data_YT0
# 
_chem_comp.id                                    YT0 
_chem_comp.name                                  "[1-{5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl}-3-(4-methylpiperazin-1-yl)azetidin-3-yl]acetonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H26 N8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-20 
_chem_comp.pdbx_modified_date                    2023-06-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        398.528 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YT0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8G8O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YT0 C1  C1  C 0 1 N N N 18.692 16.956 22.025 7.841  1.473  1.281  C1  YT0 1  
YT0 C2  C2  C 0 1 Y N N 18.154 18.072 21.186 6.618  0.713  0.837  C2  YT0 2  
YT0 C3  C3  C 0 1 Y N N 17.000 18.853 21.433 5.351  1.218  1.020  C3  YT0 3  
YT0 C4  C4  C 0 1 Y N N 16.892 19.917 20.608 4.351  0.417  0.567  C4  YT0 4  
YT0 C5  C5  C 0 1 Y N N 15.786 22.040 20.028 2.089  -0.263 0.105  C5  YT0 5  
YT0 C6  C6  C 0 1 Y N N 14.677 24.028 19.795 1.735  -2.295 -0.926 C6  YT0 6  
YT0 C7  C7  C 0 1 Y N N 15.490 24.406 18.752 0.373  -2.070 -0.888 C7  YT0 7  
YT0 N1  N1  N 0 1 N N N 15.890 20.837 20.692 2.981  0.666  0.616  N1  YT0 8  
YT0 C8  C8  C 0 1 N N N 15.275 25.755 18.112 -0.591 -3.084 -1.446 C8  YT0 9  
YT0 C9  C9  C 0 1 Y N N 16.502 23.485 18.378 -0.091 -0.885 -0.311 C9  YT0 10 
YT0 C10 C10 C 0 1 N N N 18.464 22.804 16.823 -1.703 0.683  0.397  C10 YT0 11 
YT0 C11 C11 C 0 1 N N N 18.309 23.522 15.447 -2.777 0.941  -0.669 C11 YT0 12 
YT0 C12 C12 C 0 1 N N N 17.767 22.568 14.398 -2.805 2.377  -1.194 C12 YT0 13 
YT0 C13 C13 C 0 1 N N N 16.321 22.588 14.195 -1.429 2.839  -1.436 C13 YT0 14 
YT0 C14 C14 C 0 1 N N N 19.631 24.996 13.994 -4.859 1.393  0.482  C14 YT0 15 
YT0 C15 C15 C 0 1 N N N 20.991 25.645 13.843 -6.263 0.848  0.755  C15 YT0 16 
YT0 N2  N2  N 0 1 Y N N 14.807 22.865 20.439 2.557  -1.383 -0.427 N2  YT0 17 
YT0 C16 C16 C 0 1 N N N 23.327 25.270 13.439 -7.487 -0.961 1.801  C16 YT0 18 
YT0 C17 C17 C 0 1 N N N 22.026 23.607 14.561 -5.405 -1.413 0.650  C17 YT0 19 
YT0 C18 C18 C 0 1 N N N 20.667 22.981 14.778 -4.001 -0.868 0.377  C18 YT0 20 
YT0 C19 C19 C 0 1 N N N 17.267 24.561 16.100 -1.926 -0.020 -1.511 C19 YT0 21 
YT0 N3  N3  N 0 1 N N N 17.374 23.682 17.273 -1.449 -0.618 -0.251 N3  YT0 22 
YT0 N4  N4  N 0 1 N N N 15.194 22.579 13.963 -0.366 3.195  -1.623 N4  YT0 23 
YT0 N5  N5  N 0 1 N N N 19.668 24.019 15.091 -4.106 0.420  -0.322 N5  YT0 24 
YT0 N6  N6  N 0 1 N N N 22.006 24.641 13.529 -6.158 -0.440 1.454  N6  YT0 25 
YT0 N7  N7  N 0 1 Y N N 16.642 22.316 19.023 0.790  -0.012 0.166  N7  YT0 26 
YT0 S1  S1  S 0 1 Y N N 18.115 19.828 19.398 5.135  -0.971 -0.082 S1  YT0 27 
