data_3Y0
# 
_chem_comp.id                                    3Y0 
_chem_comp.name                                  "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4R,5R)-3-oxidanyl-5-sulfanyl-4-tridecoxy-oxolan-2-yl]methyl hydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H49 N5 O13 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-12-09 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        757.727 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4X3O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3Y0 O2N O1  O 0 1 N N N N N N 0.303  1.278  19.000 -2.579  -4.819 -1.865 O2N 3Y0 1  
3Y0 PN  P1  P 0 1 N N N N N N 0.198  2.513  18.169 -2.154  -3.969 -0.565 PN  3Y0 2  
3Y0 O1N O2  O 0 1 N N N N N N 1.141  3.642  18.472 -1.988  -4.882 0.589  O1N 3Y0 3  
3Y0 O3  O3  O 0 1 N N N N N N -1.301 3.121  18.242 -3.300  -2.888 -0.233 O3  3Y0 4  
3Y0 PA  P2  P 0 1 N N N N N N -2.707 2.337  18.438 -4.727  -2.963 0.509  PA  3Y0 5  
3Y0 O5B O4  O 0 1 N N N N N N -2.759 2.072  20.027 -5.223  -1.474 0.868  O5B 3Y0 6  
3Y0 C5B C1  C 0 1 N N N N N N -2.942 3.162  20.911 -6.407  -1.209 1.623  C5B 3Y0 7  
3Y0 C4B C2  C 0 1 N N R N N N -3.053 2.629  22.332 -6.585  0.302  1.780  C4B 3Y0 8  
3Y0 O4B O5  O 0 1 N N N N N N -3.137 3.743  23.229 -6.925  0.904  0.512  O4B 3Y0 9  
3Y0 C1B C3  C 0 1 N N R N N N -4.310 3.593  24.091 -7.539  2.168  0.843  C1B 3Y0 10 
3Y0 N9A N1  N 0 1 Y N N N N N -4.631 4.973  24.422 -8.354  2.648  -0.276 N9A 3Y0 11 
3Y0 C8A C4  C 0 1 Y N N N N N -5.053 5.967  23.580 -8.908  1.880  -1.257 C8A 3Y0 12 
3Y0 N7A N2  N 0 1 Y N N N N N -5.092 7.130  24.268 -9.568  2.632  -2.090 N7A 3Y0 13 
3Y0 C5A C5  C 0 1 Y N N N N N -4.608 6.884  25.511 -9.481  3.925  -1.696 C5A 3Y0 14 
3Y0 C6A C6  C 0 1 Y N N N N N -4.386 7.689  26.612 -9.977  5.144  -2.190 C6A 3Y0 15 
3Y0 N6A N3  N 0 1 N N N N N N -4.644 9.033  26.617 -10.752 5.181  -3.336 N6A 3Y0 16 
3Y0 N1A N4  N 0 1 Y N N N N N -3.884 7.120  27.716 -9.686  6.260  -1.530 N1A 3Y0 17 
3Y0 C2A C7  C 0 1 Y N N N N N -3.622 5.795  27.757 -8.948  6.234  -0.435 C2A 3Y0 18 
3Y0 N3A N5  N 0 1 Y N N N N N -3.830 4.979  26.720 -8.462  5.117  0.064  N3A 3Y0 19 
3Y0 C4A C8  C 0 1 Y N N N N N -4.323 5.524  25.583 -8.706  3.950  -0.525 C4A 3Y0 20 
3Y0 C2B C9  C 0 1 N N R N N N -5.274 2.817  23.241 -8.431  1.866  2.068  C2B 3Y0 21 
3Y0 O2B O6  O 0 1 N N N N N N -6.229 2.234  24.109 -8.404  2.958  2.988  O2B 3Y0 22 
3Y0 C3B C10 C 0 1 N N S N N N -4.355 1.838  22.513 -7.788  0.610  2.698  C3B 3Y0 23 
3Y0 O3B O7  O 0 1 N N N N N N -4.070 0.675  23.297 -7.346  0.888  4.028  O3B 3Y0 24 
3Y0 O1A O8  O 0 1 N N N N N N -2.636 0.969  17.827 -4.595  -3.752 1.754  O1A 3Y0 25 
3Y0 O2A O9  O 0 1 N N N N N N -3.757 3.346  18.027 -5.800  -3.667 -0.462 O2A 3Y0 26 
3Y0 O5D O10 O 0 1 N N N N N N 0.197  2.131  16.608 -0.764  -3.208 -0.851 O5D 3Y0 27 
3Y0 C5D C11 C 0 1 N N N N N N 1.359  1.562  16.007 0.468   -3.896 -1.074 C5D 3Y0 28 
