data_BD0
# 
_chem_comp.id                                    BD0 
_chem_comp.name                                  "[(2~{R})-2-[4-[[3,3-bis(fluoranyl)pyrrolidin-1-yl]methyl]phenyl]pyrrolidin-1-yl]-[5-chloranyl-2,4-bis(oxidanyl)phenyl]methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H23 Cl F2 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "1-{4-[(2R)-1-(5-chloro-2,4-dihydroxybenzoyl)pyrrolidin-2-yl]benzyl}-3,3-difluoropyrrolidinium" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-05-11 
_chem_comp.pdbx_modified_date                    2023-05-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        436.879 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     BD0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3HEK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
BD0 C4  C1  C  0 1 Y N N 16.969 -0.410 48.848 3.418  1.060  1.862  C4  BD0 1  
BD0 C6  C2  C  0 1 Y N N 16.142 -1.476 49.316 2.887  0.311  0.801  C6  BD0 2  
BD0 C7  C3  C  0 1 Y N N 14.778 -1.244 49.658 3.267  0.603  -0.512 C7  BD0 3  
BD0 C8  C4  C  0 1 Y N N 14.241 0.059  49.540 4.158  1.622  -0.760 C8  BD0 4  
BD0 C10 C5  C  0 1 N N N 16.714 -2.839 49.451 1.934  -0.780 1.071  C10 BD0 5  
BD0 N12 N1  N  0 1 N N N 17.031 -3.332 50.739 1.972  -1.906 0.330  N12 BD0 6  
BD0 C13 C6  C  0 1 N N N 17.624 -4.665 50.818 2.977  -2.223 -0.700 C13 BD0 7  
BD0 C15 C7  C  0 1 N N N 17.880 -3.597 52.956 1.472  -4.093 -0.595 C15 BD0 8  
BD0 C17 C8  C  0 1 Y N N 15.741 -2.455 52.805 -0.366 -2.544 0.074  C17 BD0 9  
BD0 C20 C9  C  0 1 Y N N 13.321 -2.078 54.304 -2.911 -1.675 -0.569 C20 BD0 10 
BD0 C21 C10 C  0 1 N N N 12.060 -1.904 55.118 -4.298 -1.196 -0.915 C21 BD0 11 
BD0 C24 C11 C  0 1 N N N 9.044  -0.936 53.216 -4.737 2.418  -0.504 C24 BD0 12 
BD0 C28 C12 C  0 1 N N N 9.871  -1.044 55.491 -6.035 0.386  -0.279 C28 BD0 13 
BD0 O1  O1  O  0 1 N N N 14.587 2.395  48.958 5.562  3.369  0.042  O1  BD0 14 
BD0 C2  C13 C  0 1 Y N N 15.062 1.123  49.081 4.683  2.365  0.294  C2  BD0 15 
BD0 C3  C14 C  0 1 Y N N 16.425 0.898  48.730 4.313  2.083  1.601  C3  BD0 16 
BD0 O5  O2  O  0 1 N N N 18.287 -0.646 48.516 3.050  0.787  3.139  O5  BD0 17 
BD0 CL9 CL1 CL 0 0 N N N 12.595 0.311  49.967 4.628  1.983  -2.391 CL9 BD0 18 
BD0 O11 O3  O  0 1 N N N 16.911 -3.459 48.408 1.114  -0.665 1.961  O11 BD0 19 
BD0 C14 C15 C  0 1 N N N 17.845 -4.966 52.286 2.977  -3.770 -0.791 C14 BD0 20 
BD0 C16 C16 C  0 1 N N R 17.073 -2.625 52.054 1.020  -3.023 0.421  C16 BD0 21 
BD0 C18 C17 C  0 1 Y N N 14.687 -3.428 52.760 -0.550 -1.651 -0.965 C18 BD0 22 
BD0 C19 C18 C  0 1 Y N N 13.497 -3.242 53.499 -1.822 -1.216 -1.286 C19 BD0 23 
BD0 N22 N2  N  0 1 N N N 10.975 -1.105 54.546 -4.601 0.020  -0.150 N22 BD0 24 