YT0 N8  N8  N 0 1 Y N N 18.749 18.406 20.036 6.712  -0.448 0.258  N8  YT0 28 
YT0 H1  H1  H 0 1 N N N 19.580 16.526 21.539 8.087  1.199  2.307  H1  YT0 29 
YT0 H2  H2  H 0 1 N N N 18.969 17.343 23.017 8.679  1.226  0.629  H2  YT0 30 
YT0 H3  H3  H 0 1 N N N 17.923 16.178 22.137 7.643  2.543  1.229  H3  YT0 31 
YT0 H4  H4  H 0 1 N N N 16.279 18.622 22.203 5.166  2.175  1.487  H4  YT0 32 
YT0 H5  H5  H 0 1 N N N 13.896 24.704 20.109 2.127  -3.204 -1.357 H5  YT0 33 
YT0 H6  H6  H 0 1 N N N 15.138 20.611 21.311 2.652  1.490  1.008  H6  YT0 34 
YT0 H7  H7  H 0 1 N N N 14.566 25.656 17.277 -0.874 -3.787 -0.661 H7  YT0 35 
YT0 H8  H8  H 0 1 N N N 14.868 26.454 18.858 -1.481 -2.575 -1.815 H8  YT0 36 
YT0 H9  H9  H 0 1 N N N 16.234 26.139 17.735 -0.116 -3.625 -2.264 H9  YT0 37 
YT0 H10 H10 H 0 1 N N N 18.226 21.730 16.818 -0.859 1.369  0.338  H10 YT0 38 
YT0 H11 H11 H 0 1 N N N 19.429 22.963 17.326 -2.104 0.594  1.407  H11 YT0 39 
YT0 H12 H12 H 0 1 N N N 18.050 21.547 14.694 -3.370 2.412  -2.126 H12 YT0 40 
YT0 H13 H13 H 0 1 N N N 18.244 22.817 13.439 -3.281 3.024  -0.457 H13 YT0 41 
YT0 H14 H14 H 0 1 N N N 18.880 25.768 14.217 -4.934 2.335  -0.062 H14 YT0 42 
YT0 H15 H15 H 0 1 N N N 19.364 24.484 13.058 -4.343 1.560  1.428  H15 YT0 43 
YT0 H16 H16 H 0 1 N N N 21.258 26.148 14.784 -6.813 1.555  1.376  H16 YT0 44 
YT0 H17 H17 H 0 1 N N N 20.951 26.385 13.030 -6.788 0.708  -0.190 H17 YT0 45 
YT0 H18 H18 H 0 1 N N N 24.082 24.506 13.203 -8.071 -1.103 0.891  H18 YT0 46 
YT0 H19 H19 H 0 1 N N N 23.317 26.033 12.646 -7.381 -1.915 2.317  H19 YT0 47 
YT0 H20 H20 H 0 1 N N N 23.574 25.744 14.401 -7.997 -0.250 2.452  H20 YT0 48 
YT0 H21 H21 H 0 1 N N N 22.733 22.820 14.259 -5.921 -1.579 -0.296 H21 YT0 49 
YT0 H22 H22 H 0 1 N N N 22.362 24.058 15.506 -5.331 -2.355 1.194  H22 YT0 50 
YT0 H23 H23 H 0 1 N N N 20.363 22.449 13.865 -3.476 -0.727 1.322  H23 YT0 51 
YT0 H24 H24 H 0 1 N N N 20.725 22.269 15.615 -3.451 -1.575 -0.244 H24 YT0 52 
YT0 H25 H25 H 0 1 N N N 17.645 25.585 16.240 -2.518 -0.704 -2.120 H25 YT0 53 
YT0 H26 H26 H 0 1 N N N 16.275 24.598 15.625 -1.141 0.479  -2.080 H26 YT0 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YT0 C16 N6  SING N N 1  
YT0 N6  C15 SING N N 2  
YT0 N6  C17 SING N N 3  
YT0 C15 C14 SING N N 4  
YT0 N4  C13 TRIP N N 5  
YT0 C14 N5  SING N N 6  
YT0 C13 C12 SING N N 7  
YT0 C12 C11 SING N N 8  
YT0 C17 C18 SING N N 9  
YT0 C18 N5  SING N N 10 
YT0 N5  C11 SING N N 11 
YT0 C11 C19 SING N N 12 
YT0 C11 C10 SING N N 13 
YT0 C19 N3  SING N N 14 
YT0 C10 N3  SING N N 15 
YT0 N3  C9  SING N N 16 
YT0 C8  C7  SING N N 17 
YT0 C9  C7  DOUB Y N 18 
YT0 C9  N7  SING Y N 19 
YT0 C7  C6  SING Y N 20 
YT0 N7  C5  DOUB Y N 21 
YT0 S1  N8  SING Y N 22 
