data_JK0
# 
_chem_comp.id                                    JK0 
_chem_comp.name                                  "N-[(1R)-2-(benzylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-(4-tert-butylphenyl)-3-hydroxypropanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H31 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        445.553 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JK0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8TPE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JK0 C10 C1  C 0 1 Y N N N N N 36.547 -0.812 41.767 -1.775 -0.470 0.281  C10 JK0 1  
JK0 C13 C2  C 0 1 N N N N N N 38.209 -4.570 42.411 3.871  -0.723 -1.110 C13 JK0 2  
JK0 C15 C3  C 0 1 Y N N N N N 37.083 -6.427 41.031 6.122  -0.677 -0.014 C15 JK0 3  
JK0 C17 C4  C 0 1 Y N N N N N 36.901 -8.679 41.912 7.564  1.224  -0.204 C17 JK0 4  
JK0 C20 C5  C 0 1 Y N N N N N 35.279 -3.542 37.812 0.762  1.658  2.072  C20 JK0 5  
JK0 C21 C6  C 0 1 Y N N N N N 34.106 -3.991 37.188 0.554  3.029  2.060  C21 JK0 6  
JK0 C22 C7  C 0 1 Y N N N N N 32.872 -3.664 37.740 0.008  3.617  0.935  C22 JK0 7  
JK0 C24 C8  C 0 1 Y N N N N N 33.863 -2.488 39.460 -0.136 1.584  -0.139 C24 JK0 8  
JK0 C26 C9  C 0 1 Y N N N N N 36.088 -0.797 44.159 -3.399 0.258  -1.326 C26 JK0 9  
JK0 C28 C10 C 0 1 Y N N N N N 38.371 -0.649 43.394 -3.514 1.045  0.936  C28 JK0 10 
JK0 C02 C11 C 0 1 N N N N N N 36.637 -3.233 40.872 1.638  -0.901 -0.152 C02 JK0 11 
JK0 C03 C12 C 0 1 N N R N N N 36.396 -2.245 39.707 0.623  -0.564 0.910  C03 JK0 12 
JK0 C05 C13 C 0 1 N N N N N N 35.497 0.173  39.510 -0.723 -2.576 0.630  C05 JK0 13 
JK0 C06 C14 C 0 1 N N N N N N 35.088 1.525  40.113 -1.994 -3.265 0.205  C06 JK0 14 
JK0 C07 C15 C 0 1 N N N N N N 36.018 2.684  39.681 -1.782 -4.780 0.220  C07 JK0 15 
JK0 C11 C16 C 0 1 Y N N N N N 35.153 -2.766 38.979 0.411  0.927  0.948  C11 JK0 16 
JK0 C14 C17 C 0 1 Y N N N N N 37.730 -6.028 42.205 5.176  -0.038 -0.793 C14 JK0 17 
JK0 C16 C18 C 0 1 Y N N N N N 36.670 -7.756 40.891 7.316  -0.047 0.280  C16 JK0 18 
JK0 C18 C19 C 0 1 Y N N N N N 37.550 -8.288 43.081 6.623  1.859  -0.993 C18 JK0 19 
JK0 C19 C20 C 0 1 Y N N N N N 37.963 -6.957 43.224 5.426  1.231  -1.283 C19 JK0 20 
JK0 C25 C21 C 0 1 Y N N N N N 35.634 -0.868 42.827 -2.280 -0.489 -1.012 C25 JK0 21 
JK0 C27 C22 C 0 1 Y N N N N N 37.459 -0.682 44.435 -4.015 1.024  -0.353 C27 JK0 22 
JK0 C29 C23 C 0 1 Y N N N N N 37.918 -0.705 42.060 -2.396 0.300  1.255  C29 JK0 23 
JK0 C30 C24 C 0 1 N N N N N N 37.971 -0.617 45.906 -5.236 1.838  -0.699 C30 JK0 24 
JK0 C31 C25 C 0 1 N N N N N N 38.729 -1.926 46.173 -5.718 2.587  0.545  C31 JK0 25 
JK0 C32 C26 C 0 1 N N N N N N 36.797 -0.499 46.875 -4.883 2.845  -1.795 C32 JK0 26 
JK0 C33 C27 C 0 1 N N N N N N 38.900 0.590  46.115 -6.344 0.909  -1.196 C33 JK0 27 
JK0 N01 N1  N 0 1 N N N N N N 38.010 -3.663 41.270 2.885  -0.396 -0.077 N01 JK0 28 
JK0 N04 N2  N 0 1 N N N N N N 36.125 -0.925 40.316 -0.645 -1.231 0.603  N04 JK0 29 
JK0 N23 N3  N 0 1 Y N N N N N 32.758 -2.926 38.848 -0.315 2.890  -0.117 N23 JK0 30 
JK0 O08 O1  O 0 1 N N N N N N 37.310 2.338  40.111 -2.987 -5.434 -0.184 O08 JK0 31 
JK0 O09 O2  O 0 1 N N N N N N 35.189 -0.026 38.386 0.229  -3.231 0.998  O09 JK0 32 
JK0 O12 O3  O 0 1 N N N N N N 35.699 -3.653 41.499 1.332  -1.625 -1.075 O12 JK0 33 
