data_I60
# 
_chem_comp.id                                    I60 
_chem_comp.name                                  "[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(4-azanylbutanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H29 N7 O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-10 
_chem_comp.pdbx_modified_date                    2023-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        459.454 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I60 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7XXM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I60 N1  N1  N 0 1 N N N 11.636 -10.004 10.812 4.618  -4.745 0.923  N1  I60 1  
I60 C1  C1  C 0 1 N N N 12.605 -11.030 10.390 3.773  -4.231 -0.164 C1  I60 2  
I60 C2  C2  C 0 1 N N N 12.640 -12.255 11.285 2.569  -3.497 0.429  C2  I60 3  
I60 C3  C3  C 0 1 N N N 12.857 -13.563 10.540 1.689  -2.963 -0.703 C3  I60 4  
I60 C4  C4  C 0 1 N N N 11.663 -14.015 9.730  0.503  -2.239 -0.118 C4  I60 5  
I60 O1  O1  O 0 1 N N N 10.651 -13.342 9.586  0.375  -2.159 1.085  O1  I60 6  
I60 N2  N2  N 0 1 N N N 11.817 -15.181 9.112  -0.414 -1.682 -0.933 N2  I60 7  
I60 C5  C5  C 0 1 N N R 10.826 -15.729 8.215  -1.567 -0.979 -0.365 C5  I60 8  
I60 C6  C6  C 0 1 N N S 9.856  -16.608 9.008  -2.721 -0.991 -1.372 C6  I60 9  
I60 O2  O2  O 0 1 N N N 10.564 -17.644 9.689  -2.291 -0.400 -2.599 O2  I60 10 
I60 C7  C7  C 0 1 N N R 8.814  -17.174 8.057  -3.893 -0.187 -0.799 C7  I60 11 
I60 O3  O3  O 0 1 N N N 8.064  -16.060 7.505  -4.373 -0.826 0.413  O3  I60 12 
I60 C8  C8  C 0 1 N N N 7.169  -15.459 8.315  -5.680 -0.682 0.703  C8  I60 13 
I60 N3  N3  N 0 1 N N N 6.739  -14.285 7.803  -6.190 -1.250 1.814  N3  I60 14 
I60 O4  O4  O 0 1 N N N 6.820  -15.923 9.378  -6.399 -0.040 -0.036 O4  I60 15 
I60 C9  C9  C 0 1 N N R 9.532  -17.866 6.909  -3.418 1.232  -0.477 C9  I60 16 
I60 C10 C10 C 0 1 N N N 8.615  -18.370 5.841  -4.567 2.024  0.151  C10 I60 17 
I60 O5  O5  O 0 1 N N N 9.474  -19.049 4.950  -4.161 3.380  0.345  O5  I60 18 
I60 O6  O6  O 0 1 N N N 10.425 -16.950 6.257  -2.324 1.171  0.440  O6  I60 19 
I60 C11 C11 C 0 1 N N R 11.460 -16.463 7.094  -1.183 0.471  -0.059 C11 I60 20 
I60 N4  N4  N 0 1 N N N 12.265 -15.540 6.337  -0.117 0.493  0.946  N4  I60 21 
I60 C12 C12 C 0 1 N N N 13.558 -15.556 6.135  1.032  1.039  0.666  C12 I60 22 
I60 N5  N5  N 0 1 N N N 14.214 -14.567 5.440  2.107  1.105  1.547  N5  I60 23 
I60 C13 C13 C 0 1 N N S 15.635 -14.914 5.406  3.283  1.194  0.690  C13 I60 24 
I60 C14 C14 C 0 1 N N N 16.470 -14.519 4.216  4.451  1.992  1.200  C14 I60 25 
I60 O7  O7  O 0 1 N N N 16.300 -13.421 3.686  4.670  2.171  2.379  O7  I60 26 
I60 N6  N6  N 0 1 N N N 17.353 -15.418 3.763  5.241  2.494  0.208  N6  I60 27 
I60 C15 C15 C 0 1 N N N 17.814 -16.642 4.437  5.086  2.135  -1.192 C15 I60 28 
I60 C16 C16 C 0 1 N N R 16.907 -17.026 5.633  3.641  1.907  -1.641 C16 I60 29 
I60 O8  O8  O 0 1 N N N 17.479 -16.530 6.857  3.507  0.582  -2.160 O8  I60 30 
