data_X30
# 
_chem_comp.id                                    X30 
_chem_comp.name                                  "11-ethyl-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H40 N8 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-15 
_chem_comp.pdbx_modified_date                    2018-06-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        584.712 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X30 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5W55 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X30 N    N1  N 0 1 N N N 13.383 -4.764  3.550  8.569  3.511  -0.582 N    X30 1  
X30 C    C1  C 0 1 N N N 12.645 -5.468  4.606  9.442  4.347  -1.417 C    X30 2  
X30 O    O1  O 0 1 N N N 19.486 -5.687  -2.235 4.048  -3.910 1.006  O    X30 3  
X30 C1   C2  C 0 1 N N N 12.950 -5.256  2.237  9.109  2.150  -0.454 C1   X30 4  
X30 C10  C3  C 0 1 N N N 18.368 -5.414  -2.629 3.518  -2.816 0.968  C10  X30 5  
X30 C11  C4  C 0 1 Y N N 17.842 -6.111  -3.858 2.091  -2.699 0.612  C11  X30 6  
X30 C12  C5  C 0 1 Y N N 17.498 -5.383  -4.989 1.521  -3.594 -0.298 C12  X30 7  
X30 C13  C6  C 0 1 Y N N 17.020 -6.042  -6.113 0.184  -3.485 -0.624 C13  X30 8  
X30 C14  C7  C 0 1 Y N N 16.899 -7.512  -6.105 -0.595 -2.481 -0.045 C14  X30 9  
X30 C15  C8  C 0 1 Y N N 17.246 -8.201  -4.954 -0.027 -1.592 0.859  C15  X30 10 
X30 C16  C9  C 0 1 Y N N 17.721 -7.499  -3.847 1.306  -1.697 1.188  C16  X30 11 
X30 C17  C10 C 0 1 Y N N 15.814 -9.290  -7.300 -2.556 -1.126 -0.391 C17  X30 12 
X30 C18  C11 C 0 1 Y N N 14.531 -10.676 -8.686 -2.359 1.166  -0.238 C18  X30 13 
X30 C19  C12 C 0 1 Y N N 14.553 -11.681 -7.735 -3.726 1.292  -0.450 C19  X30 14 
X30 C2   C13 C 0 1 N N N 13.703 -4.511  1.144  8.215  1.336  0.485  C2   X30 15 
X30 C20  C14 C 0 1 Y N N 15.251 -11.396 -6.458 -4.478 0.127  -0.609 C20  X30 16 
X30 C21  C15 C 0 1 Y N N 15.889 -13.576 -5.722 -6.614 0.740  0.288  C21  X30 17 
X30 C22  C16 C 0 1 Y N N 16.979 -14.010 -4.990 -7.568 -0.033 0.937  C22  X30 18 
X30 C23  C17 C 0 1 Y N N 17.557 -15.239 -5.262 -8.298 0.502  1.980  C23  X30 19 
X30 C24  C18 C 0 1 Y N N 17.059 -16.052 -6.269 -8.082 1.807  2.387  C24  X30 20 
X30 C25  C19 C 0 1 Y N N 15.972 -15.657 -7.032 -7.148 2.592  1.746  C25  X30 21 
X30 C26  C20 C 0 1 Y N N 15.365 -14.434 -6.806 -6.412 2.070  0.677  C26  X30 22 
X30 C27  C21 C 0 1 N N N 14.184 -14.080 -7.650 -5.472 2.936  -0.055 C27  X30 23 
X30 C28  C22 C 0 1 N N N 12.622 -12.633 -8.777 -3.523 3.580  -1.250 C28  X30 24 
X30 C29  C23 C 0 1 N N N 14.989 -12.018 -4.059 -6.512 -0.324 -1.949 C29  X30 25 
X30 C3   C24 C 0 1 N N N 15.591 -4.265  2.603  6.306  2.670  -0.175 C3   X30 26 
X30 C30  C25 C 0 1 N N N 16.165 -4.039  -7.180 0.483  -5.355 -2.063 C30  X30 27 
X30 C31  C26 C 0 1 N N N 14.539 -10.585 -3.933 -6.855 -1.803 -1.756 C31  X30 28 
X30 C4   C27 C 0 1 N N N 14.825 -4.981  3.712  7.200  3.484  -1.114 C4   X30 29 
X30 C5   C28 C 0 1 N N N 15.873 -4.102  0.195  5.973  0.473  0.788  C5   X30 30 
