data_9L0
# 
_chem_comp.id                                    9L0 
_chem_comp.name                                  "(4R)-8-(1,3-dimethyl-1H-pyrazol-5-yl)-5-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}imidazo[1,2-c]pyrimidine-2-carbonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H18 F N7 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         MRTX-1919 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-20 
_chem_comp.pdbx_modified_date                    2022-11-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        403.412 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9L0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7SI5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9L0 C11 C1  C 0 1 Y N N -15.488 -24.320 22.513 -0.046 0.169  0.223  C11 9L0 1  
9L0 C13 C2  C 0 1 N N N -13.751 -24.172 20.859 -2.297 1.132  0.438  C13 9L0 2  
9L0 C16 C3  C 0 1 N N N -11.291 -24.798 22.744 -4.127 0.759  -2.103 C16 9L0 3  
9L0 C19 C4  C 0 1 Y N N -11.269 -26.931 21.724 -5.776 0.063  -0.599 C19 9L0 4  
9L0 C17 C5  C 0 1 N N N -10.291 -25.768 23.449 -5.530 0.774  -2.754 C17 9L0 5  
9L0 C20 C6  C 0 1 Y N N -11.625 -27.971 20.894 -6.346 -0.225 0.638  C20 9L0 6  
9L0 C21 C7  C 0 1 Y N N -12.704 -27.761 20.049 -5.610 -0.075 1.795  C21 9L0 7  
9L0 C22 C8  C 0 1 Y N N -13.362 -26.548 20.073 -4.298 0.363  1.737  C22 9L0 8  
9L0 C26 C9  C 0 1 Y N N -18.975 -24.508 22.945 1.750  -2.875 -0.085 C26 9L0 9  
9L0 C28 C10 C 0 1 Y N N -17.222 -24.439 24.187 2.132  -0.741 0.010  C28 9L0 10 
9L0 C29 C11 C 0 1 N N N -20.346 -24.575 22.624 1.974  -4.286 -0.183 C29 9L0 11 
9L0 C01 C12 C 0 1 N N N -18.112 -22.419 26.705 3.987  3.418  -0.239 C01 9L0 12 
9L0 C04 C13 C 0 1 Y N N -16.645 -24.861 28.767 6.319  0.656  -0.136 C04 9L0 13 
9L0 C05 C14 C 0 1 N N N -16.459 -25.470 30.126 7.687  0.025  -0.156 C05 9L0 14 
9L0 C06 C15 C 0 1 Y N N -16.047 -25.288 27.564 5.109  -0.028 -0.018 C06 9L0 15 
9L0 C07 C16 C 0 1 Y N N -16.525 -24.440 26.603 4.096  0.906  -0.041 C07 9L0 16 
9L0 C08 C17 C 0 1 Y N N -16.204 -24.416 25.186 2.648  0.632  0.050  C08 9L0 17 
9L0 C09 C18 C 0 1 Y N N -14.929 -24.343 24.746 1.731  1.662  0.177  C09 9L0 18 
9L0 C14 C19 C 0 1 Y N N -13.011 -25.497 20.900 -3.725 0.655  0.509  C14 9L0 19 
9L0 C15 C20 C 0 1 Y N N -11.930 -25.715 21.724 -4.461 0.508  -0.645 C15 9L0 20 
9L0 C25 C21 C 0 1 Y N N -17.957 -24.447 22.060 0.537  -2.263 0.040  C25 9L0 21 
9L0 F23 F1  F 0 1 N N N -14.425 -26.397 19.247 -3.580 0.507  2.872  F23 9L0 22 
9L0 N02 N1  N 0 1 Y N N -17.352 -23.545 27.214 4.683  2.131  -0.171 N02 9L0 23 
9L0 N03 N2  N 0 1 Y N N -17.424 -23.817 28.565 6.069  1.938  -0.221 N03 9L0 24 
