0.116  C2    YZ0   3  
YZ0  C3    C3    C  0  1  N  N  S  20.728  66.915  12.155  -1.078   1.302   0.550  C3    YZ0   4  
YZ0  C4    C4    C  0  1  N  N  S  22.052  66.315  11.707  -1.514  -0.002  -0.125  C4    YZ0   5  
YZ0  C5    C5    C  0  1  N  N  R  23.269  67.117  12.219  -0.523  -1.111   0.238  C5    YZ0   6  
YZ0  C6    C6    C  0  1  N  N  N  24.088  67.915  11.212  -0.918  -2.403  -0.481  C6    YZ0   7  
YZ0  O1    O1    O  0  1  N  N  N  22.162  70.163  13.432   2.598   0.743   0.017  O1    YZ0   8  
YZ0  O2    O2    O  0  1  N  N  N  21.333  68.981  11.047   0.384   1.857  -1.296  O2    YZ0   9  
YZ0  O3    O3    O  0  1  N  N  N  19.740  66.549  11.198  -1.955   2.360   0.158  O3    YZ0  10  
YZ0  O4    O4    O  0  1  N  N  N  22.112  64.922  12.075  -2.821  -0.360   0.328  O4    YZ0  11  
YZ0  O5    O5    O  0  1  N  N  N  23.163  68.095  13.219   0.792  -0.725  -0.165  O5    YZ0  12  
YZ0  O6    O6    O  0  1  N  N  N  25.216  68.263  12.009  -0.065  -3.466  -0.052  O6    YZ0  13  
YZ0  H1    H1    H  0  1  N  N  N  21.476  68.443  14.317   1.279   0.319   1.550  H1    YZ0  14  
YZ0  H1M1  H1M1  H  0  0  N  N  N  23.285  71.459  14.580   3.600  -0.312   1.483  H1M1  YZ0  15  
YZ0  H1M2  H1M2  H  0  0  N  N  N  24.008  69.840  14.295   3.276  -1.208  -0.021  H1M2  YZ0  16  
YZ0  H1M3  H1M3  H  0  0  N  N  N  22.633  70.021  15.436   4.542   0.043   0.015  H1M3  YZ0  17  
YZ0  H2    H2    H  0  1  N  N  N  19.923  68.863  12.574   0.692   2.533   0.633  H2    YZ0  18  
YZ0  HO2   HO2   H  0  1  N  N  N  20.700  68.783  10.367   1.262   2.069  -1.641  HO2   YZ0  19  
YZ0  H3    H3    H  0  1  N  N  N  20.469  66.502  13.141  -1.112   1.183   1.633  H3    YZ0  20  
YZ0  HO3   HO3   H  0  1  N  N  N  19.677  65.602  11.153  -1.733   3.218   0.544  HO3   YZ0  21  
YZ0  H4    H4    H  0  1  N  N  N  22.075  66.375  10.609  -1.528   0.134  -1.206  H4    YZ0  22  
YZ0  HO4   HO4   H  0  1  N  N  N  22.941  64.555  11.792  -3.499   0.301   0.135  HO4   YZ0  23  
YZ0  H5    H5    H  0  1  N  N  N  23.962  66.355  12.607  -0.540  -1.275   1.316  H5    YZ0  24  
YZ0  H62   H61   H  0  1  N  N  N  23.546  68.807  10.864  -1.953  -2.649  -0.243  H62   YZ0  25  
YZ0  H61   H62   H  0  1  N  N  N  24.377  67.301  10.346  -0.816  -2.266  -1.557  H61   YZ0  26  
YZ0  HO6   HO6   H  0  1  N  N  N  25.824  68.777  11.491  -0.258  -4.318  -0.468  HO6   YZ0  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YZ0  C1   O5    SING  N  N   1  
YZ0  C1   O1    SING  N  N   2  
YZ0  C1   C2    SING  N  N   3  
YZ0  C1   H1    SING  N  N   4  
YZ0  C1M  O1    SING  N  N   5  
YZ0  C1M  H1M1  SING  N  N   6  
YZ0  C1M  H1M3  SING  N  N   7  
YZ0  C1M  H1M2  SING  N  N   8  
YZ0  C2   O2    SING  N  N   9  
YZ0  C2   C3    SING  N  N  10  
YZ0  C2   H2    SING  N  N  11  
YZ0  C3   O3    SING  N  N  12  
YZ0  C3   H3    SING  N  N  13  
YZ0  C3   C4    SING  N  N  14  
YZ0  C4   H4    SING  N  N  15  
YZ0  C4   O4    SING  N  N  16  
YZ0  C4   C5    SING  N  N  17  
YZ0  C5   O5    SING  N  N  18  
YZ0  C5   H5    SING  N  N  19  
