data_0H0
#

_chem_comp.id                                   0H0
_chem_comp.name                                 "Carbohydrate component from a pentavalent N-acetylneuraminic acid conjugate"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C15 H27 N O9"
_chem_comp.mon_nstd_parent_comp_id              SIA
_chem_comp.pdbx_synonyms                        "(1R,2R)-1-[(2R,3R,4S,6R)-6-[bis(oxidanyl)methyl]-3-(1-hydroxyethylamino)-4-oxidanyl-6-propoxy-oxan-2-yl]propane-1,2,3-triol; (2R,4S,5R,6R)-5-acetamido-2-butoxy-4-oxidanyl-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-06-05
_chem_comp.pdbx_modified_date                   2021-10-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       365.376
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0H0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7OJ7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0H0  O2   O1   O  0  1  N  N  N  250.202  183.967  312.978  -2.542   0.720   0.823  O2   0H0   1  
0H0  C12  C1   C  0  1  N  N  N  250.464  184.514  314.294  -3.027   0.707  -0.521  C12  0H0   2  
0H0  C13  C2   C  0  1  N  N  N  251.295  183.464  315.158  -4.545   0.516  -0.514  C13  0H0   3  
0H0  C14  C3   C  0  1  N  N  N  250.695  183.267  316.580  -5.064   0.502  -1.953  C14  0H0   4  
0H0  C1   C4   C  0  1  N  N  N  248.102  185.108  312.621  -0.717   0.711   2.379  C1   0H0   5  
0H0  C2   C5   C  0  1  N  N  R  249.472  184.794  312.016  -1.118   0.772   0.927  C2   0H0   6  
0H0  C3   C6   C  0  1  N  N  N  249.335  184.060  310.684  -0.609   2.079   0.312  C3   0H0   7  
0H0  C4   C7   C  0  1  N  N  S  248.970  184.974  309.548   0.922   2.100   0.373  C4   0H0   8  
0H0  C5   C8   C  0  1  N  N  R  249.947  186.095  309.429   1.468   0.865  -0.350  C5   0H0   9  
0H0  C6   C9   C  0  1  N  N  R  249.815  186.911  310.702   0.878  -0.394   0.290  C6   0H0  10  
0H0  C7   C10  C  0  1  N  N  R  250.607  188.211  310.761   1.372  -1.630  -0.465  C7   0H0  11  
0H0  C8   C11  C  0  1  N  N  R  250.564  188.790  312.193   0.687  -2.878   0.096  C8   0H0  12  
0H0  C9   C12  C  0  1  N  N  N  250.660  190.329  312.181   1.181  -4.113  -0.660  C9   0H0  13  
0H0  C10  C13  C  0  1  N  N  N  250.389  186.980  307.001   3.687   1.524  -1.110  C10  0H0  14  
0H0  C11  C14  C  0  1  N  N  N  249.841  187.863  305.837   5.189   1.494  -0.991  C11  0H0  15  
0H0  N5   N1   N  0  1  N  N  N  249.584  186.911  308.215   2.928   0.836  -0.235  N5   0H0  16  
0H0  O1A  O2   O  0  1  N  N  N  247.764  186.318  312.872  -1.559   0.562   3.232  O1A  0H0  17  
0H0  O1B  O3   O  0  1  N  N  N  247.305  184.161  312.928   0.575   0.822   2.723  O1B  0H0  18  
0H0  O4   O4   O  0  1  N  N  N  248.861  184.271  308.268   1.409   3.282  -0.265  O4   0H0  19  
0H0  O6   O5   O  0  1  N  N  N  250.218  186.072  311.853  -0.548  -0.336   0.228  O6   0H0  20  
0H0  O7   O6   O  0  1  N  N  N  251.932  187.949  310.370   1.059  -1.497  -1.852  O7   0H0  21  
0H0  O8   O7   O  0  1  N  N  N  249.373  188.469  312.872   1.000  -3.010   1.484  O8   0H0  22  
