data_I70
# 
_chem_comp.id                                    I70 
_chem_comp.name                                  "(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H46 N6 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-09-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        550.691 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I70 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I70 C1  C1  C 0 1 N N N N N N ? ? ? 4.087  2.319  1.333  C1  I70 1  
I70 C11 C2  C 0 1 N N S N N N ? ? ? -2.598 0.057  0.580  C11 I70 2  
I70 C12 C3  C 0 1 N N N N N N ? ? ? -1.258 -0.305 -0.007 C12 I70 3  
I70 C13 C4  C 0 1 N N N N N N ? ? ? -0.418 2.090  0.130  C13 I70 4  
I70 C14 C5  C 0 1 N N S N N N ? ? ? 0.979  0.515  -0.892 C14 I70 5  
I70 C15 C6  C 0 1 N N N N N N ? ? ? 2.080  0.446  0.134  C15 I70 6  
I70 C16 C7  C 0 1 N N S N N N ? ? ? 0.201  2.829  -1.076 C16 I70 7  
I70 C17 C8  C 0 1 N N S N N N ? ? ? 4.368  -0.083 0.785  C17 I70 8  
I70 C18 C9  C 0 1 N N N N N N ? ? ? -0.118 2.312  -2.480 C18 I70 9  
I70 C19 C10 C 0 1 N N N N N N ? ? ? 5.380  -1.155 0.375  C19 I70 10 
I70 C20 C11 C 0 1 N N S N N N ? ? ? 4.724  -2.535 0.463  C20 I70 11 
I70 C21 C12 C 0 1 N N N N N N ? ? ? 5.737  -3.640 0.083  C21 I70 12 
I70 C22 C13 C 0 1 N N N N N N ? ? ? 5.449  -3.827 -1.423 C22 I70 13 
I70 C23 C14 C 0 1 N N N N N N ? ? ? -1.303 1.356  -2.627 C23 I70 14 
I70 C24 C15 C 0 1 N N N N N N ? ? ? 3.627  -2.666 -0.571 C24 I70 15 
I70 C25 C16 C 0 1 N N N N N N ? ? ? 0.106  3.269  -3.652 C25 I70 16 
I70 C26 C17 C 0 1 N N N N N N ? ? ? -2.287 -1.490 2.517  C26 I70 17 
I70 C27 C18 C 0 1 N N N N N N ? ? ? -7.731 -0.578 0.932  C27 I70 18 
I70 C28 C19 C 0 1 N N N N N N ? ? ? -8.099 -2.074 -1.035 C28 I70 19 
I70 C29 C20 C 0 1 N N N N N N ? ? ? -7.389 0.296  -1.384 C29 I70 20 
I70 C30 C21 C 0 1 N N N N N N ? ? ? -2.529 -0.036 2.106  C30 I70 21 
I70 C31 C22 C 0 1 N N N N N N ? ? ? -1.382 0.837  2.618  C31 I70 22 
I70 C32 C23 C 0 1 N N N N N N ? ? ? -3.849 0.451  2.707  C32 I70 23 
I70 C34 C24 C 0 1 N N R N N N ? ? ? 1.122  1.791  -1.750 C34 I70 24 
I70 C7  C25 C 0 1 N N N N N N ? ? ? -7.251 -0.929 -0.478 C7  I70 25 
I70 C8  C26 C 0 1 N N R N N N ? ? ? 5.070  1.274  0.872  C8  I70 26 
I70 C9  C27 C 0 1 N N N N N N ? ? ? -4.909 -0.489 0.033  C9  I70 27 
I70 N10 N1  N 0 1 N N N N N N ? ? ? -3.617 -0.869 0.080  N10 I70 28 
I70 N13 N2  N 0 1 N N N N N N ? ? ? -0.339 0.656  -0.231 N13 I70 29 
I70 N16 N3  N 0 1 N N N N N N ? ? ? 3.297  -0.016 -0.213 N16 I70 30 
I70 N2  N4  N 0 1 N N N N N N ? ? ? 3.537  2.232  2.561  N2  I70 31 
I70 N23 N5  N 0 1 N N N N N N ? ? ? 4.058  -3.398 -1.612 N23 I70 32 
I70 N8  N6  N 0 1 N N N N N N ? ? ? -5.846 -1.342 -0.427 N8  I70 33 
I70 O26 O1  O 0 1 N N N N N N ? ? ? 2.520  -2.181 -0.474 O26 I70 34 
