data_X70
# 
_chem_comp.id                                    X70 
_chem_comp.name                                  "(1R,2S,5S)-N-{(2S,3R)-4-(3,3-difluoroazetidin-1-yl)-3-hydroxy-4-oxo-1-[(3S)-2-oxopiperidin-3-yl]butan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H40 F5 N5 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        637.639 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X70 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8EZZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X70 N1  N1  N 0 1 N N N N N N -19.646 15.695 -26.603 -1.565 0.906  -0.315 N1  X70 1  
X70 N3  N2  N 0 1 N N N N N N -18.015 13.403 -24.403 1.924  0.386  -1.439 N3  X70 2  
X70 C4  C1  C 0 1 N N S N N N -20.791 17.064 -25.053 -0.855 3.103  0.320  C4  X70 3  
X70 C5  C2  C 0 1 N N N N N N -19.620 17.916 -24.644 -1.446 3.623  -0.992 C5  X70 4  
X70 C6  C3  C 0 1 N N N N N N -18.781 18.520 -25.750 -2.762 3.004  -1.467 C6  X70 5  
X70 C7  C4  C 0 1 N N N N N N -19.776 18.826 -23.434 -1.265 5.109  -1.306 C7  X70 6  
X70 C8  C5  C 0 1 N N N N N N -20.832 16.556 -26.473 -1.388 1.765  0.878  C8  X70 7  
X70 C10 C6  C 0 1 N N S N N N -19.987 15.358 -29.011 -3.620 -0.220 0.476  C10 X70 8  
X70 C13 C7  C 0 1 N N N N N N -21.404 13.364 -28.517 -1.914 -0.933 2.156  C13 X70 9  
X70 C15 C8  C 0 1 N N N N N N -19.424 17.181 -30.496 -6.051 -0.384 0.446  C15 X70 10 
X70 C17 C9  C 0 1 N N S N N N -18.081 12.034 -23.897 3.067  -0.417 -0.998 C17 X70 11 
X70 C20 C10 C 0 1 N N N N N N -20.350 11.931 -20.385 4.912  3.063  1.010  C20 X70 12 
X70 C21 C11 C 0 1 N N N N N N -21.278 10.750 -20.049 4.361  2.250  2.196  C21 X70 13 
X70 C22 C12 C 0 1 N N N N N N -20.039 9.844  -20.123 4.813  1.000  1.420  C22 X70 14 
X70 C24 C13 C 0 1 N N S N N N -17.513 10.981 -26.156 4.046  -2.715 -0.951 C24 X70 15 
X70 C26 C14 C 0 1 N N N N N N -18.975 9.783  -27.818 4.976  -5.019 -0.874 C26 X70 16 
X70 C28 C15 C 0 1 N N N N N N -16.374 10.323 -26.885 3.912  -2.860 0.538  C28 X70 17 
X70 C1  C16 C 0 1 N N N N N N -19.070 14.014 -24.941 0.827  0.481  -0.663 C1  X70 18 
X70 O1  O1  O 0 1 N N N N N N -20.105 13.412 -25.162 0.820  -0.022 0.440  O1  X70 19 
X70 C2  C17 C 0 1 N N S N N N -18.948 15.470 -25.345 -0.391 1.213  -1.166 C2  X70 20 
X70 N2  N3  N 0 1 N N N N N N -19.090 16.040 -29.931 -4.876 -0.591 -0.181 N2  X70 21 
X70 O2  O2  O 0 1 N N N N N N -20.438 17.815 -30.287 -6.069 0.109  1.554  O2  X70 22 
X70 C3  C18 C 0 1 N N R N N N -19.607 16.429 -24.359 -0.198 2.738  -1.028 C3  X70 23 
X70 O3  O3  O 0 1 N N N N N N -18.197 14.471 -27.749 -2.615 -0.535 -1.636 O3  X70 24 
X70 N4  N4  N 0 1 N N N N N N -19.377 10.929 -20.875 4.716  1.838  0.210  N4  X70 25 
X70 O4  O4  O 0 1 N N N N N N -18.682 13.244 -21.889 4.286  0.151  -3.006 O4  X70 26 
X70 N5  N5  N 0 1 N N N N N N -16.601 9.283  -27.680 4.114  -4.008 1.187  N5  X70 27 
X70 O5  O5  O 0 1 N N N N N N -17.735 9.872  -21.901 4.488  2.503  -1.895 O5  X70 28 
X70 O6  O6  O 0 1 N N N N N N -15.236 10.771 -26.713 3.603  -1.882 1.185  O6  X70 29 
X70 C9  C19 C 0 1 N N N N N N -19.198 15.140 -27.728 -2.565 0.038  -0.568 C9  X70 30 
X70 C11 C20 C 0 1 N N N N N N -20.577 14.052 -29.603 -3.166 -1.361 1.389  C11 X70 31 
