data_KZ0
# 
_chem_comp.id                                    KZ0 
_chem_comp.name                                  "2,4,6-tris(chloromethyl)-1,3,5-triazine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H6 Cl3 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Chemical crosslinker" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        226.491 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KZ0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Z8O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KZ0 N1  N1  N  0 1 Y N N N N N -19.093 19.361 9.693  0.706  -1.146 0.071  N1  KZ0 1  
KZ0 C1  C1  C  0 1 Y N N N N N -20.626 17.192 9.339  -0.467 1.145  -0.537 C1  KZ0 2  
KZ0 C2  C2  C  0 1 Y N N N N N -20.250 19.392 9.019  1.295  -0.001 0.374  C2  KZ0 3  
KZ0 C5  C3  C  0 1 N N N N N N -20.606 20.708 8.420  2.634  -0.002 1.066  C5  KZ0 4  
KZ0 C4  C4  C  0 1 N N N N N N -17.489 18.156 10.969 -1.139 -2.450 -0.881 C4  KZ0 5  
KZ0 C3  C5  C  0 1 Y N N N N N -18.750 18.167 10.197 -0.469 -1.145 -0.536 C3  KZ0 6  
KZ0 N   N2  N  0 1 Y N N N N N -21.055 18.337 8.827  0.708  1.145  0.070  N   KZ0 7  
KZ0 N2  N3  N  0 1 Y N N N N N -19.481 17.036 10.039 -1.055 0.001  -0.839 N2  KZ0 8  
KZ0 C   C6  C  0 1 N N N N N N -21.490 15.990 9.150  -1.136 2.451  -0.882 C   KZ0 9  
KZ0 H1  H1  H  0 1 N N N N N N -19.687 21.242 8.136  2.721  0.888  1.689  H1  KZ0 10 
KZ0 H2  H2  H  0 1 N N N N N N -21.228 20.548 7.527  2.720  -0.892 1.689  H2  KZ0 11 
KZ0 H4  H4  H  0 1 N N N N N N -17.051 17.148 10.932 -1.749 -2.319 -1.775 H4  KZ0 12 
KZ0 H5  H5  H  0 1 N N N N N N -16.787 18.877 10.526 -0.380 -3.210 -1.067 H5  KZ0 13 
KZ0 H7  H7  H  0 1 N N N N N N -21.878 15.986 8.121  -0.376 3.210  -1.069 H7  KZ0 14 
KZ0 H8  H8  H  0 1 N N N N N N -20.887 15.086 9.318  -1.747 2.321  -1.775 H8  KZ0 15 
KZ0 CL1 CL1 CL 0 0 N Y N N N N -22.921 15.990 10.335 -2.180 2.973  0.492  CL1 KZ0 16 
KZ0 CL3 CL3 CL 0 0 N Y N N N N -17.805 18.620 12.739 -2.187 -2.969 0.492  CL3 KZ0 17 
KZ0 CL2 CL2 CL 0 0 N Y N N N N -21.540 21.705 9.648  3.948  -0.003 -0.169 CL2 KZ0 18 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KZ0 C5 C2  SING N N 1  
KZ0 N  C2  DOUB Y N 2  
KZ0 N  C1  SING Y N 3  
KZ0 C2 N1  SING Y N 4  
KZ0 C  C1  SING N N 5  
KZ0 C1 N2  DOUB Y N 6  
KZ0 N1 C3  DOUB Y N 7  
KZ0 N2 C3  SING Y N 8  
KZ0 C3 C4  SING N N 9  
KZ0 C5 H1  SING N N 10 
KZ0 C5 H2  SING N N 11 
KZ0 C4 H4  SING N N 12 
KZ0 C4 H5  SING N N 13 
KZ0 C  H7  SING N N 14 
KZ0 C  H8  SING N N 15 
KZ0 C  CL1 SING N N 16 
KZ0 C4 CL3 SING N N 17 
KZ0 C5 CL2 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KZ0 InChI            InChI                1.06  "InChI=1S/C6H6Cl3N3/c7-1-4-10-5(2-8)12-6(3-9)11-4/h1-3H2" 
KZ0 InChIKey         InChI                1.06  RICRAVHJCLFPFF-UHFFFAOYSA-N                               
KZ0 SMILES_CANONICAL CACTVS               3.385 "ClCc1nc(CCl)nc(CCl)n1"                                   
KZ0 SMILES           CACTVS               3.385 "ClCc1nc(CCl)nc(CCl)n1"                                   
KZ0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(c1nc(nc(n1)CCl)CCl)Cl"                                 
KZ0 SMILES           "OpenEye OEToolkits" 2.0.7 "C(c1nc(nc(n1)CCl)CCl)Cl"                                 
# 
_pdbx_chem_comp_identifier.comp_id           KZ0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2,4,6-tris(chloromethyl)-1,3,5-triazine" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      KZ0 
_pdbx_chem_comp_synonyms.name         "Chemical crosslinker" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KZ0 "Create component"         2022-06-08 PDBE 
KZ0 "Modify leaving atom flag" 2022-06-08 PDBE 
KZ0 "Modify synonyms"          2022-07-01 PDBE 
KZ0 "Modify coordinates"       2022-07-19 PDBE 
KZ0 "Modify descriptor"        2022-08-22 RCSB 
KZ0 "Initial release"          2023-06-28 RCSB 
KZ0 "Modify PCM"               2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 KZ0 CY3 None Crosslinker "Amino-acid side chain" "Any position" C4 SG ? ? 
2 KZ0 CYS None Crosslinker "Amino-acid side chain" "Any position" C  SG ? ? 
3 KZ0 CYS None Crosslinker "Amino-acid side chain" "Any position" C5 SG ? ? 
# 