3Y0 C4D C12 C 0 1 N N R N N N 1.522  2.065  14.586 1.584   -2.878 -1.314 C4D 3Y0 29 
3Y0 C3D C13 C 0 1 N N R N N N 1.812  3.545  14.449 2.893   -3.609 -1.671 C3D 3Y0 30 
3Y0 O3D O11 O 0 1 N N N N N N 3.118  3.934  14.805 3.398   -3.146 -2.926 O3D 3Y0 31 
3Y0 C2D C14 C 0 1 N N R N N N 1.542  3.738  12.965 3.863   -3.233 -0.525 C2D 3Y0 32 
3Y0 C1D C15 C 0 1 N N R N N N 0.276  2.929  12.856 2.886   -2.806 0.600  C1D 3Y0 33 
3Y0 O4D O12 O 0 1 N N N N N N 0.359  1.846  13.765 1.826   -2.126 -0.113 O4D 3Y0 34 
3Y0 S1  S1  S 0 1 N N N N N N 0.097  2.240  11.234 3.703   -1.674 1.759  S1  3Y0 35 
3Y0 O2D O13 O 0 1 N N N N N N 2.620  3.137  12.231 4.708   -2.146 -0.908 O2D 3Y0 36 
3Y0 C1  C16 C 0 1 N N N N N N 3.027  3.661  10.950 5.994   -2.162 -0.284 C1  3Y0 37 
3Y0 C2  C17 C 0 1 N N N N N N 3.218  5.180  10.893 6.808   -0.959 -0.765 C2  3Y0 38 
3Y0 C3  C18 C 0 1 N N N N N N 2.121  5.815  10.056 8.185   -0.976 -0.097 C3  3Y0 39 
3Y0 C4  C19 C 0 1 N N N N N N 2.168  7.335  10.243 9.000   0.226  -0.578 C4  3Y0 40 
3Y0 C5  C20 C 0 1 N N N N N N 0.932  8.012  9.696  10.377  0.209  0.090  C5  3Y0 41 
3Y0 C6  C21 C 0 1 N N N N N N 1.052  9.523  9.800  11.191  1.412  -0.391 C6  3Y0 42 
3Y0 C7  C22 C 0 1 N N N N N N -0.266 10.189 9.406  12.568  1.395  0.276  C7  3Y0 43 
3Y0 C8  C23 C 0 1 N N N N N N -0.092 11.680 9.131  13.383  2.597  -0.204 C8  3Y0 44 
3Y0 C9  C24 C 0 1 N N N N N N 0.270  12.450 10.398 14.759  2.580  0.463  C9  3Y0 45 
3Y0 C10 C25 C 0 1 N N N N N N 0.290  13.973 10.230 15.574  3.783  -0.017 C10 3Y0 46 
3Y0 C11 C26 C 0 1 N N N N N N 0.802  14.637 11.521 16.951  3.766  0.650  C11 3Y0 47 
3Y0 C12 C27 C 0 1 N N N N N N 1.806  15.761 11.282 17.765  4.968  0.170  C12 3Y0 48 
3Y0 C13 C28 C 0 1 N N N N N N 2.802  15.960 12.415 19.142  4.951  0.837  C13 3Y0 49 
3Y0 H1  H1  H 0 1 N N N N N N 0.994  1.386  19.643 -2.705  -4.284 -2.660 H1  3Y0 50 
3Y0 H2  H2  H 0 1 N N N N N N -2.083 3.845  20.839 -7.271  -1.624 1.102  H2  3Y0 51 
3Y0 H3  H3  H 0 1 N N N N N N -3.863 3.702  20.646 -6.321  -1.669 2.607  H3  3Y0 52 
3Y0 H4  H4  H 0 1 N N N N N N -2.189 1.989  22.565 -5.676  0.750  2.183  H4  3Y0 53 
3Y0 H5  H5  H 0 1 N N N N N N -4.057 3.022  24.996 -6.777  2.905  1.099  H5  3Y0 54 
3Y0 H6  H6  H 0 1 N N N N N N -5.312 5.842  22.539 -8.812  0.807  -1.333 H6  3Y0 55 
3Y0 H7  H7  H 0 1 N N N N N N -4.402 9.416  27.508 -10.958 4.359  -3.809 H7  3Y0 56 
3Y0 H8  H8  H 0 1 N N N N N N -4.103 9.479  25.904 -11.088 6.028  -3.667 H8  3Y0 57 
3Y0 H9  H9  H 0 1 N N N N N N -3.226 5.376  28.670 -8.735  7.164  0.071  H9  3Y0 58 
3Y0 H10 H10 H 0 1 N N N N N N -5.754 3.485  22.511 -9.453  1.657  1.753  H10 3Y0 59 
3Y0 H11 H11 H 0 1 N N N N N N -6.750 2.918  24.513 -8.947  2.821  3.777  H11 3Y0 60 
3Y0 H12 H12 H 0 1 N N N N N N -4.779 1.574  21.533 -8.493  -0.222 2.696  H12 3Y0 61 
3Y0 H13 H13 H 0 1 N N N N N N -4.867 0.172  23.419 -8.061  1.089  4.647  H13 3Y0 62 
