data_9Q0
#

_chem_comp.id                                   9Q0
_chem_comp.name                                 "1-{5-[(1S)-2-amino-1-hydroxy-2-oxo-1-phenylethyl]-7,8-dimethyl-2,4-dioxo-1,2,3,4-tetrahydrobenzo[g]pteridine-5,10-diium-10-yl}-1-deoxy-5-O-phosphono-D-ribitol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H30 N5 O11 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   2
_chem_comp.pdbx_initial_date                    2018-06-20
_chem_comp.pdbx_modified_date                   2019-06-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       607.506
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9Q0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6A3T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9Q0  C4   C1   C  0  1  N  N  N  31.771   -8.878  23.666   3.256   2.028   0.805  C4   9Q0   1  
9Q0  C6   C2   C  0  1  Y  N  N  29.129   -8.521  27.584   2.905  -2.715  -0.037  C6   9Q0   2  
9Q0  C11  C3   C  0  1  Y  N  N  29.375   -8.857  23.502   1.148   0.784   1.232  C11  9Q0   3  
9Q0  C7   C4   C  0  1  Y  N  N  27.902   -8.741  28.207   2.139  -3.839  -0.017  C7   9Q0   4  
9Q0  C8   C5   C  0  1  Y  N  N  26.763   -8.969  27.425   0.815  -3.814   0.413  C8   9Q0   5  
9Q0  C9   C6   C  0  1  Y  N  N  26.846   -8.971  26.041   0.222  -2.664   0.835  C9   9Q0   6  
9Q0  N1   N1   N  0  1  N  N  N  29.462   -9.166  22.158   0.609   1.994   1.638  N1   9Q0   7  
9Q0  N3   N2   N  0  1  N  N  N  31.865   -9.176  22.309   2.626   3.145   1.227  N3   9Q0   8  
9Q0  C2   C7   C  0  1  N  N  N  30.701   -9.320  21.555   1.346   3.116   1.627  C2   9Q0   9  
9Q0  C4A  C8   C  0  1  Y  N  N  30.521   -8.740  24.284   2.495   0.756   0.793  C4A  9Q0  10  
9Q0  C5A  C9   C  0  1  Y  N  N  29.225   -8.571  26.201   2.351  -1.492   0.387  C5A  9Q0  11  
9Q0  C9A  C10  C  0  1  Y  N  N  28.069   -8.755  25.418   0.957  -1.467   0.839  C9A  9Q0  12  
9Q0  CAA  C11  C  0  1  N  N  N  27.821   -8.734  29.604   2.740  -5.144  -0.472  CAA  9Q0  13  
9Q0  CAH  C12  C  0  1  N  N  N  25.522   -9.193  28.018   0.018  -5.093   0.410  CAH  9Q0  14  
9Q0  CAS  C13  C  0  1  N  N  N  26.934   -8.945  23.223  -0.973  -0.269   1.703  CAS  9Q0  15  
9Q0  CAT  C14  C  0  1  N  N  S  26.489  -10.433  23.054  -1.892   0.018   0.514  CAT  9Q0  16  
9Q0  CAU  C15  C  0  1  N  N  S  25.185  -10.516  22.249  -3.351  -0.059   0.967  CAU  9Q0  17  
9Q0  CAV  C16  C  0  1  N  N  R  24.003  -10.016  23.061  -4.270   0.229  -0.222  CAV  9Q0  18  
9Q0  CAW  C17  C  0  1  N  N  N  22.788  -10.851  22.603  -5.729   0.152   0.231  CAW  9Q0  19  
9Q0  CBF  C18  C  0  1  Y  N  N  31.753   -6.234  26.666   4.707   0.843  -0.924  CBF  9Q0  20  
9Q0  CBG  C19  C  0  1  N  N  S  30.846   -6.719  25.689   4.454  -0.367  -0.063  CBG  9Q0  21  
9Q0  CBH  C20  C  0  1  N  N  N  29.740   -5.621  25.869   4.721  -1.617  -0.861  CBH  9Q0  22  
9Q0  CBJ  C21  C  0  1  Y  N  N  32.959   -5.701  26.216   3.675   1.398  -1.657  CBJ  9Q0  23  