X30 C6   C29 C 0 1 N N N 17.375 -4.292  0.378  4.558  0.470  0.203  C6   X30 31 
X30 C7   C30 C 0 1 N N N 18.158 -3.796  -0.831 3.643  -0.374 1.095  C7   X30 32 
X30 C8   C31 C 0 1 N N N 16.259 -4.207  -2.302 5.623  -1.817 1.720  C8   X30 33 
X30 C9   C32 C 0 1 N N N 15.423 -4.707  -1.132 6.516  -0.957 0.821  C9   X30 34 
X30 N1   N2  N 0 1 N N N 15.142 -4.753  1.292  6.846  1.309  -0.047 N1   X30 35 
X30 N2   N3  N 0 1 N N N 17.633 -4.526  -1.972 4.235  -1.710 1.251  N2   X30 36 
X30 N3   N4  N 0 1 N N N 16.374 -8.069  -7.217 -1.945 -2.371 -0.376 N3   X30 37 
X30 N4   N5  N 0 1 Y N N 15.153 -9.527  -8.450 -1.817 -0.042 -0.214 N4   X30 38 
X30 N5   N6  N 0 1 Y N N 15.860 -10.201 -6.310 -3.865 -1.051 -0.588 N5   X30 39 
X30 N6   N7  N 0 1 N N N 15.347 -12.333 -5.431 -5.859 0.187  -0.741 N6   X30 40 
X30 N7   N8  N 0 1 N N N 13.846 -12.855 -8.025 -4.299 2.559  -0.542 N7   X30 41 
X30 O1   O2  O 0 1 N N N 13.479 -15.007 -7.997 -5.802 4.094  -0.227 O1   X30 42 
X30 O2   O3  O 0 1 N N N 16.661 -5.374  -7.247 -0.373 -4.354 -1.509 O2   X30 43 
X30 H2   H2  H 0 1 N N N 12.970 -5.099  5.590  9.056  5.366  -1.440 H2   X30 44 
X30 H1   H3  H 0 1 N N N 11.567 -5.286  4.484  10.450 4.349  -1.001 H1   X30 45 
X30 H    H4  H 0 1 N N N 12.845 -6.547  4.535  9.469  3.945  -2.430 H    X30 46 
X30 H4   H5  H 0 1 N N N 11.870 -5.086  2.120  9.133  1.675  -1.435 H4   X30 47 
X30 H3   H6  H 0 1 N N N 13.162 -6.333  2.160  10.119 2.196  -0.047 H3   X30 48 
X30 H20  H7  H 0 1 N N N 17.602 -4.308  -4.994 2.125  -4.369 -0.745 H20  X30 49 
X30 H21  H8  H 0 1 N N N 17.149 -9.276  -4.915 -0.633 -0.817 1.305  H21  X30 50 
X30 H22  H9  H 0 1 N N N 18.002 -8.045  -2.959 1.744  -1.007 1.894  H22  X30 51 
X30 H24  H10 H 0 1 N N N 14.008 -10.826 -9.619 -1.746 2.044  -0.094 H24  X30 52 
X30 H5   H11 H 0 1 N N N 13.502 -3.433  1.229  8.597  0.318  0.558  H5   X30 53 
X30 H6   H12 H 0 1 N N N 13.370 -4.870  0.159  8.212  1.796  1.473  H6   X30 54 
X30 H25  H13 H 0 1 N N N 17.381 -13.389 -4.204 -7.740 -1.052 0.624  H25  X30 55 
X30 H26  H14 H 0 1 N N N 18.407 -15.568 -4.682 -9.042 -0.102 2.480  H26  X30 56 
X30 H27  H15 H 0 1 N N N 17.525 -17.007 -6.461 -8.649 2.214  3.212  H27  X30 57 
X30 H28  H16 H 0 1 N N N 15.596 -16.308 -7.808 -6.984 3.609  2.069  H28  X30 58 
X30 H30  H17 H 0 1 N N N 12.126 -13.597 -8.965 -3.783 3.565  -2.308 H30  X30 59 
X30 H31  H18 H 0 1 N N N 11.950 -11.982 -8.199 -3.750 4.562  -0.834 H31  X30 60 
X30 H29  H19 H 0 1 N N N 12.863 -12.152 -9.736 -2.459 3.374  -1.134 H29  X30 61 
X30 H32  H20 H 0 1 N N N 14.172 -12.681 -3.739 -5.839 -0.215 -2.800 H32  X30 62 
X30 H33  H21 H 0 1 N N N 15.865 -12.178 -3.413 -7.426 0.240  -2.134 H33  X30 63 
X30 H8   H22 H 0 1 N N N 16.667 -4.462  2.717  6.282  3.145  0.806  H8   X30 64 
X30 H7   H23 H 0 1 N N N 15.407 -3.183  2.672  5.297  2.625  -0.583 H7   X30 65 
X30 H36  H24 H 0 1 N N N 15.934 -3.682  -8.194 1.303  -4.876 -2.599 H36  X30 66 