I70 O29 O2  O 0 1 N N N N N N ? ? ? -5.229 0.623  0.406  O29 I70 35 
I70 O33 O3  O 0 1 N N N N N N ? ? ? -1.007 -1.459 -0.278 O33 I70 36 
I70 O38 O4  O 0 1 N N N N N N ? ? ? 1.871  0.807  1.273  O38 I70 37 
I70 O5  O5  O 0 1 N N N N N N ? ? ? 3.794  3.241  0.602  O5  I70 38 
I70 O9  O6  O 0 1 N N N N N N ? ? ? 5.576  1.632  -0.416 O9  I70 39 
I70 H1  H1  H 0 1 N N N N N N ? ? ? -2.859 1.075  0.290  H1  I70 40 
I70 H2  H2  H 0 1 N N N N N N ? ? ? 0.159  2.287  1.033  H2  I70 41 
I70 H3  H3  H 0 1 N N N N N N ? ? ? -1.456 2.391  0.268  H3  I70 42 
I70 H4  H4  H 0 1 N N N N N N ? ? ? 0.994  -0.372 -1.525 H4  I70 43 
I70 H5  H5  H 0 1 N N N N N N ? ? ? 0.512  3.864  -0.930 H5  I70 44 
I70 H6  H6  H 0 1 N N N N N N ? ? ? 3.943  -0.336 1.756  H6  I70 45 
I70 H7  H7  H 0 1 N N N N N N ? ? ? 5.708  -0.973 -0.648 H7  I70 46 
I70 H8  H8  H 0 1 N N N N N N ? ? ? 6.239  -1.118 1.045  H8  I70 47 
I70 H9  H9  H 0 1 N N N N N N ? ? ? 4.327  -2.705 1.464  H9  I70 48 
I70 H10 H10 H 0 1 N N N N N N ? ? ? 6.761  -3.304 0.246  H10 I70 49 
I70 H11 H11 H 0 1 N N N N N N ? ? ? 5.537  -4.559 0.636  H11 I70 50 
I70 H12 H12 H 0 1 N N N N N N ? ? ? 6.120  -3.205 -2.015 H12 I70 51 
I70 H13 H13 H 0 1 N N N N N N ? ? ? 5.562  -4.875 -1.701 H13 I70 52 
I70 H14 H14 H 0 1 N N N N N N ? ? ? -2.105 1.852  -3.173 H14 I70 53 
I70 H15 H15 H 0 1 N N N N N N ? ? ? -0.988 0.467  -3.173 H15 I70 54 
I70 H16 H16 H 0 1 N N N N N N ? ? ? -1.661 1.067  -1.639 H16 I70 55 
I70 H17 H17 H 0 1 N N N N N N ? ? ? 0.619  4.163  -3.299 H17 I70 56 
I70 H18 H18 H 0 1 N N N N N N ? ? ? 0.714  2.778  -4.412 H18 I70 57 
I70 H19 H19 H 0 1 N N N N N N ? ? ? -0.856 3.549  -4.082 H19 I70 58 
I70 H20 H20 H 0 1 N N N N N N ? ? ? -1.347 -1.837 2.089  H20 I70 59 
I70 H21 H21 H 0 1 N N N N N N ? ? ? -2.237 -1.556 3.604  H21 I70 60 
I70 H22 H22 H 0 1 N N N N N N ? ? ? -3.104 -2.112 2.152  H22 I70 61 
I70 H23 H23 H 0 1 N N N N N N ? ? ? -8.776 -0.270 0.894  H23 I70 62 
I70 H24 H24 H 0 1 N N N N N N ? ? ? -7.632 -1.451 1.577  H24 I70 63 
I70 H25 H25 H 0 1 N N N N N N ? ? ? -7.126 0.238  1.329  H25 I70 64 
I70 H26 H26 H 0 1 N N N N N N ? ? ? -7.757 -2.324 -2.039 H26 I70 65 
I70 H27 H27 H 0 1 N N N N N N ? ? ? -8.000 -2.947 -0.390 H27 I70 66 
I70 H28 H28 H 0 1 N N N N N N ? ? ? -9.144 -1.766 -1.073 H28 I70 67 
I70 H29 H29 H 0 1 N N N N N N ? ? ? -7.047 0.046  -2.388 H29 I70 68 
I70 H30 H30 H 0 1 N N N N N N ? ? ? -8.434 0.604  -1.422 H30 I70 69 
I70 H31 H31 H 0 1 N N N N N N ? ? ? -6.785 1.112  -0.987 H31 I70 70 
I70 H32 H32 H 0 1 N N N N N N ? ? ? -0.449 0.523  2.149  H32 I70 71 
I70 H33 H33 H 0 1 N N N N N N ? ? ? -1.580 1.880  2.371  H33 I70 72 
I70 H34 H34 H 0 1 N N N N N N ? ? ? -1.298 0.729  3.700  H34 I70 73 
I70 H35 H35 H 0 1 N N N N N N ? ? ? -3.799 0.385  3.794  H35 I70 74 
