data_840
#

_chem_comp.id                                   840
_chem_comp.name                                 "Platensimycin A1"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H25 N O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-me
thanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-07-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       455.457
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    840
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3I8P
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
840  C1    C1    C  0  1  N  N  N  -4.961  68.513  68.323  -1.307   1.110   0.135  C1    840   1  
840  C2    C2    C  0  1  N  N  N  -4.075  69.411  69.130  -0.013   1.788  -0.233  C2    840   2  
840  C3    C3    C  0  1  N  N  N  -2.671  68.818  69.143   1.161   0.872   0.119  C3    840   3  
840  C4    C4    C  0  1  N  N  S  -1.742  69.709  70.002   2.472   1.559  -0.254  C4    840   4  
840  C5    C5    C  0  1  N  N  N  -1.966  69.685  71.535   2.523   1.816  -1.750  C5    840   5  
840  C6    C6    C  0  1  N  N  N  -1.387  70.803  72.331   3.237   0.917  -2.655  C6    840   6  
840  C7    C7    C  0  1  N  N  N  -0.490  71.683  71.856   3.955  -0.116  -2.193  C7    840   7  
840  C8    C8    C  0  1  N  N  S   0.084  71.648  70.450   3.976  -0.430  -0.767  C8    840   8  
840  C9    C9    C  0  1  N  N  S  -0.628  70.634  69.416   3.706   0.792   0.142  C9    840   9  
840  C10   C10   C  0  1  N  N  R  -0.440  71.121  67.899   3.735   0.157   1.536  C10   840  10  
840  C11   C11   C  0  1  N  N  N   0.900  71.224  67.266   5.017   0.087   2.360  C11   840  11  
840  C12   C12   C  0  1  N  N  R   0.736  71.999  68.566   4.746  -1.024   1.349  C12   840  12  
840  C13   C13   C  0  1  N  N  N   1.484  72.201  69.845   5.309  -0.886  -0.116  C13   840  13  
840  C14   C14   C  0  1  N  N  R  -0.667  73.071  70.043   3.061  -1.602  -0.359  C14   840  14  
840  C15   C15   C  0  1  N  N  R  -0.458  73.003  68.594   3.438  -1.822   1.139  C15   840  15  
840  O16   O16   O  0  1  N  N  N  -1.298  72.278  67.600   2.746  -0.823   1.918  O16   840  16  
840  C17   C17   C  0  1  N  N  N  -0.103  74.349  67.920   3.397  -3.266   1.642  C17   840  17  
840  C18   C18   C  0  1  N  N  N  -0.789  68.494  70.200   2.499   2.935   0.456  C18   840  18  
840  O19   O19   O  0  1  N  N  N  -2.668  68.791  72.037   1.954   2.794  -2.204  O19   840  19  
840  O20   O20   O  0  1  N  N  N  -5.465  67.509  68.825  -1.292   0.002   0.630  O20   840  20  
840  C21   C21   C  0  1  N  N  N  -5.791  64.833  64.240  -5.416  -2.156  -0.670  C21   840  21  
840  C22   C22   C  0  1  Y  N  N  -6.243  66.190  64.688  -5.145  -0.832  -0.089  C22   840  22  
840  C23   C23   C  0  1  Y  N  N  -5.512  66.880  65.676  -3.936  -0.176  -0.364  C23   840  23  
840  C24   C24   C  0  1  Y  N  N  -5.935  68.164  66.065  -3.689   1.074   0.189  C24   840  24  
840  C25   C25   C  0  1  Y  N  N  -7.039  68.745  65.507  -4.641   1.670   1.011  C25   840  25  
840  C26   C26   C  0  1  Y  N  N  -7.777  68.063  64.527  -5.839   1.018   1.282  C26   840  26  
840  C27   C27   C  0  1  Y  N  N  -7.376  66.807  64.130  -6.096  -0.219   0.735  C27   840  27  
840  N28   N28   N  0  1  N  N  N  -5.156  68.859  67.066  -2.481   1.736  -0.081  N28   840  28  
840  O30   O30   O  0  1  N  N  N  -7.428  69.974  65.872  -4.399   2.892   1.552  O30   840  29  