X30 H35  H25 H 0 1 N N N 15.252 -4.018  -6.567 0.886  -5.973 -1.260 H35  X30 67 
X30 H37  H26 H 0 1 N N N 16.926 -3.387  -6.726 -0.086 -5.980 -2.751 H37  X30 68 
X30 H311 H27 H 0 0 N N N 14.275 -10.374 -2.886 -7.528 -1.912 -0.906 H311 X30 69 
X30 H313 H28 H 0 0 N N N 15.354 -9.916  -4.247 -7.341 -2.183 -2.655 H313 X30 70 
X30 H312 H29 H 0 0 N N N 13.660 -10.419 -4.574 -5.941 -2.366 -1.571 H312 X30 71 
X30 H9   H30 H 0 1 N N N 15.038 -6.059  3.664  6.818  4.502  -1.188 H9   X30 72 
X30 H10  H31 H 0 1 N N N 15.145 -4.587  4.688  7.203  3.024  -2.103 H10  X30 73 
X30 H11  H32 H 0 1 N N N 15.648 -3.025  0.189  5.946  0.875  1.801  H11  X30 74 
X30 H13  H33 H 0 1 N N N 17.584 -5.362  0.523  4.181  1.492  0.158  H13  X30 75 
X30 H12  H34 H 0 1 N N N 17.699 -3.731  1.267  4.581  0.046  -0.801 H12  X30 76 
X30 H15  H35 H 0 1 N N N 19.231 -4.004  -0.704 3.548  0.099  2.073  H15  X30 77 
X30 H14  H36 H 0 1 N N N 18.008 -2.715  -0.967 2.660  -0.459 0.633  H14  X30 78 
X30 H17  H37 H 0 1 N N N 16.137 -3.121  -2.423 5.947  -2.857 1.670  H17  X30 79 
X30 H16  H38 H 0 1 N N N 15.960 -4.715  -3.231 5.689  -1.462 2.749  H16  X30 80 
X30 H18  H39 H 0 1 N N N 14.371 -4.437  -1.307 6.520  -1.368 -0.188 H18  X30 81 
X30 H19  H40 H 0 1 N N N 15.515 -5.801  -1.072 7.532  -0.951 1.216  H19  X30 82 
X30 H23  H42 H 0 1 N N N 16.404 -7.525  -8.055 -2.457 -3.165 -0.595 H23  X30 83 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X30 C28 N7   SING N N 1  
X30 C18 N4   DOUB Y N 2  
X30 C18 C19  SING Y N 3  
X30 N4  C17  SING Y N 4  
X30 N7  C19  SING N N 5  
X30 N7  C27  SING N N 6  
X30 O1  C27  DOUB N N 7  
X30 C19 C20  DOUB Y N 8  
X30 C27 C26  SING N N 9  
X30 C17 N3   SING N N 10 
X30 C17 N5   DOUB Y N 11 
X30 O2  C30  SING N N 12 
X30 O2  C13  SING N N 13 
X30 N3  C14  SING N N 14 
X30 C25 C26  DOUB Y N 15 
X30 C25 C24  SING Y N 16 
X30 C26 C21  SING Y N 17 
X30 C20 N5   SING Y N 18 
X30 C20 N6   SING N N 19 
X30 C24 C23  DOUB Y N 20 
X30 C13 C14  DOUB Y N 21 
X30 C13 C12  SING Y N 22 
X30 C14 C15  SING Y N 23 
X30 C21 N6   SING N N 24 
X30 C21 C22  DOUB Y N 25 
X30 N6  C29  SING N N 26 
X30 C23 C22  SING Y N 27 
X30 C12 C11  DOUB Y N 28 
X30 C15 C16  DOUB Y N 29 
X30 C29 C31  SING N N 30 
X30 C11 C16  SING Y N 31 
X30 C11 C10  SING N N 32 
X30 C10 O    DOUB N N 33 
X30 C10 N2   SING N N 34 
X30 C8  N2   SING N N 35 
X30 C8  C9   SING N N 36 
X30 N2  C7   SING N N 37 
X30 C9  C5   SING N N 38 
X30 C7  C6   SING N N 39 
X30 C5  C6   SING N N 40 
X30 C5  N1   SING N N 41 
X30 C2  N1   SING N N 42 
X30 C2  C1   SING N N 43 
X30 N1  C3   SING N N 44 
X30 C1  N    SING N N 45 
X30 C3  C4   SING N N 46 
X30 N   C4   SING N N 47 
X30 N   C    SING N N 48 
X30 C   H2   SING N N 49 
X30 C   H1   SING N N 50 
X30 C   H    SING N N 51 
X30 C1  H4   SING N N 52 
X30 C1  H3   SING N N 53 
X30 C12 H20  SING N N 54 
X30 C15 H21  SING N N 55 
X30 C16 H22  SING N N 56 
X30 C18 H24  SING N N 57 
X30 C2  H5   SING N N 58 
X30 C2  H6   SING N N 59 
X30 C22 H25  SING N N 60 
