data_PRD_002521
# 
_pdbx_reference_molecule.prd_id                       PRD_002521 
_pdbx_reference_molecule.name                         "YBX-YC3-VAL-PRO-THR-THR-PHE-MAA-CYS-MN1 inhibitor" 
_pdbx_reference_molecule.represent_as                 polymer 
_pdbx_reference_molecule.type                         "Cyclic peptide" 
_pdbx_reference_molecule.type_evidence_code           ? 
_pdbx_reference_molecule.class                        Inhibitor 
_pdbx_reference_molecule.class_evidence_code          ? 
_pdbx_reference_molecule.formula                      "C60 H81 N9 O13 S3" 
_pdbx_reference_molecule.formula_weight               1232.533 
_pdbx_reference_molecule.chem_comp_id                 ? 
_pdbx_reference_molecule.release_status               REL 
_pdbx_reference_molecule.replaces                     ? 
_pdbx_reference_molecule.replaced_by                  ? 
_pdbx_reference_molecule.compound_details             ? 
_pdbx_reference_molecule.description                  ? 
_pdbx_reference_molecule.representative_PDB_id_code   8FVL 
# 
_pdbx_reference_entity_list.prd_id          PRD_002521 
_pdbx_reference_entity_list.ref_entity_id   1 
_pdbx_reference_entity_list.component_id    1 
_pdbx_reference_entity_list.type            polymer 
_pdbx_reference_entity_list.details         . 
# 
loop_
_pdbx_reference_entity_poly_link.prd_id 
_pdbx_reference_entity_poly_link.ref_entity_id 
_pdbx_reference_entity_poly_link.link_id 
_pdbx_reference_entity_poly_link.atom_id_1 
_pdbx_reference_entity_poly_link.comp_id_1 
_pdbx_reference_entity_poly_link.entity_seq_num_1 
_pdbx_reference_entity_poly_link.atom_id_2 
_pdbx_reference_entity_poly_link.comp_id_2 
_pdbx_reference_entity_poly_link.entity_seq_num_2 
_pdbx_reference_entity_poly_link.value_order 
_pdbx_reference_entity_poly_link.component_id 
_pdbx_reference_entity_poly_link.details 
_pdbx_reference_entity_poly_link.insert_code_1 
_pdbx_reference_entity_poly_link.insert_code_2 
PRD_002521 1 1  C5 YBX 1 N  YC3 2  sing 1 ? ? ? 
PRD_002521 1 2  C  YC3 2 N  VAL 3  sing 1 ? ? ? 
PRD_002521 1 3  S2 YC3 2 SG CYS 9  sing 1 ? ? ? 
PRD_002521 1 4  C  VAL 3 N  PRO 4  sing 1 ? ? ? 
PRD_002521 1 5  C  PRO 4 N  THR 5  sing 1 ? ? ? 
PRD_002521 1 6  C  THR 5 N  THR 6  sing 1 ? ? ? 
PRD_002521 1 7  C  THR 6 N  PHE 7  sing 1 ? ? ? 
PRD_002521 1 8  C  PHE 7 N  MAA 8  sing 1 ? ? ? 
PRD_002521 1 9  C  MAA 8 N  CYS 9  sing 1 ? ? ? 
PRD_002521 1 10 C  CYS 9 N  MN1 10 sing 1 ? ? ? 
# 
_pdbx_reference_entity_poly.prd_id          PRD_002521 
_pdbx_reference_entity_poly.ref_entity_id   1 
_pdbx_reference_entity_poly.db_code         . 
_pdbx_reference_entity_poly.db_name         . 
_pdbx_reference_entity_poly.type            peptide-like 
# 
_pdbx_reference_entity_sequence.prd_id          PRD_002521 
_pdbx_reference_entity_sequence.ref_entity_id   1 
_pdbx_reference_entity_sequence.type            peptide-like 
_pdbx_reference_entity_sequence.NRP_flag        N 
# 
loop_
_pdbx_reference_entity_poly_seq.prd_id 
_pdbx_reference_entity_poly_seq.ref_entity_id 
_pdbx_reference_entity_poly_seq.num 
_pdbx_reference_entity_poly_seq.mon_id 
_pdbx_reference_entity_poly_seq.parent_mon_id 
_pdbx_reference_entity_poly_seq.hetero 
_pdbx_reference_entity_poly_seq.observed 
PRD_002521 1 1  YBX .   N Y 
PRD_002521 1 2  YC3 PHE N Y 
PRD_002521 1 3  VAL VAL N Y 
PRD_002521 1 4  PRO PRO N Y 
PRD_002521 1 5  THR THR N Y 
PRD_002521 1 6  THR THR N Y 
PRD_002521 1 7  PHE PHE N Y 
PRD_002521 1 8  MAA ALA N Y 
PRD_002521 1 9  CYS CYS N Y 
PRD_002521 1 10 MN1 .   N Y 
# 
loop_
_pdbx_prd_audit.prd_id 
_pdbx_prd_audit.date 
_pdbx_prd_audit.processing_site 
_pdbx_prd_audit.action_type 
PRD_002521 2023-01-23 RCSB "Create molecule"    
PRD_002521 2023-11-03 PDBE "Other modification" 
PRD_002521 2024-10-16 RCSB "Initial release"    
# 