9L0 N10 N3  N 0 1 Y N N -14.587 -24.297 23.428 0.429  1.392  0.257  N10 9L0 25 
9L0 N12 N4  N 0 1 N N N -15.167 -24.289 21.217 -1.403 -0.021 0.306  N12 9L0 26 
9L0 N24 N5  N 0 1 Y N N -16.813 -24.401 22.847 0.770  -0.920 0.100  N24 9L0 27 
9L0 N27 N6  N 0 1 Y N N -18.518 -24.516 24.255 2.703  -1.919 -0.101 N27 9L0 28 
9L0 N30 N7  N 0 1 N N N -21.449 -24.628 22.365 2.151  -5.405 -0.260 N30 9L0 29 
9L0 O18 O1  O 0 1 N N N -10.217 -26.971 22.603 -6.311 -0.024 -1.849 O18 9L0 30 
9L0 H1  H1  H 0 1 N N N -13.268 -23.480 21.565 -2.176 1.787  -0.425 H1  9L0 31 
9L0 H2  H2  H 0 1 N N N -13.681 -23.764 19.840 -2.052 1.680  1.347  H2  9L0 32 
9L0 H3  H3  H 0 1 N N N -10.766 -23.962 22.260 -3.519 -0.050 -2.508 H3  9L0 33 
9L0 H4  H4  H 0 1 N N N -12.035 -24.403 23.452 -3.628 1.719  -2.230 H4  9L0 34 
9L0 H5  H5  H 0 1 N N N -10.658 -26.030 24.452 -5.920 1.791  -2.807 H5  9L0 35 
9L0 H6  H6  H 0 1 N N N -9.299  -25.299 23.532 -5.501 0.322  -3.746 H6  9L0 36 
9L0 H7  H7  H 0 1 N N N -11.088 -28.908 20.901 -7.369 -0.567 0.692  H7  9L0 37 
9L0 H8  H8  H 0 1 N N N -13.028 -28.542 19.376 -6.060 -0.300 2.751  H8  9L0 38 
9L0 H9  H9  H 0 1 N N N -18.654 -21.938 27.532 3.718  3.740  0.767  H9  9L0 39 
9L0 H10 H10 H 0 1 N N N -17.427 -21.692 26.244 4.641  4.161  -0.695 H10 9L0 40 
9L0 H11 H11 H 0 1 N N N -18.832 -22.773 25.952 3.084  3.312  -0.840 H11 9L0 41 
9L0 H12 H12 H 0 1 N N N -17.057 -24.913 30.863 7.964  -0.210 -1.184 H12 9L0 42 
9L0 H13 H13 H 0 1 N N N -16.787 -26.520 30.105 8.414  0.719  0.267  H13 9L0 43 
9L0 H14 H14 H 0 1 N N N -15.396 -25.424 30.406 7.674  -0.891 0.435  H14 9L0 44 
9L0 H15 H15 H 0 1 N N N -15.359 -26.109 27.430 4.989  -1.097 0.074  H15 9L0 45 
9L0 H16 H16 H 0 1 N N N -14.137 -24.320 25.480 2.072  2.687  0.210  H16 9L0 46 
9L0 H17 H17 H 0 1 N N N -18.018 -24.436 20.982 -0.426 -2.750 0.083  H17 9L0 47 
9L0 H18 H18 H 0 1 N N N -15.641 -23.507 20.812 -1.769 -0.918 0.278  H18 9L0 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9L0 F23 C22 SING N N 1  
9L0 C21 C22 DOUB Y N 2  
9L0 C21 C20 SING Y N 3  
9L0 C22 C14 SING Y N 4  
9L0 C13 C14 SING N N 5  
9L0 C13 N12 SING N N 6  
9L0 C20 C19 DOUB Y N 7  
9L0 C14 C15 DOUB Y N 8  
9L0 N12 C11 SING N N 9  
9L0 C19 C15 SING Y N 10 
9L0 C19 O18 SING N N 11 
9L0 C15 C16 SING N N 12 
9L0 C25 N24 SING Y N 13 
9L0 C25 C26 DOUB Y N 14 
9L0 N30 C29 TRIP N N 15 
9L0 C11 N24 SING Y N 16 
9L0 C11 N10 DOUB Y N 17 
9L0 O18 C17 SING N N 18 
9L0 C29 C26 SING N N 19 
9L0 C16 C17 SING N N 20 
9L0 N24 C28 SING Y N 21 
9L0 C26 N27 SING Y N 22 
9L0 N10 C09 SING Y N 23 
9L0 C28 N27 DOUB Y N 24 
9L0 C28 C08 SING Y N 25 
9L0 C09 C08 DOUB Y N 26 
9L0 C08 C07 SING N N 27 
9L0 C07 N02 SING Y N 28 
9L0 C07 C06 DOUB Y N 29 
9L0 C01 N02 SING N N 30 
