data_E40
#

_chem_comp.id                                   E40
_chem_comp.name                                 "(2R)-4-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-N-hydroxy-2-{[(4'-methoxybiphenyl-4-yl)sulfonyl](propan-2-yloxy)amino}butanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H29 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        EN140
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-11-22
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       567.610
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    E40
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4WZV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E40  O13  O1   O  0  1  N  N  N   5.734   7.815  25.971   2.361   3.361  -0.979  O13  E40   1  
E40  S13  S1   S  0  1  N  N  N   5.176   8.677  24.926   1.960   2.730   0.230  S13  E40   2  
E40  O14  O2   O  0  1  N  N  N   5.766  10.013  25.025   2.184   3.296   1.514  O14  E40   3  
E40  C28  C1   C  0  1  Y  N  N   5.642   7.846  23.397   0.223   2.465   0.099  C28  E40   4  
E40  C14  C2   C  0  1  Y  N  N   5.633   6.458  23.348  -0.542   2.330   1.244  C14  E40   5  
E40  C17  C3   C  0  1  Y  N  N   6.028   5.801  22.201  -1.903   2.122   1.148  C17  E40   6  
E40  C16  C4   C  0  1  Y  N  N   6.427   6.527  21.091  -2.507   2.049  -0.106  C16  E40   7  
E40  C21  C5   C  0  1  Y  N  N   6.942   5.788  19.871  -3.969   1.821  -0.216  C21  E40   8  
E40  C26  C6   C  0  1  Y  N  N   6.243   4.523  19.395  -4.742   1.684   0.936  C26  E40   9  
E40  C25  C7   C  0  1  Y  N  N   6.714   3.861  18.368  -6.101   1.472   0.830  C25  E40  10  
E40  C24  C8   C  0  1  Y  N  N   7.994   4.343  17.694  -6.698   1.395  -0.421  C24  E40  11  
E40  O24  O3   O  0  1  N  N  N   8.500   3.629  16.611  -8.036   1.180  -0.521  O24  E40  12  
E40  C61  C9   C  0  1  N  N  N   8.076   2.316  16.421  -8.766   1.050   0.700  C61  E40  13  
E40  C23  C10  C  0  1  Y  N  N   8.622   5.417  18.121  -5.930   1.530  -1.569  C23  E40  14  
E40  C30  C11  C  0  1  Y  N  N   8.068   6.184  19.316  -4.572   1.748  -1.470  C30  E40  15  
E40  C15  C12  C  0  1  Y  N  N   6.451   7.906  21.143  -1.732   2.186  -1.256  C15  E40  16  
E40  C29  C13  C  0  1  Y  N  N   6.063   8.565  22.290  -0.373   2.398  -1.148  C29  E40  17  
E40  N12  N1   N  0  1  N  N  N   3.494   8.825  25.142   2.683   1.241   0.242  N12  E40  18  
E40  O15  O4   O  0  1  N  N  N   2.837   7.618  24.904   3.178   0.704   1.456  O15  E40  19  
E40  C67  C14  C  0  1  N  N  N   2.632   6.732  25.976   4.482   1.169   1.808  C67  E40  20  
E40  C69  C15  C  0  1  N  N  N   1.934   5.496  25.436   4.412   1.926   3.136  C69  E40  21  
E40  C68  C16  C  0  1  N  N  N   1.735   7.361  27.046   5.428  -0.025   1.951  C68  E40  22  
E40  C31  C17  C  0  1  N  N  R   2.910   9.920  24.377   2.812   0.478  -1.002  C31  E40  23  