JK0 H1  H1  H 0 1 N N N N N N 39.285 -4.597 42.637 3.508  -0.383 -2.079 H1  JK0 34 
JK0 H2  H2  H 0 1 N N N N N N 37.664 -4.154 43.271 4.025  -1.802 -1.137 H2  JK0 35 
JK0 H3  H3  H 0 1 N N N N N N 36.904 -5.715 40.239 5.926  -1.668 0.368  H3  JK0 36 
JK0 H4  H4  H 0 1 N N N N N N 36.575 -9.702 41.795 8.499  1.715  0.023  H4  JK0 37 
JK0 H5  H5  H 0 1 N N N N N N 36.251 -3.785 37.408 1.191  1.172  2.936  H5  JK0 38 
JK0 H6  H6  H 0 1 N N N N N N 34.160 -4.585 36.288 0.816  3.630  2.918  H6  JK0 39 
JK0 H7  H7  H 0 1 N N N N N N 31.974 -4.019 37.256 -0.157 4.684  0.917  H7  JK0 40 
JK0 H8  H8  H 0 1 N N N N N N 33.760 -1.898 40.359 -0.412 1.022  -1.018 H8  JK0 41 
JK0 H9  H9  H 0 1 N N N N N N 35.377 -0.831 44.971 -3.792 0.244  -2.331 H9  JK0 42 
JK0 H10 H10 H 0 1 N N N N N N 39.428 -0.580 43.603 -3.998 1.644  1.693  H10 JK0 43 
JK0 H11 H11 H 0 1 N N N N N N 37.265 -2.215 39.033 0.986  -0.904 1.880  H11 JK0 44 
JK0 H12 H12 H 0 1 N N N N N N 34.063 1.758  39.789 -2.797 -3.004 0.894  H12 JK0 45 
JK0 H13 H13 H 0 1 N N N N N N 35.116 1.443  41.210 -2.261 -2.946 -0.802 H13 JK0 46 
JK0 H14 H14 H 0 1 N N N N N N 35.699 3.624  40.154 -0.979 -5.041 -0.469 H14 JK0 47 
JK0 H15 H15 H 0 1 N N N N N N 35.999 2.799  38.587 -1.515 -5.100 1.227  H15 JK0 48 
JK0 H16 H16 H 0 1 N N N N N N 36.169 -8.070 39.987 8.055  -0.546 0.889  H16 JK0 49 
JK0 H17 H17 H 0 1 N N N N N N 37.733 -9.004 43.869 6.822  2.847  -1.382 H17 JK0 50 
JK0 H18 H18 H 0 1 N N N N N N 38.465 -6.646 44.128 4.688  1.730  -1.892 H18 JK0 51 
JK0 H19 H19 H 0 1 N N N N N N 34.578 -0.966 42.623 -1.799 -1.087 -1.773 H19 JK0 52 
JK0 H20 H20 H 0 1 N N N N N N 38.634 -0.665 41.252 -2.005 0.316  2.262  H20 JK0 53 
JK0 H21 H21 H 0 1 N N N N N N 39.111 -1.925 47.205 -4.928 3.249  0.900  H21 JK0 54 
JK0 H22 H22 H 0 1 N N N N N N 38.048 -2.779 46.035 -6.601 3.176  0.296  H22 JK0 55 
JK0 H23 H23 H 0 1 N N N N N N 39.571 -2.012 45.471 -5.969 1.870  1.327  H23 JK0 56 
JK0 H24 H24 H 0 1 N N N N N N 37.176 -0.454 47.907 -4.540 2.312  -2.682 H24 JK0 57 
JK0 H25 H25 H 0 1 N N N N N N 36.229 0.417  46.653 -5.766 3.434  -2.045 H25 JK0 58 
JK0 H26 H26 H 0 1 N N N N N N 36.140 -1.374 46.763 -4.094 3.507  -1.441 H26 JK0 59 
JK0 H27 H27 H 0 1 N N N N N N 39.245 0.611  47.159 -6.595 0.191  -0.415 H27 JK0 60 
JK0 H28 H28 H 0 1 N N N N N N 39.767 0.506  45.444 -7.227 1.497  -1.446 H28 JK0 61 
JK0 H29 H29 H 0 1 N N N N N N 38.352 1.517  45.891 -6.001 0.375  -2.083 H29 JK0 62 
JK0 H30 H30 H 0 1 N N N N N N 38.801 -3.332 40.756 3.130  0.184  0.661  H30 JK0 63 
JK0 H31 H31 H 0 1 N N N N N N 37.920 3.024  39.867 -2.925 -6.399 -0.198 H31 JK0 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JK0 C21 C22 DOUB Y N 1  
JK0 C21 C20 SING Y N 2  
JK0 C22 N23 SING Y N 3  
JK0 C20 C11 DOUB Y N 4  
JK0 O09 C05 DOUB N N 5  
JK0 N23 C24 DOUB Y N 6  
JK0 C11 C24 SING Y N 7  
JK0 C11 C03 SING N N 8  
JK0 C05 C06 SING N N 9  
JK0 C05 N04 SING N N 10 
JK0 C07 O08 SING N N 11 
JK0 C07 C06 SING N N 12 
JK0 C03 N04 SING N N 13 
JK0 C03 C02 SING N N 14 
JK0 N04 C10 SING N N 15 
JK0 C02 N01 SING N N 16 
JK0 C02 O12 DOUB N N 17 
JK0 C16 C15 DOUB Y N 18 
JK0 C16 C17 SING Y N 19 
JK0 C15 C14 SING Y N 20 
JK0 N01 C13 SING N N 21 
JK0 C10 C29 DOUB Y N 22 
JK0 C10 C25 SING Y N 23 
JK0 C17 C18 DOUB Y N 24 
JK0 C29 C28 SING Y N 25 