YZ0  C5   C6    SING  N  N  20  
YZ0  C6   H61   SING  N  N  21  
YZ0  C6   H62   SING  N  N  22  
YZ0  C6   O6    SING  N  N  23  
YZ0  O2   HO2   SING  N  N  24  
YZ0  O3   HO3   SING  N  N  25  
YZ0  O4   HO4   SING  N  N  26  
YZ0  O6   HO6   SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YZ0  SMILES            ACDLabs               12.01  "OC1C(O)C(O)C(OC1OC)CO"  
YZ0  InChI             InChI                 1.03   "InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4-,5+,6+,7-/m1/s1"  
YZ0  InChIKey          InChI                 1.03   HOVAGTYPODGVJG-ULQPCXBYSA-N  
YZ0  SMILES_CANONICAL  CACTVS                3.370  "CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O"  
YZ0  SMILES            CACTVS                3.370  "CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"  
YZ0  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CO[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O"  
YZ0  SMILES            "OpenEye OEToolkits"  1.7.6  "COC1C(C(C(C(O1)CO)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YZ0  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl beta-D-mannopyranoside"  
YZ0  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,3S,4S,5S,6R)-2-(hydroxymethyl)-6-methoxy-oxane-3,4,5-triol"  
#
_pdbx_chem_comp_related.comp_id            YZ0
_pdbx_chem_comp_related.related_comp_id    BMA
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  YZ0  C1   BMA  C1   "Carbohydrate core"  
 2  YZ0  C2   BMA  C2   "Carbohydrate core"  
 3  YZ0  C3   BMA  C3   "Carbohydrate core"  
 4  YZ0  C4   BMA  C4   "Carbohydrate core"  
 5  YZ0  C5   BMA  C5   "Carbohydrate core"  
 6  YZ0  C6   BMA  C6   "Carbohydrate core"  
 7  YZ0  O1   BMA  O1   "Carbohydrate core"  
 8  YZ0  O2   BMA  O2   "Carbohydrate core"  
 9  YZ0  O3   BMA  O3   "Carbohydrate core"  
10  YZ0  O4   BMA  O4   "Carbohydrate core"  
11  YZ0  O5   BMA  O5   "Carbohydrate core"  
12  YZ0  O6   BMA  O6   "Carbohydrate core"  
13  YZ0  H1   BMA  H1   "Carbohydrate core"  
14  YZ0  H2   BMA  H2   "Carbohydrate core"  
15  YZ0  H3   BMA  H3   "Carbohydrate core"  
16  YZ0  H4   BMA  H4   "Carbohydrate core"  
17  YZ0  H5   BMA  H5   "Carbohydrate core"  
18  YZ0  H62  BMA  H62  "Carbohydrate core"  
19  YZ0  H61  BMA  H61  "Carbohydrate core"  
20  YZ0  HO2  BMA  HO2  "Carbohydrate core"  
21  YZ0  HO3  BMA  HO3  "Carbohydrate core"  
22  YZ0  HO4  BMA  HO4  "Carbohydrate core"  
23  YZ0  HO6  BMA  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
YZ0  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
YZ0  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
YZ0  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
YZ0  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YZ0  "Create component"          2012-12-18  RCSB  
YZ0  "Modify atom id"            2013-02-18  RCSB  
YZ0  "Modify atom id"            2020-05-09  RCSB  
YZ0  "Modify atom id"            2020-07-17  RCSB  
YZ0  "Modify component atom id"  2020-07-17  RCSB  
YZ0  "Initial release"           2020-07-29  RCSB  
##
