data_YW0
# 
_chem_comp.id                                    YW0 
_chem_comp.name                                  "methyl 2-formyl-2-[4-(undec-10-ynamido)phenyl]hydrazine-1-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H27 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        373.446 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YW0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8T88 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YW0 C10 C1  C 0 1 N N N N N N -24.983 -22.020 -15.024 -2.086  1.505  -0.208 C10 YW0 1  
YW0 C13 C2  C 0 1 Y N N N N N -28.214 -18.648 -15.967 1.868   0.363  1.065  C13 YW0 2  
YW0 C15 C3  C 0 1 Y N N N N N -28.755 -17.584 -18.045 4.222   0.406  0.607  C15 YW0 3  
YW0 C11 C4  C 0 1 N N N N N N -25.317 -20.749 -15.776 -0.686  0.972  -0.046 C11 YW0 4  
YW0 C12 C5  C 0 1 Y N N N N N -27.289 -19.469 -16.609 1.663   1.332  0.092  C12 YW0 5  
YW0 C14 C6  C 0 1 Y N N N N N -28.920 -17.700 -16.672 3.144   -0.096 1.324  C14 YW0 6  
YW0 C16 C7  C 0 1 N N N N N N -29.186 -16.196 -20.030 5.716   -0.996 1.819  C16 YW0 7  
YW0 C1  C8  C 0 1 N N N N N N -20.658 -25.238 -8.290  -12.826 -0.494 -0.249 C1  YW0 8  
YW0 C17 C9  C 0 1 N N N N N N -31.803 -16.670 -18.168 7.178   -0.299 -0.818 C17 YW0 9  
YW0 C18 C10 C 0 1 N N N N N N -32.298 -15.121 -16.352 7.375   -2.279 -2.136 C18 YW0 10 
YW0 C19 C11 C 0 1 Y N N N N N -27.905 -18.462 -18.709 4.016   1.370  -0.371 C19 YW0 11 
YW0 C2  C12 C 0 1 N N N N N N -19.729 -24.983 -8.998  -11.735 -0.910 -0.123 C2  YW0 12 
YW0 C20 C13 C 0 1 Y N N N N N -27.187 -19.404 -17.999 2.741   1.834  -0.626 C20 YW0 13 
YW0 C3  C14 C 0 1 N N N N N N -18.758 -24.341 -9.890  -10.367 -1.430 0.035  C3  YW0 14 
YW0 C4  C15 C 0 1 N N N N N N -19.369 -23.346 -10.871 -9.363  -0.291 -0.149 C4  YW0 15 
YW0 C5  C16 C 0 1 N N N N N N -20.539 -23.896 -11.670 -7.941  -0.832 0.015  C5  YW0 16 
YW0 C6  C17 C 0 1 N N N N N N -21.506 -22.835 -12.186 -6.937  0.308  -0.169 C6  YW0 17 
YW0 C7  C18 C 0 1 N N N N N N -22.966 -23.078 -11.825 -5.516  -0.233 -0.004 C7  YW0 18 
YW0 C8  C19 C 0 1 N N N N N N -23.921 -23.151 -13.009 -4.512  0.906  -0.189 C8  YW0 19 
YW0 C9  C20 C 0 1 N N N N N N -24.088 -21.858 -13.804 -3.090  0.365  -0.024 C9  YW0 20 
YW0 N1  N1  N 0 1 N N N N N N -26.634 -20.442 -15.814 0.369   1.802  -0.167 N1  YW0 21 
YW0 N2  N2  N 0 1 N N N N N N -29.511 -16.603 -18.765 5.516   -0.060 0.869  N2  YW0 22 
YW0 N3  N3  N 0 1 N N N N N N -30.608 -16.013 -18.126 6.604   0.447  0.146  N3  YW0 23 
YW0 O1  O1  O 0 1 N N N N N N -24.445 -20.001 -16.229 -0.508  -0.204 0.193  O1  YW0 24 
YW0 O2  O2  O 0 1 N N N N N N -28.158 -16.446 -20.642 6.837   -1.399 2.046  O2  YW0 25 
YW0 O3  O3  O 0 1 N N N N N N -31.995 -17.666 -18.826 8.121   0.140  -1.446 O3  YW0 26 
YW0 O4  O4  O 0 1 N N N N N N -32.692 -16.146 -17.301 6.708   -1.532 -1.085 O4  YW0 27 