I60 C17 C17 C 0 1 N N S 15.500 -16.450 5.466  2.718  2.081  -0.463 C17 I60 31 
I60 N7  N7  N 0 1 N N N 14.488 -16.510 6.519  1.347  1.625  -0.550 N7  I60 32 
I60 H1  H1  H 0 1 N N N 11.670 -9.232  10.178 4.087  -5.335 1.545  H1  I60 33 
I60 H2  H2  H 0 1 N N N 10.716 -10.395 10.812 5.421  -5.234 0.556  H2  I60 34 
I60 H4  H4  H 0 1 N N N 12.344 -11.354 9.372  4.352  -3.543 -0.780 H4  I60 35 
I60 H5  H5  H 0 1 N N N 13.607 -10.577 10.385 3.426  -5.063 -0.778 H5  I60 36 
I60 H6  H6  H 0 1 N N N 13.458 -12.130 12.009 1.991  -4.186 1.045  H6  I60 37 
I60 H7  H7  H 0 1 N N N 11.682 -12.318 11.822 2.917  -2.666 1.043  H7  I60 38 
I60 H8  H8  H 0 1 N N N 13.092 -14.346 11.276 2.268  -2.274 -1.318 H8  I60 39 
I60 H9  H9  H 0 1 N N N 13.710 -13.435 9.857  1.342  -3.794 -1.316 H9  I60 40 
I60 H10 H10 H 0 1 N N N 12.655 -15.702 9.275  -0.311 -1.746 -1.895 H10 I60 41 
I60 H11 H11 H 0 1 N N N 10.244 -14.898 7.790  -1.880 -1.475 0.554  H11 I60 42 
I60 H12 H12 H 0 1 N N N 9.341  -15.972 9.743  -3.036 -2.019 -1.552 H12 I60 43 
I60 H13 H13 H 0 1 N N N 11.206 -17.258 10.274 -2.974 -0.375 -3.284 H13 I60 44 
I60 H14 H14 H 0 1 N N N 8.156  -17.882 8.583  -4.698 -0.145 -1.532 H14 I60 45 
I60 H15 H15 H 0 1 N N N 6.082  -13.728 8.312  -5.616 -1.763 2.404  H15 I60 46 
I60 H16 H16 H 0 1 N N N 7.078  -13.973 6.915  -7.132 -1.147 2.023  H16 I60 47 
I60 H17 H17 H 0 1 N N N 10.104 -18.714 7.315  -3.096 1.725  -1.394 H17 I60 48 
I60 H18 H18 H 0 1 N N N 8.107  -17.536 5.336  -5.433 1.995  -0.510 H18 I60 49 
I60 H19 H19 H 0 1 N N N 7.865  -19.056 6.261  -4.830 1.582  1.113  H19 I60 50 
I60 H20 H20 H 0 1 N N N 8.967  -19.406 4.231  -4.841 3.942  0.740  H20 I60 51 
I60 H21 H21 H 0 1 N N N 12.075 -17.288 7.482  -0.831 0.954  -0.971 H21 I60 52 
I60 H22 H22 H 0 1 N N N 13.795 -13.756 5.031  2.079  1.095  2.516  H22 I60 53 
I60 H23 H23 H 0 1 N N N 16.127 -14.565 6.326  3.587  0.211  0.331  H23 I60 54 
I60 H24 H24 H 0 1 N N N 17.745 -15.236 2.861  5.939  3.123  0.448  H24 I60 55 
I60 H25 H25 H 0 1 N N N 17.813 -17.469 3.711  5.514  2.931  -1.801 H25 I60 56 
I60 H26 H26 H 0 1 N N N 18.838 -16.480 4.806  5.653  1.223  -1.378 H26 I60 57 
I60 H27 H27 H 0 1 N N N 16.834 -18.123 5.674  3.382  2.629  -2.416 H27 I60 58 
I60 H28 H28 H 0 1 N N N 16.920 -16.768 7.587  4.074  0.398  -2.921 H28 I60 59 
I60 H29 H29 H 0 1 N N N 15.076 -16.808 4.516  2.727  3.125  -0.149 H29 I60 60 
I60 H30 H30 H 0 1 N N N 14.471 -17.100 7.326  0.758  1.714  -1.315 H30 I60 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I60 O7  C14 DOUB N N 1  
I60 N6  C14 SING N N 2  
I60 N6  C15 SING N N 3  
I60 C14 C13 SING N N 4  
I60 C15 C16 SING N N 5  
I60 O5  C10 SING N N 6  
I60 C13 N5  SING N N 7  
I60 C13 C17 SING N N 8  
I60 N5  C12 SING N N 9  
I60 C17 C16 SING N N 10 
I60 C17 N7  SING N N 11 
I60 C16 O8  SING N N 12 
I60 C10 C9  SING N N 13 
I60 C12 N4  DOUB N N 14 
I60 C12 N7  SING N N 15 
I60 O6  C9  SING N N 16 
I60 O6  C11 SING N N 17 
I60 N4  C11 SING N N 18 
I60 C9  C7  SING N N 19 