3Y0 H14 H14 H 0 1 N N N N N N -4.316 2.968  17.358 -5.937  -3.203 -1.299 H14 3Y0 63 
3Y0 H15 H15 H 0 1 N N N N N N 1.260  0.467  15.994 0.710   -4.501 -0.200 H15 3Y0 64 
3Y0 H16 H16 H 0 1 N N N N N N 2.245  1.844  16.595 0.371   -4.541 -1.947 H16 3Y0 65 
3Y0 H17 H17 H 0 1 N N N N N N 2.368  1.521  14.140 1.303   -2.203 -2.123 H17 3Y0 66 
3Y0 H18 H18 H 0 1 N N N N N N 1.068  4.113  15.026 2.732   -4.686 -1.700 H18 3Y0 67 
3Y0 H19 H19 H 0 1 N N N N N N 3.246  3.798  15.736 2.802   -3.303 -3.671 H19 3Y0 68 
3Y0 H20 H20 H 0 1 N N N N N N 1.381  4.796  12.712 4.456   -4.095 -0.219 H20 3Y0 69 
3Y0 H21 H21 H 0 1 N N N N N N -0.605 3.560  13.045 2.498   -3.679 1.124  H21 3Y0 70 
3Y0 H22 H22 H 0 1 N N N N N N -1.026 1.594  11.337 2.735   -1.407 2.654  H22 3Y0 71 
3Y0 H23 H23 H 0 1 N N N N N N 2.259  3.387  10.212 5.874   -2.110 0.798  H23 3Y0 72 
3Y0 H24 H24 H 0 1 N N N N N N 3.982  3.188  10.678 6.514   -3.082 -0.549 H24 3Y0 73 
3Y0 H25 H25 H 0 1 N N N N N N 4.196  5.407  10.443 6.929   -1.011 -1.847 H25 3Y0 74 
3Y0 H26 H26 H 0 1 N N N N N N 3.180  5.590  11.913 6.288   -0.039 -0.501 H26 3Y0 75 
3Y0 H27 H27 H 0 1 N N N N N N 1.142  5.434  10.381 8.065   -0.925 0.985  H27 3Y0 76 
3Y0 H28 H28 H 0 1 N N N N N N 2.277  5.569  8.995  8.706   -1.897 -0.362 H28 3Y0 77 
3Y0 H29 H29 H 0 1 N N N N N N 3.051  7.730  9.719  9.120   0.175  -1.660 H29 3Y0 78 
3Y0 H30 H30 H 0 1 N N N N N N 2.249  7.558  11.317 8.479   1.147  -0.314 H30 3Y0 79 
3Y0 H31 H31 H 0 1 N N N N N N 0.055  7.680  10.271 10.256  0.261  1.172  H31 3Y0 80 
3Y0 H32 H32 H 0 1 N N N N N N 0.806  7.732  8.640  10.897  -0.711 -0.175 H32 3Y0 81 
3Y0 H33 H33 H 0 1 N N N N N N 1.850  9.871  9.127  11.311  1.360  -1.473 H33 3Y0 82 
3Y0 H34 H34 H 0 1 N N N N N N 1.301  9.797  10.836 10.671  2.332  -0.127 H34 3Y0 83 
3Y0 H35 H35 H 0 1 N N N N N N -0.988 10.061 10.226 12.448  1.446  1.359  H35 3Y0 84 
3Y0 H36 H36 H 0 1 N N N N N N -0.652 9.703  8.498  13.088  0.474  0.012  H36 3Y0 85 
3Y0 H37 H37 H 0 1 N N N N N N 0.710  11.815 8.391  13.503  2.546  -1.286 H37 3Y0 86 
3Y0 H38 H38 H 0 1 N N N N N N -1.034 12.080 8.728  12.862  3.518  0.060  H38 3Y0 87 
3Y0 H39 H39 H 0 1 N N N N N N -0.467 12.199 11.175 14.639  2.632  1.546  H39 3Y0 88 
3Y0 H40 H40 H 0 1 N N N N N N 1.270  12.127 10.723 15.280  1.660  0.199  H40 3Y0 89 
3Y0 H41 H41 H 0 1 N N N N N N 0.955  14.239 9.395  15.694  3.731  -1.099 H41 3Y0 90 
3Y0 H42 H42 H 0 1 N N N N N N -0.728 14.330 10.016 15.053  4.703  0.247  H42 3Y0 91 
3Y0 H43 H43 H 0 1 N N N N N N -0.061 15.053 12.062 16.830  3.817  1.732  H43 3Y0 92 
3Y0 H44 H44 H 0 1 N N N N N N 1.286  13.866 12.139 17.471  2.845  0.386  H44 3Y0 93 
3Y0 H45 H45 H 0 1 N N N N N N 2.368  15.532 10.365 17.885  4.917  -0.912 H45 3Y0 94 
3Y0 H46 H46 H 0 1 N N N N N N 1.248  16.699 11.145 17.245  5.889  0.434  H46 3Y0 95 
3Y0 H47 H47 H 0 1 N N N N N N 3.485  16.785 12.163 19.722  5.808  0.495  H47 3Y0 96 