YW0 H17 H1  H 0 1 N N N N N N -25.929 -22.472 -14.690 -2.270  2.276  0.540  H17 YW0 28 
YW0 H16 H2  H 0 1 N N N N N N -24.478 -22.702 -15.724 -2.199  1.932  -1.205 H16 YW0 29 
YW0 H19 H3  H 0 1 N N N N N N -28.379 -18.757 -14.905 1.030   -0.027 1.623  H19 YW0 30 
YW0 H20 H4  H 0 1 N N N N N N -29.605 -17.044 -16.155 3.304   -0.846 2.085  H20 YW0 31 
YW0 H21 H5  H 0 1 N N N N N N -29.917 -15.588 -20.543 4.878   -1.386 2.377  H21 YW0 32 
YW0 H1  H6  H 0 1 N N N N N N -21.482 -25.464 -7.662  -13.801 -0.123 -0.362 H1  YW0 33 
YW0 H24 H7  H 0 1 N N N N N N -33.166 -14.832 -15.742 7.304   -1.729 -3.074 H24 YW0 34 
YW0 H25 H8  H 0 1 N N N N N N -31.504 -15.512 -15.698 8.424   -2.417 -1.874 H25 YW0 35 
YW0 H23 H9  H 0 1 N N N N N N -31.924 -14.241 -16.897 6.898   -3.253 -2.249 H23 YW0 36 
YW0 H26 H10 H 0 1 N N N N N N -27.806 -18.407 -19.783 4.854   1.762  -0.929 H26 YW0 37 
YW0 H27 H11 H 0 1 N N N N N N -26.543 -20.095 -18.523 2.581   2.584  -1.386 H27 YW0 38 
YW0 H3  H12 H 0 1 N N N N N N -18.249 -25.127 -10.468 -10.254 -1.857 1.031  H3  YW0 39 
YW0 H2  H13 H 0 1 N N N N N N -18.022 -23.807 -9.271  -10.183 -2.201 -0.714 H2  YW0 40 
YW0 H5  H14 H 0 1 N N N N N N -18.586 -23.033 -11.577 -9.476  0.136  -1.146 H5  YW0 41 
YW0 H4  H15 H 0 1 N N N N N N -19.720 -22.472 -10.302 -9.547  0.480  0.599  H4  YW0 42 
YW0 H7  H16 H 0 1 N N N N N N -21.100 -24.588 -11.025 -7.828  -1.258 1.012  H7  YW0 43 
YW0 H6  H17 H 0 1 N N N N N N -20.137 -24.444 -12.535 -7.757  -1.603 -0.733 H6  YW0 44 
YW0 H9  H18 H 0 1 N N N N N N -21.425 -22.801 -13.282 -7.051  0.735  -1.165 H9  YW0 45 
YW0 H8  H19 H 0 1 N N N N N N -21.206 -21.864 -11.766 -7.121  1.079  0.580  H8  YW0 46 
YW0 H11 H20 H 0 1 N N N N N N -23.296 -22.258 -11.171 -5.402  -0.660 0.992  H11 YW0 47 
YW0 H10 H21 H 0 1 N N N N N N -23.028 -24.030 -11.278 -5.332  -1.004 -0.753 H10 YW0 48 
YW0 H13 H22 H 0 1 N N N N N N -24.910 -23.444 -12.628 -4.625  1.333  -1.185 H13 YW0 49 
YW0 H12 H23 H 0 1 N N N N N N -23.549 -23.925 -13.696 -4.696  1.677  0.560  H12 YW0 50 
YW0 H15 H24 H 0 1 N N N N N N -23.096 -21.523 -14.140 -2.906  -0.405 -0.773 H15 YW0 51 
YW0 H14 H25 H 0 1 N N N N N N -24.529 -21.096 -13.145 -2.977  -0.061 0.972  H14 YW0 52 
YW0 H18 H26 H 0 1 N N N N N N -27.222 -20.970 -15.201 0.233   2.724  -0.434 H18 YW0 53 
YW0 H22 H27 H 0 1 N N N N N N -30.518 -15.136 -17.653 6.943   1.335  0.338  H22 YW0 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YW0 O2  C16 DOUB N N 1  
YW0 C16 N2  SING N N 2  
YW0 O3  C17 DOUB N N 3  
YW0 N2  N3  SING N N 4  
YW0 N2  C15 SING N N 5  
YW0 C19 C15 DOUB Y N 6  
YW0 C19 C20 SING Y N 7  
YW0 C17 N3  SING N N 8  
YW0 C17 O4  SING N N 9  
YW0 C15 C14 SING Y N 10 
YW0 C20 C12 DOUB Y N 11 
YW0 O4  C18 SING N N 12 
YW0 C14 C13 DOUB Y N 13 
YW0 C12 C13 SING Y N 14 
YW0 C12 N1  SING N N 15 