840  O31   O31   O  0  1  N  N  N  -4.395  66.404  66.295  -3.010  -0.762  -1.166  O31   840  30  
840  O32   O32   O  0  1  N  N  N  -4.748  64.355  64.678  -6.579  -2.784  -0.404  O32   840  31  
840  O33   O33   O  0  1  N  N  N  -6.572  64.316  63.355  -4.591  -2.685  -1.389  O33   840  32  
840  O34   O34   O  0  1  N  N  N   0.008  74.125  70.621   3.391  -2.774  -1.123  O34   840  33  
840  H2    H2    H  0  1  N  N  N  -4.052  70.414  68.680  -0.003   1.997  -1.303  H2    840  34  
840  H2A   H2A   H  0  1  N  N  N  -4.458  69.486  70.159   0.078   2.723   0.320  H2A   840  35  
840  H3    H3    H  0  1  N  N  N  -2.705  67.805  69.570   1.152   0.664   1.189  H3    840  36  
840  H3A   H3A   H  0  1  N  N  N  -2.284  68.770  68.114   1.071  -0.063  -0.435  H3A   840  37  
840  H6    H6    H  0  1  N  N  N  -1.709  70.913  73.356   3.186   1.088  -3.724  H6    840  38  
840  H7    H7    H  0  1  N  N  N  -0.155  72.468  72.518   4.501  -0.743  -2.885  H7    840  39  
840  H9    H9    H  0  1  N  N  N  -0.180  69.650  69.212   4.584   1.485   0.075  H9    840  40  
840  H11   H11   H  0  1  N  N  N   1.610  70.415  67.041   5.800   0.805   2.119  H11   840  41  
840  H11A  H11A  H  0  0  N  N  N   1.154  71.613  66.269   4.913  -0.159   3.417  H11A  840  42  
840  H13   H13   H  0  1  N  N  N   1.854  73.199  70.122   5.646  -1.837  -0.520  H13   840  43  
840  H13A  H13A  H  0  0  N  N  N   2.423  71.660  70.032   6.070  -0.112  -0.191  H13A  840  44  
840  H14   H14   H  0  1  N  N  N  -1.713  73.205  70.356   2.009  -1.385  -0.483  H14   840  45  
840  H17   H17   H  0  1  N  N  N  -0.972  75.022  67.964   3.570  -3.281   2.718  H17   840  46  
840  H17A  H17A  H  0  0  N  N  N   0.745  74.811  68.447   2.420  -3.698   1.426  H17A  840  47  
840  H17B  H17B  H  0  0  N  N  N   0.171  74.172  66.869   4.170  -3.848   1.141  H17B  840  48  
840  H18   H18   H  0  1  N  N  N   0.065  68.795  70.824   2.440   2.788   1.534  H18   840  49  
840  H18A  H18A  H  0  0  N  N  N  -1.334  67.677  70.695   3.426   3.453   0.209  H18A  840  50  
840  H18B  H18B  H  0  0  N  N  N  -0.425  68.151  69.221   1.650   3.531   0.123  H18B  840  51  
840  H26   H26   H  0  1  N  N  N  -8.652  68.519  64.088  -6.573   1.486   1.921  H26   840  52  
840  H27   H27   H  0  1  N  N  N  -7.944  66.285  63.374  -7.030  -0.718   0.945  H27   840  53  
840  HN28  HN28  H  0  0  N  N  N  -4.712  69.704  66.769  -2.491   2.643  -0.423  HN28  840  54  
840  HO30  HO30  H  0  0  N  N  N  -8.207  70.217  65.386  -4.591   3.630   0.957  HO30  840  55  
840  HO31  HO31  H  0  0  N  N  N  -4.431  66.616  67.220  -3.111  -0.547  -2.104  HO31  840  56  
840  HO32  HO32  H  0  0  N  N  N  -4.584  63.517  64.262  -6.712  -3.652  -0.808  HO32  840  57  
840  HO34  HO34  H  0  0  N  N  N  -0.420  74.941  70.389   2.849  -3.547  -0.912  HO34  840  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
840  N28  C1    SING  N  N   1  
840  C1   O20   DOUB  N  N   2  
840  C1   C2    SING  N  N   3  
840  C2   C3    SING  N  N   4  
840  C2   H2    SING  N  N   5  
840  C2   H2A   SING  N  N   6  
840  C3   C4    SING  N  N   7  
840  C3   H3    SING  N  N   8  
840  C3   H3A   SING  N  N   9  
840  C9   C4    SING  N  N  10  
840  C4   C18   SING  N  N  11  
840  C4   C5    SING  N  N  12  
840  C5   O19   DOUB  N  N  13  