0H0  O9   O8   O  0  1  N  N  N  251.916  190.661  311.674   0.457  -5.263  -0.217  O9   0H0  23  
0H0  O10  O9   O  0  1  N  N  N  251.417  186.381  306.912   3.162   2.168  -1.994  O10  0H0  24  
0H0  C15  C15  C  0  1  N  N  N        ?        ?        ?  -6.582   0.310  -1.946  C15  0H0  25  
0H0  H1   H1   H  0  1  N  N  N  251.042  185.444  314.194  -2.782   1.653  -1.004  H1   0H0  26  
0H0  H2   H2   H  0  1  N  N  N  249.510  184.728  314.798  -2.560  -0.111  -1.068  H2   0H0  27  
0H0  H3   H3   H  0  1  N  N  N  251.294  182.496  314.636  -4.789  -0.430  -0.031  H3   0H0  28  
0H0  H4   H4   H  0  1  N  N  N  252.329  183.826  315.257  -5.012   1.334   0.033  H4   0H0  29  
0H0  H5   H5   H  0  1  N  N  N  251.219  182.607  317.287  -4.819   1.448  -2.436  H5   0H0  30  
0H0  H6   H6   H  0  1  N  N  N  250.309  184.146  317.116  -4.596  -0.317  -2.500  H6   0H0  31  
0H0  H7   H7   H  0  1  N  N  N  250.294  183.575  310.450  -0.933   2.143  -0.727  H7   0H0  32  
0H0  H8   H8   H  0  1  N  N  N  248.552  183.294  310.784  -1.008   2.925   0.872  H8   0H0  33  
0H0  H9   H9   H  0  1  N  N  N  247.988  185.412  309.779   1.245   2.086   1.413  H9   0H0  34  
0H0  H10  H10  H  0  1  N  N  N  250.971  185.705  309.334   1.186   0.905  -1.403  H10  0H0  35  
0H0  H11  H11  H  0  1  N  N  N  248.752  187.166  310.823   1.195  -0.454   1.332  H11  0H0  36  
0H0  H12  H12  H  0  1  N  N  N  250.143  188.938  310.078   2.451  -1.722  -0.343  H12  0H0  37  
0H0  H13  H13  H  0  1  N  N  N  251.429  188.397  312.747  -0.392  -2.785  -0.026  H13  0H0  38  
0H0  H14  H14  H  0  1  N  N  N  249.872  190.751  311.540   1.022  -3.973  -1.729  H14  0H0  39  
0H0  H15  H15  H  0  1  N  N  N  250.551  190.721  313.203   2.244  -4.257  -0.466  H15  0H0  40  
0H0  H16  H16  H  0  1  N  N  N  250.538  187.824  304.987   5.541   0.467  -1.088  H16  0H0  41  
0H0  H17  H17  H  0  1  N  N  N  248.857  187.485  305.522   5.628   2.105  -1.780  H17  0H0  42  
0H0  H18  H18  H  0  1  N  N  N  249.741  188.903  306.182   5.485   1.889  -0.019  H18  0H0  43  
0H0  H19  H19  H  0  1  N  N  N  248.736  187.440  308.244   3.348   0.321   0.472  H19  0H0  44  
0H0  H20  H20  H  0  1  N  N  N  246.522  184.522  313.326   0.784   0.777   3.667  H20  0H0  45  
0H0  H21  H21  H  0  1  N  N  N  248.630  184.890  307.585   1.096   4.104   0.137  H21  0H0  46  
0H0  H22  H22  H  0  1  N  N  N  252.437  188.753  310.403   0.113  -1.409  -2.036  H22  0H0  47  
0H0  H23  H23  H  0  1  N  N  N  249.085  187.601  312.614   1.946  -3.098   1.666  H23  0H0  48  
0H0  H24  H24  H  0  1  N  N  N  252.010  191.606  311.652   0.718  -6.085  -0.654  H24  0H0  49  
0H0  H25  H25  H  0  1  N  N  N        ?        ?        ?  -6.826  -0.636  -1.463  H25  0H0  50  
0H0  H26  H26  H  0  1  N  N  N        ?        ?        ?  -7.049   1.129  -1.399  H26  0H0  51  
0H0  H27  H27  H  0  1  N  N  N        ?        ?        ?  -6.951   0.301  -2.971  H27  0H0  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0H0  O2   C12  SING  N  N   1  
0H0  O2   C2   SING  N  N   2  
0H0  C12  C13  SING  N  N   3  