9Q0  CBK  C22  C  0  1  Y  N  N  33.869   -5.135  27.116   3.906   2.512  -2.443  CBK  9Q0  24  
9Q0  CBL  C23  C  0  1  Y  N  N  33.578   -5.037  28.473   5.169   3.071  -2.496  CBL  9Q0  25  
9Q0  CBM  C24  C  0  1  Y  N  N  32.350   -5.510  28.919   6.201   2.516  -1.762  CBM  9Q0  26  
9Q0  CBN  C25  C  0  1  Y  N  N  31.439   -6.080  28.024   5.971   1.402  -0.977  CBN  9Q0  27  
9Q0  N10  N3   N  1  1  Y  N  N  28.153   -8.767  24.058   0.418  -0.313   1.245  N10  9Q0  28  
9Q0  N5   N4   N  1  1  Y  N  N  30.347   -8.287  25.544   3.059  -0.363   0.386  N5   9Q0  29  
9Q0  NBP  N5   N  0  1  N  N  N  29.934   -4.556  25.075   3.994  -1.880  -1.964  NBP  9Q0  30  
9Q0  O2   O1   O  0  1  N  N  N  30.765   -9.595  20.354   0.830   4.153   1.997  O2   9Q0  31  
9Q0  O4   O2   O  0  1  N  N  N  32.818   -8.751  24.300   4.414   2.065   0.440  O4   9Q0  32  
9Q0  OAX  O3   O  0  1  N  N  N  21.670  -10.477  23.370  -6.588   0.305  -0.900  OAX  9Q0  33  
9Q0  OAZ  O4   O  0  1  N  N  N  19.693  -10.797  24.779  -8.835   0.608  -2.232  OAZ  9Q0  34  
9Q0  OBA  O5   O  0  1  N  N  N  21.982  -11.199  25.746  -8.674  -1.186  -0.317  OBA  9Q0  35  
9Q0  OBB  O6   O  0  1  N  N  N  21.044  -12.831  24.054  -8.642   1.286   0.191  OBB  9Q0  36  
9Q0  OBC  O7   O  0  1  N  N  N  24.272  -10.233  24.451  -3.997   1.536  -0.729  OBC  9Q0  37  
9Q0  OBD  O8   O  0  1  N  N  N  25.243   -9.735  21.035  -3.624  -1.367   1.474  OBD  9Q0  38  
9Q0  OBE  O9   O  0  1  N  N  N  27.492  -11.236  22.383  -1.619   1.326   0.007  OBE  9Q0  39  
9Q0  OBI  O10  O  0  1  N  N  N  28.874   -5.617  26.754   5.592  -2.385  -0.511  OBI  9Q0  40  
9Q0  OBO  O11  O  0  1  N  N  N  31.437   -6.170  24.482   5.320  -0.333   1.073  OBO  9Q0  41  
9Q0  PAY  P1   P  0  1  N  N  N  21.012  -11.414  24.494  -8.194   0.275  -0.793  PAY  9Q0  42  
9Q0  H1   H1   H  0  1  N  N  N  30.006   -8.311  28.178   3.929  -2.760  -0.375  H1   9Q0  43  
9Q0  H2   H2   H  0  1  N  N  N  25.960   -9.140  25.447  -0.807  -2.671   1.163  H2   9Q0  44  
9Q0  H3   H3   H  0  1  N  N  N  28.628   -9.279  21.618  -0.314   2.031   1.934  H3   9Q0  45  
9Q0  H4   H4   H  0  1  N  N  N  32.761   -9.286  21.878   3.110   3.986   1.242  H4   9Q0  46  
9Q0  H5   H5   H  0  1  N  N  N  27.992   -9.751  29.987   3.262  -5.614   0.361  H5   9Q0  47  
9Q0  H6   H6   H  0  1  N  N  N  28.585   -8.056  30.012   1.948  -5.806  -0.824  H6   9Q0  48  
9Q0  H7   H7   H  0  1  N  N  N  26.823   -8.389  29.912   3.444  -4.957  -1.283  H7   9Q0  49  
9Q0  H8   H8   H  0  1  N  N  N  25.386  -10.271  28.189   0.069  -5.555   1.396  H8   9Q0  50  
9Q0  H9   H9   H  0  1  N  N  N  25.474   -8.660  28.979  -1.021  -4.873   0.166  H9   9Q0  51  
9Q0  H10  H10  H  0  1  N  N  N  24.726   -8.824  27.354   0.430  -5.777  -0.332  H10  9Q0  52  
9Q0  H11  H11  H  0  1  N  N  N  27.135   -8.529  22.225  -1.085   0.518   2.448  H11  9Q0  53  
9Q0  H12  H12  H  0  1  N  N  N  26.109   -8.389  23.693  -1.240  -1.229   2.145  H12  9Q0  54  