X30 C23 H26  SING N N 61 
X30 C24 H27  SING N N 62 
X30 C25 H28  SING N N 63 
X30 C28 H30  SING N N 64 
X30 C28 H31  SING N N 65 
X30 C28 H29  SING N N 66 
X30 C29 H32  SING N N 67 
X30 C29 H33  SING N N 68 
X30 C3  H8   SING N N 69 
X30 C3  H7   SING N N 70 
X30 C30 H36  SING N N 71 
X30 C30 H35  SING N N 72 
X30 C30 H37  SING N N 73 
X30 C31 H311 SING N N 74 
X30 C31 H313 SING N N 75 
X30 C31 H312 SING N N 76 
X30 C4  H9   SING N N 77 
X30 C4  H10  SING N N 78 
X30 C5  H11  SING N N 79 
X30 C6  H13  SING N N 80 
X30 C6  H12  SING N N 81 
X30 C7  H15  SING N N 82 
X30 C7  H14  SING N N 83 
X30 C8  H17  SING N N 84 
X30 C8  H16  SING N N 85 
X30 C9  H18  SING N N 86 
X30 C9  H19  SING N N 87 
X30 N3  H23  SING N N 88 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X30 SMILES           ACDLabs              12.01 "N1(CCN(CC1)C6CCN(C(=O)c2ccc(c(c2)OC)Nc3nc4c(cn3)N(C(c5c(N4CC)cccc5)=O)C)CC6)C"                                                                                                                               
X30 InChI            InChI                1.03  "InChI=1S/C32H40N8O3/c1-5-40-26-9-7-6-8-24(26)31(42)37(3)27-21-33-32(35-29(27)40)34-25-11-10-22(20-28(25)43-4)30(41)39-14-12-23(13-15-39)38-18-16-36(2)17-19-38/h6-11,20-21,23H,5,12-19H2,1-4H3,(H,33,34,35)" 
X30 InChIKey         InChI                1.03  GKFWANXSNUUAGB-UHFFFAOYSA-N                                                                                                                                                                                   
X30 SMILES_CANONICAL CACTVS               3.385 "CCN1c2ccccc2C(=O)N(C)c3cnc(Nc4ccc(cc4OC)C(=O)N5CCC(CC5)N6CCN(C)CC6)nc13"                                                                                                                                     
X30 SMILES           CACTVS               3.385 "CCN1c2ccccc2C(=O)N(C)c3cnc(Nc4ccc(cc4OC)C(=O)N5CCC(CC5)N6CCN(C)CC6)nc13"                                                                                                                                     
X30 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCN1c2ccccc2C(=O)N(c3c1nc(nc3)Nc4ccc(cc4OC)C(=O)N5CCC(CC5)N6CCN(CC6)C)C"                                                                                                                                     
X30 SMILES           "OpenEye OEToolkits" 2.0.6 "CCN1c2ccccc2C(=O)N(c3c1nc(nc3)Nc4ccc(cc4OC)C(=O)N5CCC(CC5)N6CCN(CC6)C)C"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X30 "SYSTEMATIC NAME" ACDLabs              12.01 "11-ethyl-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one" 
X30 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "11-ethyl-2-[[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl-phenyl]amino]-5-methyl-pyrimido[4,5-b][1,4]benzodiazepin-6-one"               
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X30 "Create component" 2017-06-15 RCSB 
X30 "Initial release"  2018-06-20 RCSB 
# 
