data_590
# 
_chem_comp.id                                    590 
_chem_comp.name                                  "9-[2-azido-2-deoxy-5-O-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}sulfamoyl)-beta-D-arabinofuranosyl]-9H-purin-6-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H27 N11 O7 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-02-04 
_chem_comp.pdbx_modified_date                    2015-08-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        597.628 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     590 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4XTX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
590 CBI C1  C 0  1 N N S -2.270 -10.040 13.858 6.458  1.875  -0.401 CBI 590 1  
590 NAU N1  N 0  1 N N N -1.120 -9.186  13.594 6.474  1.606  1.045  NAU 590 2  
590 CBA C2  C 0  1 N N N -0.173 -9.313  14.510 7.743  1.461  1.449  CBA 590 3  
590 OAC O1  O 0  1 N N N 0.918  -8.767  14.469 8.050  1.230  2.603  OAC 590 4  
590 NAT N2  N 0  1 N N N -0.576 -10.120 15.474 8.644  1.592  0.466  NAT 590 5  
590 CBF C3  C 0  1 N N R -1.923 -10.618 15.246 7.940  1.865  -0.797 CBF 590 6  
590 CAO C4  C 0  1 N N N -2.750 -9.968  16.351 8.269  0.753  -1.812 CAO 590 7  
590 SAY S1  S 0  1 N N N -3.484 -8.563  15.603 6.942  -0.482 -1.504 SAY 590 8  
590 CBH C5  C 0  1 N N S -3.473 -9.105  13.936 5.653  0.771  -1.114 CBH 590 9  
590 CAK C6  C 0  1 N N N -3.383 -7.907  13.000 4.592  0.185  -0.181 CAK 590 10 
590 CAI C7  C 0  1 N N N -3.714 -8.308  11.568 3.731  -0.817 -0.952 CAI 590 11 
590 CAH C8  C 0  1 N N N -3.874 -7.099  10.656 2.670  -1.403 -0.019 CAH 590 12 
590 CAJ C9  C 0  1 N N N -4.326 -7.564  9.278  1.809  -2.405 -0.790 CAJ 590 13 
590 CAZ C10 C 0  1 N N N -4.707 -6.397  8.398  0.763  -2.982 0.130  CAZ 590 14 
590 OAB O2  O 0  1 N N N -5.835 -5.935  8.453  0.713  -2.627 1.288  OAB 590 15 
590 NAV N3  N 0  1 N N N -3.763 -5.924  7.585  -0.115 -3.892 -0.336 NAV 590 16 
590 SBK S2  S 0  1 N N N -4.036 -4.755  6.646  -1.263 -4.527 0.675  SBK 590 17 
590 OAD O3  O 0  1 N N N -5.153 -5.059  5.796  -2.043 -5.417 -0.112 OAD 590 18 
590 OAE O4  O 0  1 N N N -2.878 -4.532  5.826  -0.581 -4.927 1.856  OAE 590 19 
590 OAW O5  O 0  1 N N N -4.347 -3.476  7.440  -2.188 -3.387 1.078  OAW 590 20 
590 CAN C11 C 0  1 N N N -3.307 -2.658  7.979  -3.096 -2.984 0.051  CAN 590 21 
590 CBE C12 C 0  1 N N R -3.737 -1.191  7.919  -3.971 -1.839 0.564  CBE 590 22 
590 OAX O6  O 0  1 N N N -4.947 -0.959  8.651  -3.185 -0.638 0.724  OAX 590 23 
590 CAL C13 C 0  1 N N S -2.711 -0.225  8.486  -5.045 -1.471 -0.484 CAL 590 24 
590 OAL O7  O 0  1 N N N -1.815 0.210   7.462  -6.293 -2.088 -0.161 OAL 590 25 
590 CAM C14 C 0  1 N N S -3.567 0.926   8.968  -5.158 0.066  -0.382 CAM 590 26 
590 CBG C15 C 0  1 N N R -4.877 0.260   9.399  -4.139 0.445  0.716  CBG 590 27 
590 N9  N4  N 0  1 Y N N -5.004 -0.079  10.848 -3.475 1.708  0.381  N9  590 28 
590 C8  C16 C 0  1 Y N N -4.028 -0.246  11.753 -2.311 1.847  -0.314 C8  590 29 
590 N7  N5  N 0  1 Y N N -4.569 -0.555  12.951 -2.010 3.108  -0.430 N7  590 30 
590 C5  C17 C 0  1 Y N N -5.905 -0.602  12.791 -2.960 3.856  0.181  C5  590 31 
590 C4  C18 C 0  1 Y N N -6.170 -0.307  11.465 -3.914 2.967  0.704  C4  590 32 