3Y0 H48 H48 H 0 1 N N N N N N 2.260  16.203 13.341 19.022  5.003  1.919  H48 3Y0 97 
3Y0 H49 H49 H 0 1 N N N N N N 3.381  15.036 12.561 19.662  4.031  0.573  H49 3Y0 98 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3Y0 C8  C7  SING N N 1   
3Y0 C8  C9  SING N N 2   
3Y0 C7  C6  SING N N 3   
3Y0 C5  C6  SING N N 4   
3Y0 C5  C4  SING N N 5   
3Y0 C3  C4  SING N N 6   
3Y0 C3  C2  SING N N 7   
3Y0 C10 C9  SING N N 8   
3Y0 C10 C11 SING N N 9   
3Y0 C2  C1  SING N N 10  
3Y0 C1  O2D SING N N 11  
3Y0 S1  C1D SING N N 12  
3Y0 C12 C11 SING N N 13  
3Y0 C12 C13 SING N N 14  
3Y0 O2D C2D SING N N 15  
3Y0 C1D C2D SING N N 16  
3Y0 C1D O4D SING N N 17  
3Y0 C2D C3D SING N N 18  
3Y0 O4D C4D SING N N 19  
3Y0 C3D C4D SING N N 20  
3Y0 C3D O3D SING N N 21  
3Y0 C4D C5D SING N N 22  
3Y0 C5D O5D SING N N 23  
3Y0 O5D PN  SING N N 24  
3Y0 O1A PA  DOUB N N 25  
3Y0 O2A PA  SING N N 26  
3Y0 PN  O3  SING N N 27  
3Y0 PN  O1N DOUB N N 28  
3Y0 PN  O2N SING N N 29  
3Y0 O3  PA  SING N N 30  
3Y0 PA  O5B SING N N 31  
3Y0 O5B C5B SING N N 32  
3Y0 C5B C4B SING N N 33  
3Y0 C4B C3B SING N N 34  
3Y0 C4B O4B SING N N 35  
3Y0 C3B C2B SING N N 36  
3Y0 C3B O3B SING N N 37  
3Y0 O4B C1B SING N N 38  
3Y0 C2B C1B SING N N 39  
3Y0 C2B O2B SING N N 40  
3Y0 C8A N7A DOUB Y N 41  
3Y0 C8A N9A SING Y N 42  
3Y0 C1B N9A SING N N 43  
3Y0 N7A C5A SING Y N 44  
3Y0 N9A C4A SING Y N 45  
3Y0 C5A C4A DOUB Y N 46  
3Y0 C5A C6A SING Y N 47  
3Y0 C4A N3A SING Y N 48  
3Y0 C6A N6A SING N N 49  
3Y0 C6A N1A DOUB Y N 50  
3Y0 N3A C2A DOUB Y N 51  
3Y0 N1A C2A SING Y N 52  
3Y0 O2N H1  SING N N 53  
3Y0 C5B H2  SING N N 54  
3Y0 C5B H3  SING N N 55  
3Y0 C4B H4  SING N N 56  
3Y0 C1B H5  SING N N 57  
3Y0 C8A H6  SING N N 58  
3Y0 N6A H7  SING N N 59  
3Y0 N6A H8  SING N N 60  
3Y0 C2A H9  SING N N 61  
3Y0 C2B H10 SING N N 62  
3Y0 O2B H11 SING N N 63  
3Y0 C3B H12 SING N N 64  
3Y0 O3B H13 SING N N 65  
3Y0 O2A H14 SING N N 66  
3Y0 C5D H15 SING N N 67  
3Y0 C5D H16 SING N N 68  
3Y0 C4D H17 SING N N 69  
3Y0 C3D H18 SING N N 70  
3Y0 O3D H19 SING N N 71  
3Y0 C2D H20 SING N N 72  
3Y0 C1D H21 SING N N 73  
3Y0 S1  H22 SING N N 74  
3Y0 C1  H23 SING N N 75  
3Y0 C1  H24 SING N N 76  
3Y0 C2  H25 SING N N 77  
3Y0 C2  H26 SING N N 78  
3Y0 C3  H27 SING N N 79  
3Y0 C3  H28 SING N N 80  
3Y0 C4  H29 SING N N 81  
3Y0 C4  H30 SING N N 82  
3Y0 C5  H31 SING N N 83  
3Y0 C5  H32 SING N N 84  
3Y0 C6  H33 SING N N 85  
3Y0 C6  H34 SING N N 86  
3Y0 C7  H35 SING N N 87  
3Y0 C7  H36 SING N N 88  
3Y0 C8  H37 SING N N 89  
3Y0 C8  H38 SING N N 90  
3Y0 C9  H39 SING N N 91  
3Y0 C9  H40 SING N N 92  
3Y0 C10 H41 SING N N 93  
3Y0 C10 H42 SING N N 94  
3Y0 C11 H43 SING N N 95  
3Y0 C11 H44 SING N N 96  
3Y0 C12 H45 SING N N 97  
3Y0 C12 H46 SING N N 98  
3Y0 C13 H47 SING N N 99  
3Y0 C13 H48 SING N N 100 