X70 C12 C21 C 0 1 N N N N N N -21.483 14.406 -30.793 -4.282 -1.696 2.380  C12 X70 32 
X70 C14 C22 C 0 1 N N N N N N -19.475 13.094 -30.068 -2.849 -2.596 0.543  C14 X70 33 
X70 C16 C23 C 0 1 N N N N N N -18.422 17.711 -31.525 -7.343 -0.765 -0.229 C16 X70 34 
X70 C18 C24 C 0 1 N N R N N N -17.870 12.182 -22.377 4.356  0.168  -1.579 C18 X70 35 
X70 C19 C25 C 0 1 N N N N N N -18.322 10.910 -21.678 4.525  1.587  -1.101 C19 X70 36 
X70 C23 C26 C 0 1 N N N N N N -17.109 11.148 -24.683 2.896  -1.857 -1.483 C23 X70 37 
X70 C25 C27 C 0 1 N N N N N N -18.857 10.273 -26.389 4.001  -4.094 -1.613 C25 X70 38 
X70 C27 C28 C 0 1 N N N N N N -17.904 8.741  -28.044 4.442  -5.269 0.534  C27 X70 39 
X70 F1  F1  F 0 1 N N N N N N -17.214 17.275 -31.370 -7.470 -0.054 -1.428 F1  X70 40 
X70 F2  F2  F 0 1 N N N N N N -18.727 17.333 -32.759 -7.341 -2.138 -0.499 F2  X70 41 
X70 F3  F3  F 0 1 N N N N N N -18.253 19.003 -31.377 -8.418 -0.456 0.612  F3  X70 42 
X70 F4  F4  F 0 1 N N N N N N -21.865 10.768 -18.830 5.058  2.455  3.391  F4  X70 43 
X70 F5  F5  F 0 1 N N N N N N -22.243 10.473 -20.970 2.974  2.349  2.349  F5  X70 44 
X70 H1  H1  H 0 1 N N N N N N -17.148 13.899 -24.344 1.957  0.850  -2.291 H1  X70 45 
X70 H2  H2  H 0 1 N N N N N N -21.736 17.162 -24.499 -0.391 3.802  1.015  H2  X70 46 
X70 H3  H3  H 0 1 N N N N N N -17.966 19.114 -25.310 -3.558 3.746  -1.398 H3  X70 47 
X70 H4  H4  H 0 1 N N N N N N -18.356 17.716 -26.369 -2.658 2.679  -2.502 H4  X70 48 
X70 H5  H5  H 0 1 N N N N N N -19.411 19.169 -26.375 -3.008 2.148  -0.839 H5  X70 49 
X70 H6  H6  H 0 1 N N N N N N -20.394 18.325 -22.675 -0.586 5.554  -0.579 H6  X70 50 
X70 H7  H7  H 0 1 N N N N N N -18.785 19.048 -23.012 -0.850 5.221  -2.308 H7  X70 51 
X70 H8  H8  H 0 1 N N N N N N -20.262 19.764 -23.741 -2.231 5.611  -1.255 H8  X70 52 
X70 H9  H9  H 0 1 N N N N N N -20.782 17.393 -27.185 -2.342 1.917  1.382  H9  X70 53 
X70 H10 H10 H 0 1 N N N N N N -21.751 15.978 -26.651 -0.662 1.323  1.561  H10 X70 54 
X70 H11 H11 H 0 1 N N N N N N -20.829 16.026 -28.779 -3.773 0.681  1.069  H11 X70 55 
X70 H12 H12 H 0 1 N N N N N N -20.755 13.111 -27.666 -2.158 -0.098 2.814  H12 X70 56 
X70 H13 H13 H 0 1 N N N N N N -22.203 14.041 -28.180 -1.548 -1.769 2.751  H13 X70 57 
X70 H14 H14 H 0 1 N N N N N N -21.850 12.444 -28.923 -1.143 -0.625 1.450  H14 X70 58 
X70 H15 H15 H 0 1 N N N N N N -19.097 11.646 -24.058 3.121  -0.404 0.091  H15 X70 59 
X70 H16 H16 H 0 1 N N N N N N -20.012 12.513 -19.515 4.272  3.891  0.709  H16 X70 60 
X70 H17 H17 H 0 1 N N N N N N -20.735 12.614 -21.156 5.957  3.352  1.124  H17 X70 61 
X70 H18 H18 H 0 1 N N N N N N -20.184 8.913  -20.691 5.829  0.682  1.654  H18 X70 62 
X70 H19 H19 H 0 1 N N N N N N -19.580 9.613  -19.150 4.094  0.181  1.449  H19 X70 63 
X70 H20 H20 H 0 1 N N N N N N -17.616 11.995 -26.570 4.995  -2.233 -1.183 H20 X70 64 
X70 H21 H21 H 0 1 N N N N N N -18.832 10.623 -28.514 5.057  -5.966 -1.407 H21 X70 65 
X70 H22 H22 H 0 1 N N N N N N -19.968 9.339  -27.980 5.957  -4.546 -0.818 H22 X70 66 
X70 H23 H23 H 0 1 N N N N N N -17.885 15.732 -25.449 -0.593 0.946  -2.203 H23 X70 67 
X70 H24 H24 H 0 1 N N N N N N -18.200 15.633 -30.139 -4.862 -0.985 -1.067 H24 X70 68 
X70 H25 H25 H 0 1 N N N N N N -19.729 16.097 -23.317 0.756  3.166  -1.336 H25 X70 69 