E40  C11  C18  C  0  1  N  N  N   2.756   9.611  22.884   4.264   0.406  -1.399  C11  E40  24  
E40  O2   O5   O  0  1  N  N  N   2.013   8.766  22.498   5.126   0.725  -0.608  O2   E40  25  
E40  N2   N2   N  0  1  N  N  N   3.399  10.459  21.901   4.605  -0.013  -2.634  N2   E40  26  
E40  O7   O6   O  0  1  N  N  N   3.257  10.105  20.563   5.969  -0.081  -3.007  O7   E40  27  
E40  C32  C19  C  0  1  N  N  N   1.549  10.153  24.995   2.270  -0.937  -0.792  C32  E40  28  
E40  C33  C20  C  0  1  N  N  N   0.990  11.453  24.456   0.777  -0.868  -0.465  C33  E40  29  
E40  N48  N3   N  0  1  N  N  N   0.130  11.211  23.324   0.275  -2.215  -0.185  N48  E40  30  
E40  C52  C21  C  0  1  N  N  N   0.113  11.978  22.103   0.170  -2.748   1.046  C52  E40  31  
E40  O54  O7   O  0  1  N  N  N   0.872  12.849  21.800   0.472  -2.196   2.085  O54  E40  32  
E40  C49  C22  C  0  1  N  N  N  -0.985  10.285  23.239  -0.147  -3.081  -1.124  C49  E40  33  
E40  O53  O8   O  0  1  N  N  N  -1.323   9.484  24.047  -0.171  -2.873  -2.320  O53  E40  34  
E40  C50  C23  C  0  1  Y  N  N  -1.670  10.494  21.911  -0.575  -4.329  -0.456  C50  E40  35  
E40  C51  C24  C  0  1  Y  N  N  -1.048  11.469  21.264  -0.373  -4.117   0.923  C51  E40  36  
E40  C55  C25  C  0  1  Y  N  N  -2.882   9.791  21.313  -1.086  -5.537  -0.900  C55  E40  37  
E40  C56  C26  C  0  1  Y  N  N  -3.310  10.158  20.124  -1.393  -6.531   0.016  C56  E40  38  
E40  C57  C27  C  0  1  Y  N  N  -2.587  11.279  19.386  -1.193  -6.325   1.368  C57  E40  39  
E40  C58  C28  C  0  1  Y  N  N  -1.547  11.886  19.895  -0.686  -5.119   1.827  C58  E40  40  
E40  H1   H1   H  0  1  N  N  N   5.316   5.891  24.211  -0.072   2.387   2.215  H1   E40  41  
E40  H2   H2   H  0  1  N  N  N   6.026   4.721  22.169  -2.499   2.017   2.043  H2   E40  42  
E40  H3   H3   H  0  1  N  N  N   5.358   4.171  19.904  -4.279   1.744   1.909  H3   E40  43  
E40  H4   H4   H  0  1  N  N  N   6.202   2.983  18.002  -6.701   1.367   1.722  H4   E40  44  
E40  H5   H5   H  0  1  N  N  N   8.566   1.897  15.529  -9.820   0.883   0.478  H5   E40  45  
E40  H6   H6   H  0  1  N  N  N   8.342   1.714  17.302  -8.376   0.206   1.268  H6   E40  46  
E40  H7   H7   H  0  1  N  N  N   6.985   2.300  16.282  -8.659   1.963   1.286  H7   E40  47  
E40  H8   H8   H  0  1  N  N  N   9.523   5.753  17.629  -6.397   1.469  -2.541  H8   E40  48  
E40  H9   H9   H  0  1  N  N  N   8.594   7.044  19.704  -3.974   1.854  -2.364  H9   E40  49  
E40  H10  H10  H  0  1  N  N  N   6.775   8.471  20.282  -2.195   2.130  -2.230  H10  E40  50  
E40  H11  H11  H  0  1  N  N  N   6.087   9.644  22.326   0.229   2.504  -2.039  H11  E40  51  
E40  H12  H12  H  0  1  N  N  N   3.589   6.439  26.433   4.853   1.836   1.029  H12  E40  52  