BD0 C23 C19 C  0 1 N N N 10.399 -1.616 53.288 -3.841 1.177  -0.670 C23 BD0 25 
BD0 C25 C20 C  0 1 N N N 8.732  -0.569 54.653 -6.054 1.887  0.108  C25 BD0 26 
BD0 F26 F1  F  0 1 N N N 7.569  -1.117 55.070 -7.159 2.533  -0.456 F26 BD0 27 
BD0 F27 F2  F  0 1 N N N 8.617  0.766  54.772 -6.050 2.039  1.499  F27 BD0 28 
BD0 C29 C21 C  0 1 Y N N 14.354 -1.098 54.350 -2.727 -2.564 0.474  C29 BD0 29 
BD0 C30 C22 C  0 1 Y N N 15.552 -1.281 53.610 -1.455 -3.003 0.792  C30 BD0 30 
BD0 H1  H1  H  0 1 N N N 14.159 -2.058 50.005 2.862  0.028  -1.332 H1  BD0 31 
BD0 H2  H2  H  0 1 N N N 16.942 -5.408 50.379 2.691  -1.787 -1.657 H2  BD0 32 
BD0 H3  H3  H  0 1 N N N 18.583 -4.684 50.280 3.959  -1.862 -0.396 H3  BD0 33 
BD0 H4  H4  H  0 1 N N N 18.919 -3.249 53.050 0.930  -3.991 -1.535 H4  BD0 34 
BD0 H5  H5  H  0 1 N N N 17.421 -3.654 53.954 1.342  -5.094 -0.184 H5  BD0 35 
BD0 H6  H6  H  0 1 N N N 11.657 -2.908 55.315 -4.350 -0.977 -1.982 H6  BD0 36 
BD0 H7  H7  H  0 1 N N N 12.348 -1.431 56.069 -5.022 -1.972 -0.667 H7  BD0 37 
BD0 H8  H8  H  0 1 N N N 9.093  -0.036 52.586 -4.269 3.136  0.170  H8  BD0 38 
BD0 H9  H9  H  0 1 N N N 8.284  -1.623 52.816 -4.930 2.878  -1.474 H9  BD0 39 
BD0 H10 H10 H  0 1 N N N 9.661  -2.036 55.917 -6.376 0.250  -1.305 H10 BD0 40 
BD0 H11 H11 H  0 1 N N N 10.086 -0.334 56.304 -6.645 -0.199 0.409  H11 BD0 41 
BD0 H12 H12 H  0 1 N N N 13.674 2.419  49.219 5.145  4.230  -0.098 H12 BD0 42 
BD0 H13 H13 H  0 1 N N N 17.039 1.714  48.378 4.723  2.662  2.415  H13 BD0 43 
BD0 H14 H14 H  0 1 N N N 18.488 -1.564 48.651 3.613  0.135  3.579  H14 BD0 44 
BD0 H15 H15 H  0 1 N N N 17.020 -5.574 52.687 3.324  -4.104 -1.769 H15 BD0 45 
BD0 H16 H16 H  0 1 N N N 18.797 -5.496 52.435 3.577  -4.208 0.006  H16 BD0 46 
BD0 H17 H17 H  0 1 N N N 17.594 -1.660 51.970 1.028  -3.436 1.429  H17 BD0 47 
BD0 H18 H18 H  0 1 N N N 14.805 -4.314 52.153 0.301  -1.292 -1.525 H18 BD0 48 
BD0 H19 H19 H  0 1 N N N 12.716 -3.986 53.454 -1.965 -0.518 -2.098 H19 BD0 49 
BD0 H21 H21 H  0 1 N N N 10.288 -2.710 53.322 -3.608 1.025  -1.724 H21 BD0 50 
BD0 H22 H22 H  0 1 N N N 11.025 -1.337 52.427 -2.921 1.304  -0.098 H22 BD0 51 
BD0 H23 H23 H  0 1 N N N 14.225 -0.210 54.951 -3.577 -2.915 1.041  H23 BD0 52 
BD0 H24 H24 H  0 1 N N N 16.328 -0.531 53.653 -1.313 -3.704 1.600  H24 BD0 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BD0 O11 C10 DOUB N N 1  
BD0 O5  C4  SING N N 2  
BD0 C3  C4  DOUB Y N 3  
BD0 C3  C2  SING Y N 4  
BD0 C4  C6  SING Y N 5  
BD0 O1  C2  SING N N 6  
BD0 C2  C8  DOUB Y N 7  
BD0 C6  C10 SING N N 8  
BD0 C6  C7  DOUB Y N 9  
BD0 C10 N12 SING N N 10 
BD0 C8  C7  SING Y N 11 
BD0 C8  CL9 SING N N 12 
BD0 N12 C13 SING N N 13 
BD0 N12 C16 SING N N 14 
BD0 C13 C14 SING N N 15 
BD0 C16 C17 SING N N 16 