I70 H36 H36 H 0 1 N N N N N N ? ? ? -4.021 1.487  2.414  H36 I70 75 
I70 H37 H37 H 0 1 N N N N N N ? ? ? -4.666 -0.170 2.342  H37 I70 76 
I70 H38 H38 H 0 1 N N N N N N ? ? ? 2.113  2.055  -2.118 H38 I70 77 
I70 H39 H39 H 0 1 N Y N N N N ? ? ? 5.894  1.211  1.582  H39 I70 78 
I70 H40 H40 H 0 1 N N N N N N ? ? ? -3.361 -1.757 -0.217 H40 I70 79 
I70 H41 H41 H 0 1 N N N N N N ? ? ? 3.465  -0.304 -1.124 H41 I70 80 
I70 H42 H42 H 0 1 N N N N N N ? ? ? 3.828  1.539  3.174  H42 I70 81 
I70 H43 H43 H 0 1 N N N N N N ? ? ? 2.851  2.862  2.831  H43 I70 82 
I70 H44 H44 H 0 1 N N N N N N ? ? ? 3.520  -3.615 -2.389 H44 I70 83 
I70 H45 H45 H 0 1 N N N N N N ? ? ? -5.590 -2.229 -0.724 H45 I70 84 
I70 H46 H46 H 0 1 N N N N N N ? ? ? 6.216  1.002  -0.776 H46 I70 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I70 C32 C30 SING N N 1  
I70 C26 C30 SING N N 2  
I70 C30 C11 SING N N 3  
I70 C30 C31 SING N N 4  
I70 C13 C16 SING N N 5  
I70 C13 N13 SING N N 6  
I70 O29 C9  DOUB N N 7  
I70 C16 C34 SING N N 8  
I70 C16 C18 SING N N 9  
I70 O38 C15 DOUB N N 10 
I70 C11 N10 SING N N 11 
I70 C11 C12 SING N N 12 
I70 C29 C7  SING N N 13 
I70 C9  N10 SING N N 14 
I70 C9  N8  SING N N 15 
I70 N13 C12 SING N N 16 
I70 N13 C14 SING N N 17 
I70 N2  C1  SING N N 18 
I70 C34 C18 SING N N 19 
I70 C34 C14 SING N N 20 
I70 C25 C18 SING N N 21 
I70 C12 O33 DOUB N N 22 
I70 C21 C22 SING N N 23 
I70 C21 C20 SING N N 24 
I70 C18 C23 SING N N 25 
I70 C15 C14 SING N N 26 
I70 C15 N16 SING N N 27 
I70 C22 N23 SING N N 28 
I70 C7  N8  SING N N 29 
I70 C7  C28 SING N N 30 
I70 C7  C27 SING N N 31 
I70 O9  C8  SING N N 32 
I70 C1  C8  SING N N 33 
I70 C1  O5  DOUB N N 34 
I70 C17 N16 SING N N 35 
I70 C17 C8  SING N N 36 
I70 C17 C19 SING N N 37 
I70 C20 C19 SING N N 38 
I70 C20 C24 SING N N 39 
I70 N23 C24 SING N N 40 
I70 C24 O26 DOUB N N 41 
I70 C11 H1  SING N N 42 
I70 C13 H2  SING N N 43 
I70 C13 H3  SING N N 44 
I70 C14 H4  SING N N 45 
I70 C16 H5  SING N N 46 
I70 C17 H6  SING N N 47 
I70 C19 H7  SING N N 48 
I70 C19 H8  SING N N 49 
I70 C20 H9  SING N N 50 
I70 C21 H10 SING N N 51 
I70 C21 H11 SING N N 52 
I70 C22 H12 SING N N 53 
I70 C22 H13 SING N N 54 
I70 C23 H14 SING N N 55 
I70 C23 H15 SING N N 56 
I70 C23 H16 SING N N 57 
I70 C25 H17 SING N N 58 
I70 C25 H18 SING N N 59 
I70 C25 H19 SING N N 60 
I70 C26 H20 SING N N 61 
I70 C26 H21 SING N N 62 
I70 C26 H22 SING N N 63 
I70 C27 H23 SING N N 64 
I70 C27 H24 SING N N 65 
I70 C27 H25 SING N N 66 
I70 C28 H26 SING N N 67 
I70 C28 H27 SING N N 68 
I70 C28 H28 SING N N 69 
I70 C29 H29 SING N N 70 
I70 C29 H30 SING N N 71 
I70 C29 H31 SING N N 72 
I70 C31 H32 SING N N 73 
I70 C31 H33 SING N N 74 
I70 C31 H34 SING N N 75 
I70 C32 H35 SING N N 76 
I70 C32 H36 SING N N 77 