YT0 S1  C4  SING Y N 23 
YT0 C6  N2  DOUB Y N 24 
YT0 C5  N2  SING Y N 25 
YT0 C5  N1  SING N N 26 
YT0 N8  C2  DOUB Y N 27 
YT0 C4  N1  SING N N 28 
YT0 C4  C3  DOUB Y N 29 
YT0 C2  C3  SING Y N 30 
YT0 C2  C1  SING N N 31 
YT0 C1  H1  SING N N 32 
YT0 C1  H2  SING N N 33 
YT0 C1  H3  SING N N 34 
YT0 C3  H4  SING N N 35 
YT0 C6  H5  SING N N 36 
YT0 N1  H6  SING N N 37 
YT0 C8  H7  SING N N 38 
YT0 C8  H8  SING N N 39 
YT0 C8  H9  SING N N 40 
YT0 C10 H10 SING N N 41 
YT0 C10 H11 SING N N 42 
YT0 C12 H12 SING N N 43 
YT0 C12 H13 SING N N 44 
YT0 C14 H14 SING N N 45 
YT0 C14 H15 SING N N 46 
YT0 C15 H16 SING N N 47 
YT0 C15 H17 SING N N 48 
YT0 C16 H18 SING N N 49 
YT0 C16 H19 SING N N 50 
YT0 C16 H20 SING N N 51 
YT0 C17 H21 SING N N 52 
YT0 C17 H22 SING N N 53 
YT0 C18 H23 SING N N 54 
YT0 C18 H24 SING N N 55 
YT0 C19 H25 SING N N 56 
YT0 C19 H26 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YT0 SMILES           ACDLabs              12.01 "Cc1cc(Nc2ncc(C)c(n2)N2CC(CC#N)(C2)N2CCN(C)CC2)sn1"                                                                                                   
YT0 InChI            InChI                1.06  "InChI=1S/C19H26N8S/c1-14-11-21-18(22-16-10-15(2)24-28-16)23-17(14)26-12-19(13-26,4-5-20)27-8-6-25(3)7-9-27/h10-11H,4,6-9,12-13H2,1-3H3,(H,21,22,23)" 
YT0 InChIKey         InChI                1.06  VGBYAYCYPVFDTM-UHFFFAOYSA-N                                                                                                                           
YT0 SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)C2(CC#N)CN(C2)c3nc(Nc4snc(C)c4)ncc3C"                                                                                                     
YT0 SMILES           CACTVS               3.385 "CN1CCN(CC1)C2(CC#N)CN(C2)c3nc(Nc4snc(C)c4)ncc3C"                                                                                                     
YT0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(sn1)Nc2ncc(c(n2)N3CC(C3)(CC#N)N4CCN(CC4)C)C"                                                                                                   
YT0 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(sn1)Nc2ncc(c(n2)N3CC(C3)(CC#N)N4CCN(CC4)C)C"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YT0 "SYSTEMATIC NAME" ACDLabs              12.01 "[1-{5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl}-3-(4-methylpiperazin-1-yl)azetidin-3-yl]acetonitrile"    
YT0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[1-[5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl]-3-(4-methylpiperazin-1-yl)azetidin-3-yl]ethanenitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YT0 "Create component" 2023-02-20 RCSB 
YT0 "Initial release"  2023-06-21 RCSB 
# 
