data_9U0
#

_chem_comp.id                                   9U0
_chem_comp.name                                 "N6-({[(1S,2E)-cyclooct-2-en-1-yl]oxy}carbonyl)-L-lysine"
_chem_comp.type                                 "peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C15 H26 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              LYS
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-31
_chem_comp.pdbx_modified_date                   2019-04-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       298.378
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9U0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6AAO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9U0  C15   C1   C  0  1  N  N  N  263.535  34.516  138.425   4.303   0.666  -0.171  C15   9U0   1  
9U0  C17   C2   C  0  1  N  N  N  263.600  36.685  136.996   6.272   2.053   0.125  C17   9U0   2  
9U0  C20   C3   C  0  1  N  N  N  262.590  37.043  140.094   6.143  -1.268  -0.027  C20   9U0   3  
9U0  C21   C4   C  0  1  N  N  N  263.414  35.762  140.462   4.735  -1.592  -0.571  C21   9U0   4  
9U0  OXT   O1   O  0  1  N  Y  N  257.328  34.834  147.258  -7.576   1.291  -1.297  OXT   9U0   5  
9U0  C     C5   C  0  1  N  N  N  257.159  35.732  146.255  -7.299   0.319  -0.414  C     9U0   6  
9U0  O     O2   O  0  1  N  N  N  257.513  37.047  146.422  -8.043  -0.627  -0.303  O     9U0   7  
9U0  CA    C6   C  0  1  N  N  S  256.611  35.173  144.961  -6.060   0.408   0.439  CA    9U0   8  
9U0  N     N1   N  0  1  N  N  N  256.104  36.223  144.074  -6.210  -0.464   1.612  N     9U0   9  
9U0  CB    C7   C  0  1  N  N  N  257.765  34.455  144.278  -4.846  -0.040  -0.377  CB    9U0  10  
9U0  CG    C8   C  0  1  N  N  N  257.471  34.108  142.823  -3.573   0.167   0.447  CG    9U0  11  
9U0  CD    C9   C  0  1  N  N  N  258.513  33.093  142.320  -2.359  -0.280  -0.370  CD    9U0  12  
9U0  CE    C10  C  0  1  N  N  N  259.940  33.666  142.137  -1.086  -0.073   0.454  CE    9U0  13  
9U0  NZ    N2   N  0  1  N  N  N  260.935  32.590  141.827   0.076  -0.502  -0.328  NZ    9U0  14  
9U0  C11   C11  C  0  1  N  N  N  262.371  32.927  141.577   1.314  -0.411   0.199  C11   9U0  15  
9U0  O12   O3   O  0  1  N  N  N  263.114  32.986  142.467   1.465   0.027   1.322  O12   9U0  16  
9U0  O13   O4   O  0  1  N  N  N  263.122  33.220  140.371   2.382  -0.804  -0.519  O13   9U0  17  
9U0  C14   C12  C  0  1  N  N  S  262.872  34.503  139.747   3.684  -0.678   0.112  C14   9U0  18  
9U0  C16   C13  C  0  1  N  N  N  262.997  35.358  137.347   5.130   1.203   0.619  C16   9U0  19  
9U0  C18   C14  C  0  1  N  N  N  262.901  37.918  137.568   7.364   0.959  -0.009  C18   9U0  20  
9U0  C19   C15  C  0  1  N  N  N  263.198  38.072  139.086   6.839  -0.202  -0.880  C19   9U0  21  
9U0  HC15  H1   H  0  0  N  N  N  264.411  33.909  138.252   4.036   1.184  -1.080  HC15  9U0  22  
9U0  H3    H3   H  0  1  N  N  N  264.638  36.689  137.360   6.042   2.506  -0.839  H3    9U0  23  
9U0  H4    H4   H  0  1  N  N  N  263.596  36.776  135.900   6.552   2.807   0.860  H4    9U0  24  
9U0  H5    H5   H  0  1  N  N  N  262.400  37.585  141.032   6.055  -0.911   0.999  H5    9U0  25  
9U0  H6    H6   H  0  1  N  N  N  261.635  36.701  139.669   6.745  -2.177  -0.036  H6    9U0  26  
9U0  H7    H7   H  0  1  N  N  N  263.360  35.605  141.549   4.715  -1.425  -1.648  H7    9U0  27  
9U0  H8    H8   H  0  1  N  N  N  264.462  35.916  140.166   4.498  -2.635  -0.362  H8    9U0  28  
9U0  HXT   H9   H  0  1  N  Y  N  257.703  35.270  148.014  -8.382   1.190  -1.822  HXT   9U0  29  
9U0  HA    H10  H  0  1  N  N  N  255.813  34.449  145.184  -5.917   1.437   0.768  HA    9U0  30  
9U0  H     H11  H  0  1  N  N  N  255.345  36.698  144.519  -6.343  -1.425   1.334  H11   9U0  31  
9U0  H2    H12  H  0  1  N  Y  N  256.836  36.875  143.878  -5.419  -0.374   2.233  H12   9U0  32  
9U0  HB2   H14  H  0  1  N  N  N  257.972  33.524  144.826  -4.947  -1.095  -0.630  H14   9U0  33  
9U0  HB3   H15  H  0  1  N  N  N  258.652  35.105  144.311  -4.786   0.549  -1.292  H15   9U0  34  