I70 C32 H37 SING N N 78 
I70 C34 H38 SING N N 79 
I70 C8  H39 SING N N 80 
I70 N10 H40 SING N N 81 
I70 N16 H41 SING N N 82 
I70 N2  H42 SING N N 83 
I70 N2  H43 SING N N 84 
I70 N23 H44 SING N N 85 
I70 N8  H45 SING N N 86 
I70 O9  H46 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I70 SMILES           ACDLabs              12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)C(O)C(N)=O)N(CC21)C(=O)C(NC(=O)NC(C)(C)C)C(C)(C)C"                                                                                                                                                                 
I70 InChI            InChI                1.03  "InChI=1S/C27H46N6O6/c1-25(2,3)19(31-24(39)32-26(4,5)6)23(38)33-12-14-16(27(14,7)8)17(33)22(37)30-15(18(34)20(28)35)11-13-9-10-29-21(13)36/h13-19,34H,9-12H2,1-8H3,(H2,28,35)(H,29,36)(H,30,37)(H2,31,32,39)/t13-,14-,15-,16-,17-,18+,19+/m0/s1" 
I70 InChIKey         InChI                1.03  PGHPGMLPXLZINT-UYYZUGKPSA-N                                                                                                                                                                                                                      
I70 SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)NC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)C(N)=O)C2(C)C)C(C)(C)C"                                                                                                                                   
I70 SMILES           CACTVS               3.385 "CC(C)(C)NC(=O)N[CH](C(=O)N1C[CH]2[CH]([CH]1C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)C(N)=O)C2(C)C)C(C)(C)C"                                                                                                                                              
I70 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)[C@H](C(C)(C)C)NC(=O)NC(C)(C)C)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](C(=O)N)O)C"                                                                                                                                  
I70 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)NC(C)(C)C)C(=O)NC(CC3CCNC3=O)C(C(=O)N)O)C"                                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
I70 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide"                                                                 
I70 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-~{N}-[(2~{S},3~{R})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I70 "Create component" 2021-09-16 RCSB 
I70 "Initial release"  2022-03-09 RCSB 
I70 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            I70 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C8 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
