data_N40
# 
_chem_comp.id                                    N40 
_chem_comp.name                                  "3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-(octylsulfonyl)-L-alaninamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H45 N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "3-cyclohexyl-N~2~-(octylsulfonyl)-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide (bound form)" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        487.696 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N40 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5T6G 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N40 C03 C1  C 0 1 N N N N N N 9.619  7.859  -8.846  -1.104  -1.667 -0.779 C03 N40 1  
N40 C04 C2  C 0 1 N N N N N N 9.090  6.860  -9.870  -2.366  -2.372 -0.276 C04 N40 2  
N40 C05 C3  C 0 1 N N N N N N 7.604  7.026  -10.148 -3.567  -1.437 -0.431 C05 N40 3  
N40 C06 C4  C 0 1 N N N N N N 6.856  5.702  -10.289 -4.829  -2.142 0.071  C06 N40 4  
N40 C07 C5  C 0 1 N N N N N N 5.397  5.922  -10.724 -6.031  -1.207 -0.084 C07 N40 5  
N40 C08 C6  C 0 1 N N N N N N 4.521  4.679  -10.600 -7.293  -1.911 0.418  C08 N40 6  
N40 C09 C7  C 0 1 N N N N N N 3.224  4.836  -11.380 -8.494  -0.977 0.263  C09 N40 7  
N40 C10 C8  C 0 1 N N N N N N 2.167  3.807  -10.999 -9.756  -1.681 0.765  C10 N40 8  
N40 C12 C9  C 0 1 N N S N N N 9.599  11.907 -8.572  2.006   -0.663 -0.493 C12 N40 9  
N40 C13 C10 C 0 1 N N N N N N 9.469  12.717 -7.296  3.532   -0.543 -0.516 C13 N40 10 
N40 C14 C11 C 0 1 N N N N N N 8.550  12.087 -6.265  4.146   -1.693 0.284  C14 N40 11 
N40 C15 C12 C 0 1 N N N N N N 7.142  12.010 -6.852  3.756   -1.554 1.757  C15 N40 12 
N40 C16 C13 C 0 1 N N N N N N 6.090  11.633 -5.805  4.371   -2.704 2.558  C16 N40 13 
N40 C17 C14 C 0 1 N N N N N N 6.186  12.502 -4.550  5.894   -2.660 2.427  C17 N40 14 
N40 C18 C15 C 0 1 N N N N N N 7.594  12.531 -3.967  6.284   -2.799 0.954  C18 N40 15 
N40 C19 C16 C 0 1 N N N N N N 8.628  12.955 -5.001  5.669   -1.649 0.153  C19 N40 16 
N40 C20 C17 C 0 1 N N N N N N 10.380 12.742 -9.572  1.399   0.519  -1.203 C20 N40 17 
N40 C22 C18 C 0 1 N N S N N N 10.261 14.393 -11.447 1.043   2.918  -1.445 C22 N40 18 
N40 C23 C19 C 0 1 N N N N N N 9.827  13.886 -12.831 0.835   4.060  -0.449 C23 N40 19 
N40 C24 C20 C 0 1 N N S N N N 10.137 12.411 -13.115 -0.179  3.631  0.614  C24 N40 20 
N40 C25 C21 C 0 1 N N N N N N 9.952  12.104 -14.536 -0.392  4.739  1.621  C25 N40 21 
N40 C27 C22 C 0 1 N N N N N N 11.934 10.946 -13.830 -2.508  3.942  1.093  C27 N40 22 
N40 C28 C23 C 0 1 N N N N N N 11.573 12.041 -12.788 -1.574  3.424  -0.022 C28 N40 23 
N40 C30 C24 C 0 1 N N N N N N 9.872  15.865 -11.311 1.982   3.380  -2.562 C30 N40 24 
N40 N11 N1  N 0 1 N N N N N N 10.233 10.626 -8.342  1.603   -1.898 -1.169 N11 N40 25 
N40 N21 N2  N 0 1 N N N N N N 9.594  13.584 -10.453 1.634   1.769  -0.755 N21 N40 26 
N40 N26 N3  N 0 1 N N N N N N 11.075 11.181 -14.961 -1.704  4.895  1.867  N26 N40 27 