E40  H13  H13  H  0  1  N  N  N   1.761   4.784  26.256   5.410   1.995   3.568  H13  E40  53  
E40  H14  H14  H  0  1  N  N  N   0.970   5.784  24.991   4.021   2.929   2.962  H14  E40  54  
E40  H15  H15  H  0  1  N  N  N   2.565   5.024  24.669   3.754   1.394   3.823  H15  E40  55  
E40  H16  H16  H  0  1  N  N  N   1.592   6.648  27.871   5.478  -0.564   1.005  H16  E40  56  
E40  H17  H17  H  0  1  N  N  N   2.210   8.276  27.431   6.423   0.330   2.220  H17  E40  57  
E40  H18  H18  H  0  1  N  N  N   0.759   7.612  26.605   5.057  -0.691   2.730  H18  E40  58  
E40  H19  H19  H  0  1  N  N  N   3.521  10.827  24.493   2.244   0.971  -1.791  H19  E40  59  
E40  H20  H20  H  0  1  N  N  N   3.923  11.266  22.173   3.916  -0.268  -3.267  H20  E40  60  
E40  H21  H21  H  0  1  N  N  N   2.677   9.356  20.493   6.115  -0.393  -3.911  H21  E40  61  
E40  H22  H22  H  0  1  N  N  N   0.876   9.323  24.733   2.416  -1.521  -1.700  H22  E40  62  
E40  H23  H23  H  0  1  N  N  N   1.645  10.216  26.089   2.801  -1.410   0.034  H23  E40  63  
E40  H24  H24  H  0  1  N  N  N   1.822  12.102  24.144   0.625  -0.234   0.409  H24  E40  64  
E40  H25  H25  H  0  1  N  N  N   0.412  11.953  25.247   0.238  -0.449  -1.315  H25  E40  65  
E40  H26  H26  H  0  1  N  N  N  -3.382   9.003  21.857  -1.245  -5.704  -1.955  H26  E40  66  
E40  H27  H27  H  0  1  N  N  N  -4.164   9.671  19.676  -1.792  -7.474  -0.329  H27  E40  67  
E40  H28  H28  H  0  1  N  N  N  -2.945  11.581  18.413  -1.437  -7.107   2.072  H28  E40  68  
E40  H29  H29  H  0  1  N  N  N  -1.050  12.674  19.348  -0.531  -4.963   2.884  H29  E40  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E40  C61  O24  SING  N  N   1  
E40  O24  C24  SING  N  N   2  
E40  C24  C23  DOUB  Y  N   3  
E40  C24  C25  SING  Y  N   4  
E40  C23  C30  SING  Y  N   5  
E40  C25  C26  DOUB  Y  N   6  
E40  C30  C21  DOUB  Y  N   7  
E40  C57  C58  DOUB  Y  N   8  
E40  C57  C56  SING  Y  N   9  
E40  C26  C21  SING  Y  N  10  
E40  C21  C16  SING  N  N  11  
E40  C58  C51  SING  Y  N  12  
E40  C56  C55  DOUB  Y  N  13  
E40  O7   N2   SING  N  N  14  
E40  C16  C15  DOUB  Y  N  15  
E40  C16  C17  SING  Y  N  16  
E40  C15  C29  SING  Y  N  17  
E40  C51  C50  DOUB  Y  N  18  
E40  C51  C52  SING  N  N  19  
E40  C55  C50  SING  Y  N  20  
E40  O54  C52  DOUB  N  N  21  
E40  N2   C11  SING  N  N  22  
E40  C50  C49  SING  N  N  23  
E40  C52  N48  SING  N  N  24  
E40  C17  C14  DOUB  Y  N  25  
E40  C29  C28  DOUB  Y  N  26  
E40  O2   C11  DOUB  N  N  27  
E40  C11  C31  SING  N  N  28  
E40  C49  N48  SING  N  N  29  
E40  C49  O53  DOUB  N  N  30  
E40  N48  C33  SING  N  N  31  
E40  C14  C28  SING  Y  N  32  
E40  C28  S13  SING  N  N  33  
E40  C31  C32  SING  N  N  34  
E40  C31  N12  SING  N  N  35  
E40  C33  C32  SING  N  N  36  
E40  O15  N12  SING  N  N  37  
E40  O15  C67  SING  N  N  38  