X70 H26 H26 H 0 1 N N N N N N -18.553 13.337 -20.952 3.551  0.664  -3.369 H26 X70 70 
X70 H27 H27 H 0 1 N N N N N N -15.799 8.827  -28.067 4.037  -4.003 2.154  H27 X70 71 
X70 H28 H28 H 0 1 N N N N N N -22.274 15.094 -30.460 -5.174 -2.001 1.834  H28 X70 72 
X70 H29 H29 H 0 1 N N N N N N -20.884 14.889 -31.579 -3.959 -2.508 3.031  H29 X70 73 
X70 H30 H30 H 0 1 N N N N N N -21.939 13.488 -31.192 -4.509 -0.816 2.983  H30 X70 74 
X70 H31 H31 H 0 1 N N N N N N -18.826 12.840 -29.217 -2.053 -2.357 -0.164 H31 X70 75 
X70 H32 H32 H 0 1 N N N N N N -19.932 12.176 -30.467 -2.525 -3.408 1.193  H32 X70 76 
X70 H33 H33 H 0 1 N N N N N N -18.876 13.578 -30.854 -3.741 -2.901 -0.004 H33 X70 77 
X70 H34 H34 H 0 1 N N N N N N -16.806 12.365 -22.169 5.207  -0.430 -1.250 H34 X70 78 
X70 H35 H35 H 0 1 N N N N N N -17.080 10.154 -24.212 1.949  -2.254 -1.119 H35 X70 79 
X70 H36 H36 H 0 1 N N N N N N -16.108 11.603 -24.643 2.903  -1.877 -2.573 H36 X70 80 
X70 H37 H37 H 0 1 N N N N N N -19.675 10.979 -26.182 2.991  -4.500 -1.550 H37 X70 81 
X70 H38 H38 H 0 1 N N N N N N -18.933 9.413  -25.707 4.297  -4.008 -2.658 H38 X70 82 
X70 H39 H39 H 0 1 N N N N N N -18.118 7.858  -27.424 3.546  -5.888 0.475  H39 X70 83 
X70 H40 H40 H 0 1 N N N N N N -17.895 8.451  -29.105 5.199  -5.791 1.119  H40 X70 84 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X70 F2  C16 SING N N 1  
X70 C16 F3  SING N N 2  
X70 C16 F1  SING N N 3  
X70 C16 C15 SING N N 4  
X70 C12 C11 SING N N 5  
X70 C15 O2  DOUB N N 6  
X70 C15 N2  SING N N 7  
X70 C14 C11 SING N N 8  
X70 N2  C10 SING N N 9  
X70 C11 C10 SING N N 10 
X70 C11 C13 SING N N 11 
X70 C10 C9  SING N N 12 
X70 C27 C26 SING N N 13 
X70 C27 N5  SING N N 14 
X70 C26 C25 SING N N 15 
X70 O3  C9  DOUB N N 16 
X70 C9  N1  SING N N 17 
X70 N5  C28 SING N N 18 
X70 C28 O6  DOUB N N 19 
X70 C28 C24 SING N N 20 
X70 N1  C8  SING N N 21 
X70 N1  C2  SING N N 22 
X70 C8  C4  SING N N 23 
X70 C25 C24 SING N N 24 
X70 C24 C23 SING N N 25 
X70 C6  C5  SING N N 26 
X70 C2  C1  SING N N 27 
X70 C2  C3  SING N N 28 
X70 O1  C1  DOUB N N 29 
X70 C4  C5  SING N N 30 
X70 C4  C3  SING N N 31 
X70 C1  N3  SING N N 32 
X70 C23 C17 SING N N 33 
X70 C5  C3  SING N N 34 
X70 C5  C7  SING N N 35 
X70 N3  C17 SING N N 36 
X70 C17 C18 SING N N 37 
X70 C18 O4  SING N N 38 
X70 C18 C19 SING N N 39 
X70 O5  C19 DOUB N N 40 
X70 C19 N4  SING N N 41 
X70 F5  C21 SING N N 42 
X70 N4  C20 SING N N 43 
X70 N4  C22 SING N N 44 
X70 C20 C21 SING N N 45 
X70 C22 C21 SING N N 46 
X70 C21 F4  SING N N 47 
X70 N3  H1  SING N N 48 
X70 C4  H2  SING N N 49 
X70 C6  H3  SING N N 50 
X70 C6  H4  SING N N 51 
X70 C6  H5  SING N N 52 
X70 C7  H6  SING N N 53 
X70 C7  H7  SING N N 54 
X70 C7  H8  SING N N 55 
X70 C8  H9  SING N N 56 
X70 C8  H10 SING N N 57 
X70 C10 H11 SING N N 58 
X70 C13 H12 SING N N 59 
X70 C13 H13 SING N N 60 
X70 C13 H14 SING N N 61 
X70 C17 H15 SING N N 62 
X70 C20 H16 SING N N 63 
X70 C20 H17 SING N N 64 
X70 C22 H18 SING N N 65 
X70 C22 H19 SING N N 66 
X70 C24 H20 SING N N 67 
X70 C26 H21 SING N N 68 
X70 C26 H22 SING N N 69 
X70 C2  H23 SING N N 70 
X70 N2  H24 SING N N 71 
X70 C3  H25 SING N N 72 
X70 O4  H26 SING N N 73 