3Y0 C13 H49 SING N N 101 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3Y0 SMILES           ACDLabs              12.01 "O=P(OCC3OC(n1c2ncnc(N)c2nc1)C(O)C3O)(O)OP(=O)(O)OCC4OC(S)C(OCCCCCCCCCCCCC)C4O"                                                                                                                                                                                                                 
3Y0 InChI            InChI                1.03  "InChI=1S/C28H49N5O13P2S/c1-2-3-4-5-6-7-8-9-10-11-12-13-41-24-22(35)19(45-28(24)49)15-43-48(39,40)46-47(37,38)42-14-18-21(34)23(36)27(44-18)33-17-32-20-25(29)30-16-31-26(20)33/h16-19,21-24,27-28,34-36,49H,2-15H2,1H3,(H,37,38)(H,39,40)(H2,29,30,31)/t18-,19-,21-,22-,23-,24-,27-,28-/m1/s1" 
3Y0 InChIKey         InChI                1.03  VSVPTUFDWKYDGH-VBLNILRESA-N                                                                                                                                                                                                                                                                     
3Y0 SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCO[C@H]1[C@@H](S)O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)[C@H]1O"                                                                                                                                                                           
3Y0 SMILES           CACTVS               3.385 "CCCCCCCCCCCCCO[CH]1[CH](S)O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)[CH]1O"                                                                                                                                                                                     
3Y0 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCO[C@@H]1[C@@H]([C@H](O[C@@H]1S)COP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O)O"                                                                                                                                                                            
3Y0 SMILES           "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCOC1C(C(OC1S)COP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O)O"                                                                                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3Y0 "SYSTEMATIC NAME" ACDLabs              12.01 "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R,5R)-3-hydroxy-5-sulfanyl-4-(tridecyloxy)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
3Y0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4R,5R)-3-oxidanyl-5-sulfanyl-4-tridecoxy-oxolan-2-yl]methyl hydrogen phosphate"                       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3Y0 "Create component" 2014-12-09 PDBJ 
3Y0 "Initial release"  2016-01-13 RCSB 
3Y0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            3Y0 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