I60 C11 C5  SING N N 20 
I60 O3  C7  SING N N 21 
I60 O3  C8  SING N N 22 
I60 N3  C8  SING N N 23 
I60 C7  C6  SING N N 24 
I60 C5  C6  SING N N 25 
I60 C5  N2  SING N N 26 
I60 C8  O4  DOUB N N 27 
I60 C6  O2  SING N N 28 
I60 N2  C4  SING N N 29 
I60 O1  C4  DOUB N N 30 
I60 C4  C3  SING N N 31 
I60 C1  N1  SING N N 32 
I60 C1  C2  SING N N 33 
I60 C3  C2  SING N N 34 
I60 N1  H1  SING N N 35 
I60 N1  H2  SING N N 36 
I60 C1  H4  SING N N 37 
I60 C1  H5  SING N N 38 
I60 C2  H6  SING N N 39 
I60 C2  H7  SING N N 40 
I60 C3  H8  SING N N 41 
I60 C3  H9  SING N N 42 
I60 N2  H10 SING N N 43 
I60 C5  H11 SING N N 44 
I60 C6  H12 SING N N 45 
I60 O2  H13 SING N N 46 
I60 C7  H14 SING N N 47 
I60 N3  H15 SING N N 48 
I60 N3  H16 SING N N 49 
I60 C9  H17 SING N N 50 
I60 C10 H18 SING N N 51 
I60 C10 H19 SING N N 52 
I60 O5  H20 SING N N 53 
I60 C11 H21 SING N N 54 
I60 N5  H22 SING N N 55 
I60 C13 H23 SING N N 56 
I60 N6  H24 SING N N 57 
I60 C15 H25 SING N N 58 
I60 C15 H26 SING N N 59 
I60 C16 H27 SING N N 60 
I60 O8  H28 SING N N 61 
I60 C17 H29 SING N N 62 
I60 N7  H30 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I60 InChI            InChI                1.03  "InChI=1S/C17H29N7O8/c18-3-1-2-8(27)21-11-12(28)13(32-16(19)30)7(5-25)31-15(11)24-17-22-9-6(26)4-20-14(29)10(9)23-17/h6-7,9-13,15,25-26,28H,1-5,18H2,(H2,19,30)(H,20,29)(H,21,27)(H2,22,23,24)/t6-,7-,9-,10+,11-,12+,13+,15-/m1/s1" 
I60 InChIKey         InChI                1.03  UHTCYHBBFSVFGP-JUFPZOJRSA-N                                                                                                                                                                                                         
I60 SMILES_CANONICAL CACTVS               3.385 "NCCCC(=O)N[C@@H]1[C@H](O)[C@@H](OC(N)=O)[C@@H](CO)O[C@H]1N=C2N[C@@H]3[C@H](O)CNC(=O)[C@H]3N2"                                                                                                                                      
I60 SMILES           CACTVS               3.385 "NCCCC(=O)N[CH]1[CH](O)[CH](OC(N)=O)[CH](CO)O[CH]1N=C2N[CH]3[CH](O)CNC(=O)[CH]3N2"                                                                                                                                                  
I60 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]2[C@@H](C(=O)N1)N/C(=N/[C@H]3[C@@H]([C@@H]([C@H]([C@H](O3)CO)OC(=O)N)O)NC(=O)CCCN)/N2)O"                                                                                                                             
I60 SMILES           "OpenEye OEToolkits" 2.0.7 "C1C(C2C(C(=O)N1)NC(=NC3C(C(C(C(O3)CO)OC(=O)N)O)NC(=O)CCCN)N2)O"                                                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           I60 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(4-azanylbutanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I60 "Create component" 2022-06-10 PDBJ 
I60 "Initial release"  2023-05-31 RCSB 
# 