BD0 C16 C15 SING N N 17 
BD0 C14 C15 SING N N 18 
BD0 C18 C17 DOUB Y N 19 
BD0 C18 C19 SING Y N 20 
BD0 C17 C30 SING Y N 21 
BD0 C24 C23 SING N N 22 
BD0 C24 C25 SING N N 23 
BD0 C23 N22 SING N N 24 
BD0 C19 C20 DOUB Y N 25 
BD0 C30 C29 DOUB Y N 26 
BD0 C20 C29 SING Y N 27 
BD0 C20 C21 SING N N 28 
BD0 N22 C21 SING N N 29 
BD0 N22 C28 SING N N 30 
BD0 C25 F27 SING N N 31 
BD0 C25 F26 SING N N 32 
BD0 C25 C28 SING N N 33 
BD0 C7  H1  SING N N 34 
BD0 C13 H2  SING N N 35 
BD0 C13 H3  SING N N 36 
BD0 C15 H4  SING N N 37 
BD0 C15 H5  SING N N 38 
BD0 C21 H6  SING N N 39 
BD0 C21 H7  SING N N 40 
BD0 C24 H8  SING N N 41 
BD0 C24 H9  SING N N 42 
BD0 C28 H10 SING N N 43 
BD0 C28 H11 SING N N 44 
BD0 O1  H12 SING N N 45 
BD0 C3  H13 SING N N 46 
BD0 O5  H14 SING N N 47 
BD0 C14 H15 SING N N 48 
BD0 C14 H16 SING N N 49 
BD0 C16 H17 SING N N 50 
BD0 C18 H18 SING N N 51 
BD0 C19 H19 SING N N 52 
BD0 C23 H21 SING N N 53 
BD0 C23 H22 SING N N 54 
BD0 C29 H23 SING N N 55 
BD0 C30 H24 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
BD0 InChI            InChI                1.06  "InChI=1S/C22H23ClF2N2O3/c23-17-10-16(19(28)11-20(17)29)21(30)27-8-1-2-18(27)15-5-3-14(4-6-15)12-26-9-7-22(24,25)13-26/h3-6,10-11,18,28-29H,1-2,7-9,12-13H2/t18-/m1/s1" 
BD0 InChIKey         InChI                1.06  MKPBMJPMGDZEOP-GOSISDBHSA-N                                                                                                                                             
BD0 SMILES_CANONICAL CACTVS               3.385 "Oc1cc(O)c(cc1Cl)C(=O)N2CCC[C@@H]2c3ccc(CN4CCC(F)(F)C4)cc3"                                                                                                             
BD0 SMILES           CACTVS               3.385 "Oc1cc(O)c(cc1Cl)C(=O)N2CCC[CH]2c3ccc(CN4CCC(F)(F)C4)cc3"                                                                                                               
BD0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCC(C2)(F)F)[C@H]3CCCN3C(=O)c4cc(c(cc4O)O)Cl"                                                                                                              
BD0 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN2CCC(C2)(F)F)C3CCCN3C(=O)c4cc(c(cc4O)O)Cl"                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           BD0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R})-2-[4-[[3,3-bis(fluoranyl)pyrrolidin-1-yl]methyl]phenyl]pyrrolidin-1-yl]-[5-chloranyl-2,4-bis(oxidanyl)phenyl]methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
BD0 "Create component"     2009-05-11 RCSB 
BD0 "Modify aromatic_flag" 2011-06-04 RCSB 
BD0 "Modify descriptor"    2011-06-04 RCSB 
BD0 "Modify synonyms"      2020-06-05 PDBE 
# 