0H0  C13  C14  SING  N  N   4  
0H0  C2   C3   SING  N  N   5  
0H0  C2   O6   SING  N  N   6  
0H0  C3   C4   SING  N  N   7  
0H0  C4   C5   SING  N  N   8  
0H0  C4   O4   SING  N  N   9  
0H0  C5   C6   SING  N  N  10  
0H0  C5   N5   SING  N  N  11  
0H0  C6   C7   SING  N  N  12  
0H0  C6   O6   SING  N  N  13  
0H0  C7   C8   SING  N  N  14  
0H0  C7   O7   SING  N  N  15  
0H0  C8   C9   SING  N  N  16  
0H0  C8   O8   SING  N  N  17  
0H0  C9   O9   SING  N  N  18  
0H0  C10  C11  SING  N  N  19  
0H0  C10  N5   SING  N  N  20  
0H0  C10  O10  DOUB  N  N  21  
0H0  C2   C1   SING  N  N  22  
0H0  C1   O1A  DOUB  N  N  23  
0H0  C1   O1B  SING  N  N  24  
0H0  C14  C15  SING  N  N  25  
0H0  C12  H1   SING  N  N  26  
0H0  C12  H2   SING  N  N  27  
0H0  C13  H3   SING  N  N  28  
0H0  C13  H4   SING  N  N  29  
0H0  C14  H5   SING  N  N  30  
0H0  C14  H6   SING  N  N  31  
0H0  C3   H7   SING  N  N  32  
0H0  C3   H8   SING  N  N  33  
0H0  C4   H9   SING  N  N  34  
0H0  C5   H10  SING  N  N  35  
0H0  C6   H11  SING  N  N  36  
0H0  C7   H12  SING  N  N  37  
0H0  C8   H13  SING  N  N  38  
0H0  C9   H14  SING  N  N  39  
0H0  C9   H15  SING  N  N  40  
0H0  C11  H16  SING  N  N  41  
0H0  C11  H17  SING  N  N  42  
0H0  C11  H18  SING  N  N  43  
0H0  N5   H19  SING  N  N  44  
0H0  O1B  H20  SING  N  N  45  
0H0  O4   H21  SING  N  N  46  
0H0  O7   H22  SING  N  N  47  
0H0  O8   H23  SING  N  N  48  
0H0  O9   H24  SING  N  N  49  
0H0  C15  H25  SING  N  N  50  
0H0  C15  H26  SING  N  N  51  
0H0  C15  H27  SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0H0  InChI             InChI                 1.03   "InChI=1S/C15H27NO9/c1-3-4-5-24-15(14(22)23)6-9(19)11(16-8(2)18)13(25-15)12(21)10(20)7-17/h9-13,17,19-21H,3-7H2,1-2H3,(H,16,18)(H,22,23)/t9-,10+,11+,12+,13+,15+/m0/s1"  
0H0  InChIKey          InChI                 1.03   HDYHZAZYSDVKLZ-FSTWUICMSA-N  
0H0  SMILES_CANONICAL  CACTVS                3.385  "CCCCO[C@@]1(C[C@H](O)[C@@H](NC(C)=O)[C@@H](O1)[C@H](O)[C@H](O)CO)C(O)=O"  
0H0  SMILES            CACTVS                3.385  "CCCCO[C]1(C[CH](O)[CH](NC(C)=O)[CH](O1)[CH](O)[CH](O)CO)C(O)=O"  
0H0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCO[C@@]1(C[C@@H]([C@H]([C@@H](O1)[C@@H]([C@@H](CO)O)O)NC(=O)C)O)C(=O)O"  
0H0  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCOC1(CC(C(C(O1)C(C(CO)O)O)NC(=O)C)O)C(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          0H0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R},4~{S},5~{R},6~{R})-5-acetamido-2-butoxy-4-oxidanyl-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  0H0  "(1R,2R)-1-[(2R,3R,4S,6R)-6-[bis(oxidanyl)methyl]-3-(1-hydroxyethylamino)-4-oxidanyl-6-propoxy-oxan-2-yl]propane-1,2,3-triol"  PDB  ?  
2  0H0  "(2R,4S,5R,6R)-5-acetamido-2-butoxy-4-oxidanyl-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid"                  PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0H0  "Create component"  2021-06-05  PDBE  
0H0  "Modify synonyms"   2021-06-05  PDBE  
0H0  "Initial release"   2021-10-13  RCSB  
##