590 N3  N6  N 0  1 Y N N -7.454 -0.286  11.033 -4.964 3.456  1.355  N3  590 33 
590 C2  C19 C 0  1 Y N N -8.455 -0.553  11.880 -5.114 4.755  1.507  C2  590 34 
590 N1  N7  N 0  1 Y N N -8.222 -0.839  13.169 -4.246 5.629  1.031  N1  590 35 
590 C6  C20 C 0  1 Y N N -6.962 -0.873  13.651 -3.160 5.233  0.374  C6  590 36 
590 N6  N8  N 0  1 N N N -6.741 -1.168  14.955 -2.257 6.156  -0.122 N6  590 37 
590 N5  N9  N -1 1 N N N -1.713 1.278   10.547 -6.090 0.382  -3.468 N5  590 38 
590 N2  N10 N 1  1 N N N -0.719 0.953   11.045 -5.443 0.538  -2.562 N2  590 39 
590 H1  H1  H 0  1 N N N -2.407 -10.831 13.106 6.020  2.852  -0.604 H1  590 40 
590 H2  H2  H 0  1 N N N -1.053 -8.572  12.808 5.691  1.545  1.615  H2  590 41 
590 H3  H3  H 0  1 N N N -0.019 -10.361 16.269 9.606  1.520  0.570  H3  590 42 
590 H4  H4  H 0  1 N N N -1.992 -11.716 15.264 8.233  2.839  -1.189 H4  590 43 
590 H5  H5  H 0  1 N N N -3.523 -10.661 16.713 8.215  1.133  -2.832 H5  590 44 
590 H6  H6  H 0  1 N N N -2.105 -9.667  17.190 9.252  0.326  -1.612 H6  590 45 
590 H7  H7  H 0  1 N N N -4.405 -9.662  13.759 5.197  1.153  -2.027 H7  590 46 
590 H8  H8  H 0  1 N N N -2.361 -7.501  13.033 5.081  -0.321 0.652  H8  590 47 
590 H9  H9  H 0  1 N N N -4.095 -7.137  13.332 3.961  0.988  0.202  H9  590 48 
590 H10 H10 H 0  1 N N N -4.654 -8.879  11.568 3.243  -0.311 -1.785 H10 590 49 
590 H11 H11 H 0  1 N N N -2.901 -8.940  11.180 4.362  -1.620 -1.334 H11 590 50 
590 H12 H12 H 0  1 N N N -2.911 -6.574  10.569 3.158  -1.909 0.814  H12 590 51 
590 H13 H13 H 0  1 N N N -4.626 -6.417  11.079 2.039  -0.600 0.364  H13 590 52 
590 H14 H14 H 0  1 N N N -5.198 -8.225  9.392  1.320  -1.898 -1.623 H14 590 53 
590 H15 H15 H 0  1 N N N -3.505 -8.119  8.801  2.439  -3.207 -1.173 H15 590 54 
590 H16 H16 H 0  1 N N N -2.856 -6.345  7.591  -0.074 -4.176 -1.262 H16 590 55 
590 H17 H17 H 0  1 N N N -3.119 -2.944  9.025  -2.534 -2.650 -0.821 H17 590 56 
590 H18 H18 H 0  1 N N N -2.388 -2.796  7.390  -3.728 -3.828 -0.226 H18 590 57 
590 H19 H19 H 0  1 N N N -3.900 -0.931  6.863  -4.442 -2.115 1.508  H19 590 58 
590 H20 H20 H 0  1 N N N -2.175 -0.686  9.329  -4.720 -1.765 -1.483 H20 590 59 
590 H21 H21 H 0  1 N N N -1.180 0.813   7.831  -7.003 -1.890 -0.787 H21 590 60 
590 H22 H22 H 0  1 N N N -3.804 1.534   8.083  -6.166 0.356  -0.085 H22 590 61 
590 N8Q N8Q N 0  1 N N N -3.106 1.477   9.761  -4.797 0.693  -1.656 N8Q 590 62 
590 H24 H24 H 0  1 N N N -5.711 0.918   9.114  -4.635 0.522  1.683  H24 590 63 
590 H25 H25 H 0  1 N N N -2.971 -0.148  11.554 -1.724 1.031  -0.709 H25 590 64 
590 H26 H26 H 0  1 N N N -9.472 -0.538  11.518 -5.979 5.120  2.041  H26 590 65 
590 H27 H27 H 0  1 N N N -7.615 -1.332  15.413 -1.474 5.856  -0.609 H27 590 66 
590 H28 H28 H 0  1 N N N -6.172 -1.988  15.019 -2.406 7.105  0.018  H28 590 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
590 OAD SBK DOUB N N 1  
590 OAE SBK DOUB N N 2  
590 SBK OAW SING N N 3  
590 SBK NAV SING N N 4  
590 OAW CAN SING N N 5  
590 OAL CAL SING N N 6  
590 NAV CAZ SING N N 7  
590 CBE CAN SING N N 8  
590 CBE CAL SING N N 9  
590 CBE OAX SING N N 10 
590 CAZ OAB DOUB N N 11 
590 CAZ CAJ SING N N 12 
590 CAL CAM SING N N 13 