N40 O01 O1  O 0 1 N N N N N N 9.318  9.930  -10.670 0.621   -2.978 0.779  O01 N40 28 
N40 O29 O2  O 0 1 N N N N N N 9.069  12.522 -15.215 0.493   5.392  2.133  O29 N40 29 
N40 O31 O3  O 0 1 N N N N N N 10.371 16.349 -10.107 3.198   3.866  -1.990 O31 N40 30 
N40 O32 O4  O 0 1 N N N N N N 11.561 12.705 -9.629  0.698   0.347  -2.178 O32 N40 31 
N40 O33 O5  O 0 1 N N N N N N 11.430 9.273  -10.183 0.218   -3.873 -1.491 O33 N40 32 
N40 S02 S1  S 0 1 N N N N N N 10.137 9.444  -9.561  0.321   -2.775 -0.595 S02 N40 33 
N40 H1  H1  H 0 1 N N N N N N 8.824  8.054  -8.111  -1.227  -1.406 -1.829 H1  N40 34 
N40 H2  H2  H 0 1 N N N N N N 10.485 7.409  -8.339  -0.937  -0.762 -0.196 H2  N40 35 
N40 H3  H3  H 0 1 N N N N N N 9.264  5.843  -9.490  -2.533  -3.278 -0.859 H3  N40 36 
N40 H4  H4  H 0 1 N N N N N N 9.641  6.999  -10.812 -2.242  -2.633 0.775  H4  N40 37 
N40 H5  H5  H 0 1 N N N N N N 7.487  7.593  -11.083 -3.400  -0.531 0.151  H5  N40 38 
N40 H6  H6  H 0 1 N N N N N N 7.156  7.592  -9.318  -3.691  -1.176 -1.482 H6  N40 39 
N40 H7  H7  H 0 1 N N N N N N 6.865  5.181  -9.320  -4.996  -3.047 -0.512 H7  N40 40 
N40 H8  H8  H 0 1 N N N N N N 7.364  5.083  -11.043 -4.706  -2.403 1.122  H8  N40 41 
N40 H9  H9  H 0 1 N N N N N N 5.394  6.244  -11.776 -5.864  -0.301 0.499  H9  N40 42 
N40 H10 H10 H 0 1 N N N N N N 4.964  6.715  -10.096 -6.154  -0.946 -1.135 H10 N40 43 
N40 H11 H11 H 0 1 N N N N N N 4.283  4.513  -9.539  -7.459  -2.817 -0.165 H11 N40 44 
N40 H12 H12 H 0 1 N N N N N N 5.072  3.812  -10.992 -7.169  -2.173 1.469  H12 N40 45 
N40 H13 H13 H 0 1 N N N N N N 3.446  4.729  -12.452 -8.328  -0.071 0.846  H13 N40 46 
N40 H14 H14 H 0 1 N N N N N N 2.820  5.841  -11.187 -8.618  -0.715 -0.788 H14 N40 47 
N40 H15 H15 H 0 1 N N N N N N 1.259  3.975  -11.596 -10.612 -1.015 0.655  H15 N40 48 
N40 H16 H16 H 0 1 N N N N N N 2.553  2.796  -11.195 -9.923  -2.587 0.182  H16 N40 49 
N40 H17 H17 H 0 1 N N N N N N 1.927  3.907  -9.930  -9.633  -1.943 1.816  H17 N40 50 
N40 H18 H18 H 0 1 N N N N N N 8.590  11.741 -8.978  1.659   -0.684 0.540  H18 N40 51 
N40 H19 H19 H 0 1 N N N N N N 10.469 12.826 -6.850  3.884   -0.589 -1.547 H19 N40 52 
N40 H20 H20 H 0 1 N N N N N N 9.073  13.710 -7.554  3.828   0.408  -0.073 H20 N40 53 
N40 H21 H21 H 0 1 N N N N N N 8.903  11.072 -6.030  3.775   -2.643 -0.101 H21 N40 54 
N40 H22 H22 H 0 1 N N N N N N 6.882  12.991 -7.276  4.127   -0.604 2.143  H22 N40 55 
N40 H23 H23 H 0 1 N N N N N N 7.133  11.252 -7.650  2.671   -1.585 1.851  H23 N40 56 
N40 H24 H24 H 0 1 N N N N N N 5.090  11.758 -6.247  4.093   -2.605 3.607  H24 N40 57 
N40 H25 H25 H 0 1 N N N N N N 6.236  10.581 -5.519  4.000   -3.654 2.172  H25 N40 58 
N40 H26 H26 H 0 1 N N N N N N 5.890  13.529 -4.809  6.265   -1.710 2.813  H26 N40 59 
N40 H27 H27 H 0 1 N N N N N N 5.498  12.102 -3.791  6.332   -3.479 2.997  H27 N40 60 
N40 H28 H28 H 0 1 N N N N N N 7.848  11.525 -3.601  7.369   -2.767 0.860  H28 N40 61 