9U0  HG2   H16  H  0  1  N  N  N  257.522  35.020  142.210  -3.472   1.223   0.699  H16   9U0  35  
9U0  HG3   H17  H  0  1  N  N  N  256.465  33.670  142.746  -3.632  -0.422   1.362  H17   9U0  36  
9U0  HD2   H18  H  0  1  N  N  N  258.172  32.705  141.349  -2.460  -1.336  -0.623  H18   9U0  37  
9U0  HD3   H19  H  0  1  N  N  N  258.566  32.268  143.046  -2.299   0.308  -1.285  H19   9U0  38  
9U0  HE2   H20  H  0  1  N  N  N  260.242  34.174  143.065  -0.985   0.982   0.707  H20   9U0  39  
9U0  HE3   H21  H  0  1  N  N  N  259.929  34.391  141.309  -1.146  -0.662   1.369  H21   9U0  40  
9U0  HZ    H22  H  0  1  N  N  N  260.636  31.637  141.787  -0.044  -0.851  -1.225  H22   9U0  41  
9U0  H23   H23  H  0  1  N  N  N  261.789  34.633  139.603   3.623  -0.870   1.183  H23   9U0  42  
9U0  H24   H24  H  0  1  N  N  N  262.140  35.010  136.790   5.014   1.048   1.681  H24   9U0  43  
9U0  H26   H26  H  0  1  N  N  N  263.260  38.813  137.039   8.251   1.389  -0.474  H26   9U0  44  
9U0  H27   H27  H  0  1  N  N  N  261.815  37.816  137.422   7.621   0.582   0.981  H27   9U0  45  
9U0  H28   H28  H  0  1  N  N  N  264.291  38.030  139.205   7.678  -0.657  -1.408  H28   9U0  46  
9U0  H29   H29  H  0  1  N  N  N  262.835  39.066  139.385   6.133   0.192  -1.611  H29   9U0  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9U0  C17  C16   SING  N  N   1  
9U0  C17  C18   SING  N  N   2  
9U0  C16  C15   DOUB  N  E   3  
9U0  C18  C19   SING  N  N   4  
9U0  C15  C14   SING  N  N   5  
9U0  C19  C20   SING  N  N   6  
9U0  C14  O13   SING  N  N   7  
9U0  C14  C21   SING  N  N   8  
9U0  C20  C21   SING  N  N   9  
9U0  O13  C11   SING  N  N  10  
9U0  C11  NZ    SING  N  N  11  
9U0  C11  O12   DOUB  N  N  12  
9U0  NZ   CE    SING  N  N  13  
9U0  CE   CD    SING  N  N  14  
9U0  CD   CG    SING  N  N  15  
9U0  CG   CB    SING  N  N  16  
9U0  N    CA    SING  N  N  17  
9U0  CB   CA    SING  N  N  18  
9U0  CA   C     SING  N  N  19  
9U0  C    O     DOUB  N  N  20  
9U0  C    OXT   SING  N  N  21  
9U0  C15  HC15  SING  N  N  22  
9U0  C17  H3    SING  N  N  23  
9U0  C17  H4    SING  N  N  24  
9U0  C20  H5    SING  N  N  25  
9U0  C20  H6    SING  N  N  26  
9U0  C21  H7    SING  N  N  27  
9U0  C21  H8    SING  N  N  28  
9U0  OXT  HXT   SING  N  N  29  
9U0  CA   HA    SING  N  N  30  
9U0  N    H     SING  N  N  31  
9U0  N    H2    SING  N  N  32  
9U0  CB   HB2   SING  N  N  33  
9U0  CB   HB3   SING  N  N  34  
9U0  CG   HG2   SING  N  N  35  
9U0  CG   HG3   SING  N  N  36  
9U0  CD   HD2   SING  N  N  37  
9U0  CD   HD3   SING  N  N  38  
9U0  CE   HE2   SING  N  N  39  
9U0  CE   HE3   SING  N  N  40  
9U0  NZ   HZ    SING  N  N  41  
9U0  C14  H23   SING  N  N  42  
9U0  C16  H24   SING  N  N  43  
9U0  C18  H26   SING  N  N  44  
9U0  C18  H27   SING  N  N  45  
9U0  C19  H28   SING  N  N  46  
9U0  C19  H29   SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9U0  SMILES            ACDLabs               12.01  "C=1C(CCCCCC=1)OC(NCCCCC(C(O)=O)N)=O"  
9U0  InChI             InChI                 1.03   "InChI=1S/C15H26N2O4/c16-13(14(18)19)10-6-7-11-17-15(20)21-12-8-4-2-1-3-5-9-12/h4,8,12-13H,1-3,5-7,9-11,16H2,(H,17,20)(H,18,19)/t12-,13+/m1/s1"  
9U0  InChIKey          InChI                 1.03   RIPRFLAPFPCYBY-OLZOCXBDSA-N  
9U0  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCCCNC(=O)O[C@H]/1CCCCC\C=C/1)C(O)=O"  
9U0  SMILES            CACTVS                3.385  "N[CH](CCCCNC(=O)O[CH]1CCCCCC=C1)C(O)=O"  
9U0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1CCC=CC(CC1)OC(=O)NCCCC[C@@H](C(=O)O)N"  
9U0  SMILES            "OpenEye OEToolkits"  2.0.6  "C1CCC=CC(CC1)OC(=O)NCCCCC(C(=O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9U0  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~6~-({[(1S,2E)-cyclooct-2-en-1-yl]oxy}carbonyl)-L-lysine"  
9U0  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{S})-2-azanyl-6-(cyclooct-2-en-1-yloxycarbonylamino)hexanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9U0  "Create component"  2018-07-31  PDBJ  
9U0  "Initial release"   2019-04-17  RCSB  
##