JK0 C14 C13 SING N N 26 
JK0 C14 C19 DOUB Y N 27 
JK0 C25 C26 DOUB Y N 28 
JK0 C18 C19 SING Y N 29 
JK0 C28 C27 DOUB Y N 30 
JK0 C26 C27 SING Y N 31 
JK0 C27 C30 SING N N 32 
JK0 C30 C33 SING N N 33 
JK0 C30 C31 SING N N 34 
JK0 C30 C32 SING N N 35 
JK0 C13 H1  SING N N 36 
JK0 C13 H2  SING N N 37 
JK0 C15 H3  SING N N 38 
JK0 C17 H4  SING N N 39 
JK0 C20 H5  SING N N 40 
JK0 C21 H6  SING N N 41 
JK0 C22 H7  SING N N 42 
JK0 C24 H8  SING N N 43 
JK0 C26 H9  SING N N 44 
JK0 C28 H10 SING N N 45 
JK0 C03 H11 SING N N 46 
JK0 C06 H12 SING N N 47 
JK0 C06 H13 SING N N 48 
JK0 C07 H14 SING N N 49 
JK0 C07 H15 SING N N 50 
JK0 C16 H16 SING N N 51 
JK0 C18 H17 SING N N 52 
JK0 C19 H18 SING N N 53 
JK0 C25 H19 SING N N 54 
JK0 C29 H20 SING N N 55 
JK0 C31 H21 SING N N 56 
JK0 C31 H22 SING N N 57 
JK0 C31 H23 SING N N 58 
JK0 C32 H24 SING N N 59 
JK0 C32 H25 SING N N 60 
JK0 C32 H26 SING N N 61 
JK0 C33 H27 SING N N 62 
JK0 C33 H28 SING N N 63 
JK0 C33 H29 SING N N 64 
JK0 N01 H30 SING N N 65 
JK0 O08 H31 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JK0 SMILES           ACDLabs              12.01 "CC(C)(C)c1ccc(cc1)N(C(=O)CCO)C(c1cccnc1)C(=O)NCc1ccccc1"                                                                                                                          
JK0 InChI            InChI                1.06  "InChI=1S/C27H31N3O3/c1-27(2,3)22-11-13-23(14-12-22)30(24(32)15-17-31)25(21-10-7-16-28-19-21)26(33)29-18-20-8-5-4-6-9-20/h4-14,16,19,25,31H,15,17-18H2,1-3H3,(H,29,33)/t25-/m1/s1" 
JK0 InChIKey         InChI                1.06  IEQMNFUCIIDFPY-RUZDIDTESA-N                                                                                                                                                        
JK0 SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)c1ccc(cc1)N([C@@H](C(=O)NCc2ccccc2)c3cccnc3)C(=O)CCO"                                                                                                                     
JK0 SMILES           CACTVS               3.385 "CC(C)(C)c1ccc(cc1)N([CH](C(=O)NCc2ccccc2)c3cccnc3)C(=O)CCO"                                                                                                                       
JK0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1ccc(cc1)N([C@H](c2cccnc2)C(=O)NCc3ccccc3)C(=O)CCO"                                                                                                                      
JK0 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1ccc(cc1)N(C(c2cccnc2)C(=O)NCc3ccccc3)C(=O)CCO"                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JK0 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(1R)-2-(benzylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-(4-tert-butylphenyl)-3-hydroxypropanamide"                               
JK0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(4-~{tert}-butylphenyl)-3-oxidanyl-~{N}-[(1~{R})-2-oxidanylidene-2-[(phenylmethyl)amino]-1-pyridin-3-yl-ethyl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JK0 "Create component" 2023-08-07 RCSB 
JK0 "Initial release"  2024-01-24 RCSB 
JK0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            JK0 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C06 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