YW0 O1  C11 DOUB N N 16 
YW0 N1  C11 SING N N 17 
YW0 C11 C10 SING N N 18 
YW0 C10 C9  SING N N 19 
YW0 C9  C8  SING N N 20 
YW0 C8  C7  SING N N 21 
YW0 C6  C7  SING N N 22 
YW0 C6  C5  SING N N 23 
YW0 C5  C4  SING N N 24 
YW0 C4  C3  SING N N 25 
YW0 C3  C2  SING N N 26 
YW0 C2  C1  TRIP N N 27 
YW0 C10 H17 SING N N 28 
YW0 C10 H16 SING N N 29 
YW0 C13 H19 SING N N 30 
YW0 C14 H20 SING N N 31 
YW0 C16 H21 SING N N 32 
YW0 C1  H1  SING N N 33 
YW0 C18 H24 SING N N 34 
YW0 C18 H25 SING N N 35 
YW0 C18 H23 SING N N 36 
YW0 C19 H26 SING N N 37 
YW0 C20 H27 SING N N 38 
YW0 C3  H3  SING N N 39 
YW0 C3  H2  SING N N 40 
YW0 C4  H5  SING N N 41 
YW0 C4  H4  SING N N 42 
YW0 C5  H7  SING N N 43 
YW0 C5  H6  SING N N 44 
YW0 C6  H9  SING N N 45 
YW0 C6  H8  SING N N 46 
YW0 C7  H11 SING N N 47 
YW0 C7  H10 SING N N 48 
YW0 C8  H13 SING N N 49 
YW0 C8  H12 SING N N 50 
YW0 C9  H15 SING N N 51 
YW0 C9  H14 SING N N 52 
YW0 N1  H18 SING N N 53 
YW0 N3  H22 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YW0 SMILES           ACDLabs              12.01 "C#CCCCCCCCCC(=O)Nc1ccc(cc1)N(NC(=O)OC)C=O"                                                                                               
YW0 InChI            InChI                1.06  "InChI=1S/C20H27N3O4/c1-3-4-5-6-7-8-9-10-11-19(25)21-17-12-14-18(15-13-17)23(16-24)22-20(26)27-2/h1,12-16H,4-11H2,2H3,(H,21,25)(H,22,26)" 
YW0 InChIKey         InChI                1.06  DVKLBCMFIZWEBE-UHFFFAOYSA-N                                                                                                               
YW0 SMILES_CANONICAL CACTVS               3.385 "COC(=O)NN(C=O)c1ccc(NC(=O)CCCCCCCCC#C)cc1"                                                                                               
YW0 SMILES           CACTVS               3.385 "COC(=O)NN(C=O)c1ccc(NC(=O)CCCCCCCCC#C)cc1"                                                                                               
YW0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)NN(C=O)c1ccc(cc1)NC(=O)CCCCCCCCC#C"                                                                                               
YW0 SMILES           "OpenEye OEToolkits" 2.0.7 "COC(=O)NN(C=O)c1ccc(cc1)NC(=O)CCCCCCCCC#C"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YW0 "SYSTEMATIC NAME" ACDLabs              12.01 "methyl 2-formyl-2-[4-(undec-10-ynamido)phenyl]hydrazine-1-carboxylate" 
YW0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl ~{N}-[methanoyl-[4-(undec-10-ynoylamino)phenyl]amino]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YW0 "Create component" 2023-06-22 RCSB 
YW0 "Initial release"  2024-03-06 RCSB 
YW0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            YW0 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C16 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