9Q0  H13  H13  H  0  1  N  N  N  26.302  -10.846  24.056  -1.715  -0.719  -0.269  H13  9Q0  55  
9Q0  H14  H14  H  0  1  N  N  N  25.007  -11.571  21.994  -3.528   0.679   1.750  H14  9Q0  56  
9Q0  H15  H15  H  0  1  N  N  N  23.823   -8.952  22.850  -4.093  -0.509  -1.005  H15  9Q0  57  
9Q0  H16  H16  H  0  1  N  N  N  22.587  -10.660  21.538  -5.914  -0.815   0.699  H16  9Q0  58  
9Q0  H17  H17  H  0  1  N  N  N  22.997  -11.921  22.750  -5.930   0.947   0.949  H17  9Q0  59  
9Q0  H18  H18  H  0  1  N  N  N  33.194   -5.725  25.162   2.688   0.962  -1.616  H18  9Q0  60  
9Q0  H19  H19  H  0  1  N  N  N  34.816   -4.767  26.750   3.100   2.945  -3.016  H19  9Q0  61  
9Q0  H20  H20  H  0  1  N  N  N  34.288   -4.604  29.162   5.350   3.940  -3.110  H20  9Q0  62  
9Q0  H21  H21  H  0  1  N  N  N  32.097   -5.437  29.966   7.188   2.953  -1.803  H21  9Q0  63  
9Q0  H22  H22  H  0  1  N  N  N  30.476   -6.408  28.386   6.776   0.971  -0.401  H22  9Q0  64  
9Q0  H23  H23  H  0  1  N  N  N  29.373   -3.736  25.192   3.348  -1.232  -2.286  H23  9Q0  65  
9Q0  H24  H24  H  0  1  N  N  N  30.640   -4.582  24.367   4.116  -2.718  -2.437  H24  9Q0  66  
9Q0  H25  H25  H  0  1  N  N  N  19.006  -11.436  24.631  -9.802   0.607  -2.242  H25  9Q0  67  
9Q0  H26  H26  H  0  1  N  N  N  22.397  -12.024  25.971  -8.415  -1.900  -0.916  H26  9Q0  68  
9Q0  H27  H27  H  0  1  N  N  N  23.538   -9.923  24.968  -4.134   2.245  -0.085  H27  9Q0  69  
9Q0  H28  H28  H  0  1  N  N  N  24.419   -9.813  20.568  -3.487  -2.075   0.830  H28  9Q0  70  
9Q0  H29  H29  H  0  1  N  N  N  28.307  -11.196  22.869  -1.756   2.034   0.651  H29  9Q0  71  
9Q0  H30  H30  H  0  1  N  N  N  32.022   -6.811  24.096   5.203   0.446   1.634  H30  9Q0  72  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9Q0  O2   C2   DOUB  N  N   1  
9Q0  OBD  CAU  SING  N  N   2  
9Q0  C2   N1   SING  N  N   3  
9Q0  C2   N3   SING  N  N   4  
9Q0  N1   C11  SING  N  N   5  
9Q0  CAU  CAT  SING  N  N   6  
9Q0  CAU  CAV  SING  N  N   7  
9Q0  N3   C4   SING  N  N   8  
9Q0  OBE  CAT  SING  N  N   9  
9Q0  CAW  CAV  SING  N  N  10  
9Q0  CAW  OAX  SING  N  N  11  
9Q0  CAT  CAS  SING  N  N  12  
9Q0  CAV  OBC  SING  N  N  13  
9Q0  CAS  N10  SING  N  N  14  
9Q0  OAX  PAY  SING  N  N  15  
9Q0  C11  N10  DOUB  Y  N  16  
9Q0  C11  C4A  SING  Y  N  17  
9Q0  C4   C4A  SING  N  N  18  
9Q0  C4   O4   DOUB  N  N  19  
9Q0  OBB  PAY  DOUB  N  N  20  
9Q0  N10  C9A  SING  Y  N  21  
9Q0  C4A  N5   DOUB  Y  N  22  
9Q0  OBO  CBG  SING  N  N  23  
9Q0  PAY  OAZ  SING  N  N  24  
9Q0  PAY  OBA  SING  N  N  25  
9Q0  NBP  CBH  SING  N  N  26  
9Q0  C9A  C9   DOUB  Y  N  27  
9Q0  C9A  C5A  SING  Y  N  28  
9Q0  N5   CBG  SING  N  N  29  
9Q0  N5   C5A  SING  Y  N  30  
9Q0  CBG  CBH  SING  N  N  31  
9Q0  CBG  CBF  SING  N  N  32  
9Q0  CBH  OBI  DOUB  N  N  33  
9Q0  C9   C8   SING  Y  N  34  
9Q0  C5A  C6   DOUB  Y  N  35  
9Q0  CBJ  CBF  DOUB  Y  N  36  
9Q0  CBJ  CBK  SING  Y  N  37  
9Q0  CBF  CBN  SING  Y  N  38  
9Q0  CBK  CBL  DOUB  Y  N  39  