840  C5   C6    SING  N  N  14  
840  C7   C6    DOUB  N  N  15  
840  C6   H6    SING  N  N  16  
840  C8   C7    SING  N  N  17  
840  C7   H7    SING  N  N  18  
840  C9   C8    SING  N  N  19  
840  C13  C8    SING  N  N  20  
840  C14  C8    SING  N  N  21  
840  C10  C9    SING  N  N  22  
840  C9   H9    SING  N  N  23  
840  C11  C10   SING  N  N  24  
840  O16  C10   SING  N  N  25  
840  C10  C12   SING  N  N  26  
840  C11  C12   SING  N  N  27  
840  C11  H11   SING  N  N  28  
840  C11  H11A  SING  N  N  29  
840  C12  C15   SING  N  N  30  
840  C12  C13   SING  N  N  31  
840  C13  H13   SING  N  N  32  
840  C13  H13A  SING  N  N  33  
840  C15  C14   SING  N  N  34  
840  C14  O34   SING  N  N  35  
840  C14  H14   SING  N  N  36  
840  O16  C15   SING  N  N  37  
840  C17  C15   SING  N  N  38  
840  C17  H17   SING  N  N  39  
840  C17  H17A  SING  N  N  40  
840  C17  H17B  SING  N  N  41  
840  C18  H18   SING  N  N  42  
840  C18  H18A  SING  N  N  43  
840  C18  H18B  SING  N  N  44  
840  O33  C21   DOUB  N  N  45  
840  C21  O32   SING  N  N  46  
840  C21  C22   SING  N  N  47  
840  C27  C22   DOUB  Y  N  48  
840  C22  C23   SING  Y  N  49  
840  C23  C24   DOUB  Y  N  50  
840  C23  O31   SING  N  N  51  
840  C25  C24   SING  Y  N  52  
840  C24  N28   SING  N  N  53  
840  C26  C25   DOUB  Y  N  54  
840  C25  O30   SING  N  N  55  
840  C27  C26   SING  Y  N  56  
840  C26  H26   SING  N  N  57  
840  C27  H27   SING  N  N  58  
840  N28  HN28  SING  N  N  59  
840  O30  HO30  SING  N  N  60  
840  O31  HO31  SING  N  N  61  
840  O32  HO32  SING  N  N  62  
840  O34  HO34  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
840  SMILES            ACDLabs               11.02  "O=C(O)c1c(O)c(c(O)cc1)NC(=O)CCC5(C(=O)C=CC43CC26C(OC2(C3O)C)(C45)C6)C"  
840  SMILES_CANONICAL  CACTVS                3.352  "C[C@]1(CCC(=O)Nc2c(O)ccc(C(O)=O)c2O)[C@@H]3[C@]4(C[C@@]56C[C@@]35O[C@@]6(C)[C@@H]4O)C=CC1=O"  
840  SMILES            CACTVS                3.352  "C[C]1(CCC(=O)Nc2c(O)ccc(C(O)=O)c2O)[CH]3[C]4(C[C]56C[C]35O[C]6(C)[CH]4O)C=CC1=O"  
840  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C[C@@]1([C@H]2[C@@]34C[C@]35CC2(C=CC1=O)[C@H]([C@@]5(O4)C)O)CCC(=O)Nc6c(ccc(c6O)C(=O)O)O"  
840  SMILES            "OpenEye OEToolkits"  1.7.0  "CC1(C2C3(CC45C2(C4)OC5(C3O)C)C=CC1=O)CCC(=O)Nc6c(ccc(c6O)C(=O)O)O"  
840  InChI             InChI                 1.03   "InChI=1S/C24H25NO8/c1-20(7-6-14(28)25-15-12(26)4-3-11(16(15)29)17(30)31)13(27)5-8-22-9-23-10-24(23,18(20)22)33-21(23,2)19(22)32/h3-5,8,18-19,26,29,32H,6-7,9-10H2,1-2H3,(H,25,28)(H,30,31)/t18-,19+,20-,21+,22-,23+,24-/m1/s1"  
840  InChIKey          InChI                 1.03   TUHIUIGYYSZKCN-ACYPNERUSA-N  
#
_pdbx_chem_comp_identifier.comp_id          840
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  11.02
_pdbx_chem_comp_identifier.identifier       "2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-methanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
840  "Create component"      2009-07-10  RCSB  
840  "Modify aromatic_flag"  2011-06-04  RCSB  
840  "Modify descriptor"     2011-06-04  RCSB  
840  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     840
_pdbx_chem_comp_synonyms.name        "2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-methanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