E40  S13  O14  DOUB  N  N  39  
E40  S13  N12  SING  N  N  40  
E40  S13  O13  DOUB  N  N  41  
E40  C69  C67  SING  N  N  42  
E40  C67  C68  SING  N  N  43  
E40  C14  H1   SING  N  N  44  
E40  C17  H2   SING  N  N  45  
E40  C26  H3   SING  N  N  46  
E40  C25  H4   SING  N  N  47  
E40  C61  H5   SING  N  N  48  
E40  C61  H6   SING  N  N  49  
E40  C61  H7   SING  N  N  50  
E40  C23  H8   SING  N  N  51  
E40  C30  H9   SING  N  N  52  
E40  C15  H10  SING  N  N  53  
E40  C29  H11  SING  N  N  54  
E40  C67  H12  SING  N  N  55  
E40  C69  H13  SING  N  N  56  
E40  C69  H14  SING  N  N  57  
E40  C69  H15  SING  N  N  58  
E40  C68  H16  SING  N  N  59  
E40  C68  H17  SING  N  N  60  
E40  C68  H18  SING  N  N  61  
E40  C31  H19  SING  N  N  62  
E40  N2   H20  SING  N  N  63  
E40  O7   H21  SING  N  N  64  
E40  C32  H22  SING  N  N  65  
E40  C32  H23  SING  N  N  66  
E40  C33  H24  SING  N  N  67  
E40  C33  H25  SING  N  N  68  
E40  C55  H26  SING  N  N  69  
E40  C56  H27  SING  N  N  70  
E40  C57  H28  SING  N  N  71  
E40  C58  H29  SING  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E40  SMILES            ACDLabs               12.01  "O=S(=O)(c2ccc(c1ccc(OC)cc1)cc2)N(OC(C)C)C(C(=O)NO)CCN4C(=O)c3ccccc3C4=O"  
E40  InChI             InChI                 1.03   "InChI=1S/C28H29N3O8S/c1-18(2)39-31(40(36,37)22-14-10-20(11-15-22)19-8-12-21(38-3)13-9-19)25(26(32)29-35)16-17-30-27(33)23-6-4-5-7-24(23)28(30)34/h4-15,18,25,35H,16-17H2,1-3H3,(H,29,32)/t25-/m1/s1"  
E40  InChIKey          InChI                 1.03   WQCXDERWRJMJQA-RUZDIDTESA-N  
E40  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc(cc1)c2ccc(cc2)[S](=O)(=O)N(OC(C)C)[C@H](CCN3C(=O)c4ccccc4C3=O)C(=O)NO"  
E40  SMILES            CACTVS                3.385  "COc1ccc(cc1)c2ccc(cc2)[S](=O)(=O)N(OC(C)C)[CH](CCN3C(=O)c4ccccc4C3=O)C(=O)NO"  
E40  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "CC(C)ON([C@H](CCN1C(=O)c2ccccc2C1=O)C(=O)NO)S(=O)(=O)c3ccc(cc3)c4ccc(cc4)OC"  
E40  SMILES            "OpenEye OEToolkits"  1.9.2  "CC(C)ON(C(CCN1C(=O)c2ccccc2C1=O)C(=O)NO)S(=O)(=O)c3ccc(cc3)c4ccc(cc4)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
E40  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-4-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-N-hydroxy-2-{[(4'-methoxybiphenyl-4-yl)sulfonyl](propan-2-yloxy)amino}butanamide"  
E40  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(2R)-4-[1,3-bis(oxidanylidene)isoindol-2-yl]-2-[[4-(4-methoxyphenyl)phenyl]sulfonyl-propan-2-yloxy-amino]-N-oxidanyl-butanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E40  "Create component"  2014-11-22  EBI   
E40  "Initial release"   2015-08-26  RCSB  
E40  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     E40
_pdbx_chem_comp_synonyms.name        EN140
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