9Q0  C8   CAH  SING  N  N  40  
9Q0  C8   C7   DOUB  Y  N  41  
9Q0  C6   C7   SING  Y  N  42  
9Q0  CBN  CBM  DOUB  Y  N  43  
9Q0  C7   CAA  SING  N  N  44  
9Q0  CBL  CBM  SING  Y  N  45  
9Q0  C6   H1   SING  N  N  46  
9Q0  C9   H2   SING  N  N  47  
9Q0  N1   H3   SING  N  N  48  
9Q0  N3   H4   SING  N  N  49  
9Q0  CAA  H5   SING  N  N  50  
9Q0  CAA  H6   SING  N  N  51  
9Q0  CAA  H7   SING  N  N  52  
9Q0  CAH  H8   SING  N  N  53  
9Q0  CAH  H9   SING  N  N  54  
9Q0  CAH  H10  SING  N  N  55  
9Q0  CAS  H11  SING  N  N  56  
9Q0  CAS  H12  SING  N  N  57  
9Q0  CAT  H13  SING  N  N  58  
9Q0  CAU  H14  SING  N  N  59  
9Q0  CAV  H15  SING  N  N  60  
9Q0  CAW  H16  SING  N  N  61  
9Q0  CAW  H17  SING  N  N  62  
9Q0  CBJ  H18  SING  N  N  63  
9Q0  CBK  H19  SING  N  N  64  
9Q0  CBL  H20  SING  N  N  65  
9Q0  CBM  H21  SING  N  N  66  
9Q0  CBN  H22  SING  N  N  67  
9Q0  NBP  H23  SING  N  N  68  
9Q0  NBP  H24  SING  N  N  69  
9Q0  OAZ  H25  SING  N  N  70  
9Q0  OBA  H26  SING  N  N  71  
9Q0  OBC  H27  SING  N  N  72  
9Q0  OBD  H28  SING  N  N  73  
9Q0  OBE  H29  SING  N  N  74  
9Q0  OBO  H30  SING  N  N  75  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9Q0  SMILES            ACDLabs               12.01  "C4(c2c([n+](c1cc(c(cc1[n+]2C(c3ccccc3)(C(=O)N)O)C)C)CC(C(C(O)COP(O)(O)=O)O)O)NC(N4)=O)=O"  
9Q0  InChI             InChI                 1.03   "InChI=1S/C25H28N5O11P/c1-12-8-15-16(9-13(12)2)30(25(37,23(26)35)14-6-4-3-5-7-14)19-21(27-24(36)28-22(19)34)29(15)10-17(31)20(33)18(32)11-41-42(38,39)40/h3-9,17-18,20,31-33,37H,10-11H2,1-2H3,(H4-,26,28,34,35,36,38,39,40)/p+2/t17-,18+,20-,25-/m0/s1"  
9Q0  InChIKey          InChI                 1.03   RQJITHUTOAFSKP-NOEFBULQSA-P  
9Q0  SMILES_CANONICAL  CACTVS                3.385  "Cc1cc2c(cc1C)[n+](c3C(=O)NC(=O)Nc3[n+]2C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)[C@@](O)(C(N)=O)c4ccccc4"  
9Q0  SMILES            CACTVS                3.385  "Cc1cc2c(cc1C)[n+](c3C(=O)NC(=O)Nc3[n+]2C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)[C](O)(C(N)=O)c4ccccc4"  
9Q0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "Cc1cc2c(cc1C)[n+](c3c([n+]2C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)NC(=O)NC3=O)[C@](c4ccccc4)(C(=O)N)O"  
9Q0  SMILES            "OpenEye OEToolkits"  2.0.6  "Cc1cc2c(cc1C)[n+](c3c([n+]2CC(C(C(COP(=O)(O)O)O)O)O)NC(=O)NC3=O)C(c4ccccc4)(C(=O)N)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9Q0  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-{5-[(1S)-2-amino-1-hydroxy-2-oxo-1-phenylethyl]-7,8-dimethyl-2,4-dioxo-1,2,3,4-tetrahydrobenzo[g]pteridine-5,10-diium-10-yl}-1-deoxy-5-O-phosphono-D-ribitol"  
9Q0  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "[(2~{R},3~{S},4~{S})-5-[5-[(1~{S})-2-azanyl-1-oxidanyl-2-oxidanylidene-1-phenyl-ethyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridine-5,10-diium-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9Q0  "Create component"  2018-06-20  PDBJ  
9Q0  "Initial release"   2019-06-19  RCSB  
##