590 OAX CBG SING N N 14 
590 CAM CBG SING N N 15 
590 CAJ CAH SING N N 16 
590 CBG N9  SING N N 17 
590 N5  N2  DOUB N N 18 
590 CAH CAI SING N N 19 
590 N9  C4  SING Y N 20 
590 N9  C8  SING Y N 21 
590 N3  C4  DOUB Y N 22 
590 N3  C2  SING Y N 23 
590 C4  C5  SING Y N 24 
590 CAI CAK SING N N 25 
590 C8  N7  DOUB Y N 26 
590 C2  N1  DOUB Y N 27 
590 C5  N7  SING Y N 28 
590 C5  C6  DOUB Y N 29 
590 CAK CBH SING N N 30 
590 N1  C6  SING Y N 31 
590 NAU CBI SING N N 32 
590 NAU CBA SING N N 33 
590 C6  N6  SING N N 34 
590 CBI CBH SING N N 35 
590 CBI CBF SING N N 36 
590 CBH SAY SING N N 37 
590 OAC CBA DOUB N N 38 
590 CBA NAT SING N N 39 
590 CBF NAT SING N N 40 
590 CBF CAO SING N N 41 
590 SAY CAO SING N N 42 
590 CBI H1  SING N N 43 
590 NAU H2  SING N N 44 
590 NAT H3  SING N N 45 
590 CBF H4  SING N N 46 
590 CAO H5  SING N N 47 
590 CAO H6  SING N N 48 
590 CBH H7  SING N N 49 
590 CAK H8  SING N N 50 
590 CAK H9  SING N N 51 
590 CAI H10 SING N N 52 
590 CAI H11 SING N N 53 
590 CAH H12 SING N N 54 
590 CAH H13 SING N N 55 
590 CAJ H14 SING N N 56 
590 CAJ H15 SING N N 57 
590 NAV H16 SING N N 58 
590 CAN H17 SING N N 59 
590 CAN H18 SING N N 60 
590 CBE H19 SING N N 61 
590 CAL H20 SING N N 62 
590 OAL H21 SING N N 63 
590 CAM H22 SING N N 64 
590 CAM N8Q SING N N 65 
590 CBG H24 SING N N 66 
590 C8  H25 SING N N 67 
590 C2  H26 SING N N 68 
590 N6  H27 SING N N 69 
590 N6  H28 SING N N 70 
590 N2  N8Q DOUB N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
590 SMILES           ACDLabs              12.01 "O=C1NC2C(SCC2N1)CCCCC(=O)NS(=O)(=O)OCC5OC(n3c4ncnc(N)c4nc3)C(\N=[N+]=[N-])C5O" 
590 InChI            InChI                1.03  
"InChI=1S/C20H27N11O7S2/c21-17-15-18(24-7-23-17)31(8-25-15)19-14(28-30-22)16(33)10(38-19)5-37-40(35,36)29-12(32)4-2-1-3-11-13-9(6-39-11)26-20(34)27-13/h7-11,13-14,16,19,33H,1-6H2,(H,29,32)(H2,21,23,24)(H2,26,27,34)/t9-,10+,11-,13-,14-,16+,19+/m0/s1" 
590 InChIKey         InChI                1.03  UYTYJXXHSCNPCG-ROPJLRCXSA-N 
590 SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[S](=O)(=O)NC(=O)CCCC[C@@H]4SC[C@@H]5NC(=O)N[C@H]45)[C@@H](O)[C@@H]3N=[N+]=[N-]" 
590 SMILES           CACTVS               3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[S](=O)(=O)NC(=O)CCCC[CH]4SC[CH]5NC(=O)N[CH]45)[CH](O)[CH]3N=[N+]=[N-]" 
590 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)[C@H]3C([C@@H]([C@H](O3)COS(=O)(=O)NC(=O)CCCC[C@H]4[C@@H]5[C@H](CS4)NC(=O)N5)O)N=[N+]=[N-])N" 
590 SMILES           "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COS(=O)(=O)NC(=O)CCCCC4C5C(CS4)NC(=O)N5)O)N=[N+]=[N-])N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
590 "SYSTEMATIC NAME" ACDLabs              12.01 "9-[2-azido-2-deoxy-5-O-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}sulfamoyl)-beta-D-arabinofuranosyl]-9H-purin-6-amine"                             
590 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(2R,3S,5R)-5-(6-aminopurin-9-yl)-4-azido-3-oxidanyl-oxolan-2-yl]methyl N-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoyl]sulfamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
590 "Create component" 2015-02-04 RCSB 
590 "Initial release"  2015-09-02 RCSB 
# 