9L0 N02 N03 SING Y N 31 
9L0 C06 C04 SING Y N 32 
9L0 N03 C04 DOUB Y N 33 
9L0 C04 C05 SING N N 34 
9L0 C13 H1  SING N N 35 
9L0 C13 H2  SING N N 36 
9L0 C16 H3  SING N N 37 
9L0 C16 H4  SING N N 38 
9L0 C17 H5  SING N N 39 
9L0 C17 H6  SING N N 40 
9L0 C20 H7  SING N N 41 
9L0 C21 H8  SING N N 42 
9L0 C01 H9  SING N N 43 
9L0 C01 H10 SING N N 44 
9L0 C01 H11 SING N N 45 
9L0 C05 H12 SING N N 46 
9L0 C05 H13 SING N N 47 
9L0 C05 H14 SING N N 48 
9L0 C06 H15 SING N N 49 
9L0 C09 H16 SING N N 50 
9L0 C25 H17 SING N N 51 
9L0 N12 H18 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9L0 SMILES           ACDLabs              12.01 "Cc1cc(n(C)n1)c1cnc(NCc2c(F)ccc3OCCc23)n2cc(C#N)nc12"                                                                                                        
9L0 InChI            InChI                1.03  "InChI=1S/C21H18FN7O/c1-12-7-18(28(2)27-12)16-10-25-21(29-11-13(8-23)26-20(16)29)24-9-15-14-5-6-30-19(14)4-3-17(15)22/h3-4,7,10-11H,5-6,9H2,1-2H3,(H,24,25)" 
9L0 InChIKey         InChI                1.03  WUFADHRATSOXBZ-UHFFFAOYSA-N                                                                                                                                  
9L0 SMILES_CANONICAL CACTVS               3.385 "Cn1nc(C)cc1c2cnc(NCc3c(F)ccc4OCCc34)n5cc(nc25)C#N"                                                                                                          
9L0 SMILES           CACTVS               3.385 "Cn1nc(C)cc1c2cnc(NCc3c(F)ccc4OCCc34)n5cc(nc25)C#N"                                                                                                          
9L0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(n(n1)C)c2cnc(n3c2nc(c3)C#N)NCc4c(ccc5c4CCO5)F"                                                                                                        
9L0 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(n(n1)C)c2cnc(n3c2nc(c3)C#N)NCc4c(ccc5c4CCO5)F"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9L0 "SYSTEMATIC NAME" ACDLabs              12.01 "(4R)-8-(1,3-dimethyl-1H-pyrazol-5-yl)-5-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}imidazo[1,2-c]pyrimidine-2-carbonitrile" 
9L0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "8-(2,5-dimethylpyrazol-3-yl)-5-[(5-fluoranyl-2,3-dihydro-1-benzofuran-4-yl)methylamino]imidazo[1,2-c]pyrimidine-2-carbonitrile"         
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9L0 "Create component" 2021-10-20 RCSB 
9L0 "Initial release"  2022-11-09 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      9L0 
_pdbx_chem_comp_synonyms.name         MRTX-1919 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         "compound number" 
# 