N40 H29 H29 H 0 1 N N N N N N 7.617  13.243 -3.128  5.913   -3.749 0.568  H29 N40 62 
N40 H30 H30 H 0 1 N N N N N N 9.632  12.858 -4.563  5.947   -1.748 -0.896 H30 N40 63 
N40 H31 H31 H 0 1 N N N N N N 8.448  14.005 -5.277  6.040   -0.699 0.539  H31 N40 64 
N40 H32 H32 H 0 1 N N N N N N 11.353 14.296 -11.352 0.083   2.630  -1.874 H32 N40 65 
N40 H33 H33 H 0 1 N N N N N N 10.339 14.494 -13.592 1.783   4.301  0.031  H33 N40 66 
N40 H34 H34 H 0 1 N N N N N N 8.740  14.028 -12.919 0.461   4.938  -0.975 H34 N40 67 
N40 H35 H35 H 0 1 N N N N N N 9.462  11.786 -12.512 0.152   2.719  1.111  H35 N40 68 
N40 H36 H36 H 0 1 N N N N N N 11.752 9.945  -13.412 -3.373  4.444  0.658  H36 N40 69 
N40 H37 H37 H 0 1 N N N N N N 12.990 11.033 -14.126 -2.832  3.117  1.728  H37 N40 70 
N40 H38 H38 H 0 1 N N N N N N 11.650 11.645 -11.764 -1.681  4.019  -0.929 H38 N40 71 
N40 H39 H39 H 0 1 N N N N N N 12.234 12.914 -12.895 -1.757  2.369  -0.226 H39 N40 72 
N40 H40 H40 H 0 1 N N N N N N 10.299 16.439 -12.146 2.201   2.542  -3.223 H40 N40 73 
N40 H41 H41 H 0 1 N N N N N N 8.776  15.961 -11.323 1.504   4.177  -3.132 H41 N40 74 
N40 H42 H42 H 0 1 N N N N N N 9.820  10.236 -7.519  2.087   -2.203 -1.952 H42 N40 75 
N40 H43 H43 H 0 1 N N N N N N 8.597  13.605 -10.373 2.195   1.907  0.024  H43 N40 76 
N40 H44 H44 H 0 1 N N N N N N 11.199 10.798 -15.876 -2.072  5.554  2.477  H44 N40 77 
N40 H45 H45 H 0 1 N N N N N N 10.135 17.264 -10.011 3.842   4.177  -2.641 H45 N40 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N40 O29 C25 DOUB N N 1  
N40 N26 C25 SING N N 2  
N40 N26 C27 SING N N 3  
N40 C25 C24 SING N N 4  
N40 C27 C28 SING N N 5  
N40 C24 C23 SING N N 6  
N40 C24 C28 SING N N 7  
N40 C23 C22 SING N N 8  
N40 C22 C30 SING N N 9  
N40 C22 N21 SING N N 10 
N40 C09 C10 SING N N 11 
N40 C09 C08 SING N N 12 
N40 C30 O31 SING N N 13 
N40 C07 C08 SING N N 14 
N40 C07 C06 SING N N 15 
N40 O01 S02 DOUB N N 16 
N40 N21 C20 SING N N 17 
N40 C06 C05 SING N N 18 
N40 O33 S02 DOUB N N 19 
N40 C05 C04 SING N N 20 
N40 C04 C03 SING N N 21 
N40 O32 C20 DOUB N N 22 
N40 C20 C12 SING N N 23 
N40 S02 C03 SING N N 24 
N40 S02 N11 SING N N 25 
N40 C12 N11 SING N N 26 
N40 C12 C13 SING N N 27 
N40 C13 C14 SING N N 28 
N40 C15 C14 SING N N 29 
N40 C15 C16 SING N N 30 
N40 C14 C19 SING N N 31 
N40 C16 C17 SING N N 32 
N40 C19 C18 SING N N 33 
N40 C17 C18 SING N N 34 
N40 C03 H1  SING N N 35 
N40 C03 H2  SING N N 36 
N40 C04 H3  SING N N 37 
N40 C04 H4  SING N N 38 
N40 C05 H5  SING N N 39 
N40 C05 H6  SING N N 40 
N40 C06 H7  SING N N 41 
N40 C06 H8  SING N N 42 
N40 C07 H9  SING N N 43 
N40 C07 H10 SING N N 44 
N40 C08 H11 SING N N 45 
N40 C08 H12 SING N N 46 
N40 C09 H13 SING N N 47 
N40 C09 H14 SING N N 48 
N40 C10 H15 SING N N 49 
N40 C10 H16 SING N N 50 
N40 C10 H17 SING N N 51 
N40 C12 H18 SING N N 52 
N40 C13 H19 SING N N 53 
N40 C13 H20 SING N N 54 
N40 C14 H21 SING N N 55 
N40 C15 H22 SING N N 56 
N40 C15 H23 SING N N 57 
N40 C16 H24 SING N N 58 
N40 C16 H25 SING N N 59 