X70 N5  H27 SING N N 74 
X70 C12 H28 SING N N 75 
X70 C12 H29 SING N N 76 
X70 C12 H30 SING N N 77 
X70 C14 H31 SING N N 78 
X70 C14 H32 SING N N 79 
X70 C14 H33 SING N N 80 
X70 C18 H34 SING N N 81 
X70 C23 H35 SING N N 82 
X70 C23 H36 SING N N 83 
X70 C25 H37 SING N N 84 
X70 C25 H38 SING N N 85 
X70 C27 H39 SING N N 86 
X70 C27 H40 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X70 SMILES           ACDLabs              12.01 "CC1(C)C2C(C(=O)NC(CC3CCCNC3=O)C(O)C(=O)N3CC(F)(F)C3)N(CC21)C(=O)C(NC(=O)C(F)(F)F)C(C)(C)C"                                                                                                                                                            
X70 InChI            InChI                1.06  "InChI=1S/C28H40F5N5O6/c1-25(2,3)19(36-24(44)28(31,32)33)23(43)38-10-14-16(26(14,4)5)17(38)21(41)35-15(9-13-7-6-8-34-20(13)40)18(39)22(42)37-11-27(29,30)12-37/h13-19,39H,6-12H2,1-5H3,(H,34,40)(H,35,41)(H,36,44)/t13-,14-,15-,16-,17-,18+,19+/m0/s1" 
X70 InChIKey         InChI                1.06  GUMSXYQAJLBYRA-UYYZUGKPSA-N                                                                                                                                                                                                                            
X70 SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)[C@H](NC(=O)C(F)(F)F)C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCCNC3=O)[C@@H](O)C(=O)N4CC(F)(F)C4)C2(C)C"                                                                                                                              
X70 SMILES           CACTVS               3.385 "CC(C)(C)[CH](NC(=O)C(F)(F)F)C(=O)N1C[CH]2[CH]([CH]1C(=O)N[CH](C[CH]3CCCNC3=O)[CH](O)C(=O)N4CC(F)(F)C4)C2(C)C"                                                                                                                                         
X70 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)[C@H](C(C)(C)C)NC(=O)C(F)(F)F)C(=O)N[C@@H](C[C@@H]3CCCNC3=O)[C@H](C(=O)N4CC(C4)(F)F)O)C"                                                                                                                             
X70 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)C(F)(F)F)C(=O)NC(CC3CCCNC3=O)C(C(=O)N4CC(C4)(F)F)O)C"                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X70 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S,5S)-N-{(2S,3R)-4-(3,3-difluoroazetidin-1-yl)-3-hydroxy-4-oxo-1-[(3S)-2-oxopiperidin-3-yl]butan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide"                                                                                
X70 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-~{N}-[(2~{S},3~{R})-4-[3,3-bis(fluoranyl)azetidin-1-yl]-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepiperidin-3-yl]butan-2-yl]-3-[(2~{S})-3,3-dimethyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]butanoyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X70 "Create component" 2022-11-02 RCSB 
X70 "Initial release"  2023-10-11 RCSB 
X70 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            X70 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C18 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