N40 C17 H26 SING N N 60 
N40 C17 H27 SING N N 61 
N40 C18 H28 SING N N 62 
N40 C18 H29 SING N N 63 
N40 C19 H30 SING N N 64 
N40 C19 H31 SING N N 65 
N40 C22 H32 SING N N 66 
N40 C23 H33 SING N N 67 
N40 C23 H34 SING N N 68 
N40 C24 H35 SING N N 69 
N40 C27 H36 SING N N 70 
N40 C27 H37 SING N N 71 
N40 C28 H38 SING N N 72 
N40 C28 H39 SING N N 73 
N40 C30 H40 SING N N 74 
N40 C30 H41 SING N N 75 
N40 N11 H42 SING N N 76 
N40 N21 H43 SING N N 77 
N40 N26 H44 SING N N 78 
N40 O31 H45 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N40 SMILES           ACDLabs              12.01 "C(CCCCCCC)S(NC(CC1CCCCC1)C(NC(CO)CC2CCNC2=O)=O)(=O)=O"                                                                                                                                
N40 InChI            InChI                1.03  "InChI=1S/C24H45N3O5S/c1-2-3-4-5-6-10-15-33(31,32)27-22(16-19-11-8-7-9-12-19)24(30)26-21(18-28)17-20-13-14-25-23(20)29/h19-22,27-28H,2-18H2,1H3,(H,25,29)(H,26,30)/t20-,21-,22-/m0/s1" 
N40 InChIKey         InChI                1.03  RZTXHLLGLPTYGI-FKBYEOEOSA-N                                                                                                                                                            
N40 SMILES_CANONICAL CACTVS               3.385 "CCCCCCCC[S](=O)(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O"                                                                                                                  
N40 SMILES           CACTVS               3.385 "CCCCCCCC[S](=O)(=O)N[CH](CC1CCCCC1)C(=O)N[CH](CO)C[CH]2CCNC2=O"                                                                                                                       
N40 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCS(=O)(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO"                                                                                                                   
N40 SMILES           "OpenEye OEToolkits" 2.0.6 "CCCCCCCCS(=O)(=O)NC(CC1CCCCC1)C(=O)NC(CC2CCNC2=O)CO"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
N40 "SYSTEMATIC NAME" ACDLabs              12.01 "3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-(octylsulfonyl)-L-alaninamide"                            
N40 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-3-cyclohexyl-2-(octylsulfonylamino)-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N40 "Create component" 2016-09-12 RCSB 
N40 "Modify formula"   2016-09-14 RCSB 
N40 "Initial release"  2016-11-23 RCSB 
N40 "Modify synonyms"  2021-03-01 PDBE 
N40 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      N40 
_pdbx_chem_comp_synonyms.name         "3-cyclohexyl-N~2~-(octylsulfonyl)-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide (bound form)" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            N40 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C30 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
